>gb|AC165971.3| Mus musculus BAC clone RP23-94L17 from chromosome 14, complete sequence
          Length = 211607

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 419    atccaagaagaaaggagggaggg 441
              |||||||||||||||||||||||
Sbjct: 178481 atccaagaagaaaggagggaggg 178459

>emb|CT010577.7| Mouse DNA sequence from clone RP23-318D14 on chromosome 14, complete
              sequence
          Length = 195351

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 419    atccaagaagaaaggagggaggg 441
              |||||||||||||||||||||||
Sbjct: 179055 atccaagaagaaaggagggaggg 179033

>gb|AC119162.12| Mus musculus chromosome 3, clone RP23-231L12, complete sequence
          Length = 201218

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 423    aagaagaaaggagggagggga 443
              |||||||||||||||||||||
Sbjct: 183672 aagaagaaaggagggagggga 183652



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    aagaagaaaggagggagggg 442
              ||||||||||||||||||||
Sbjct: 183736 aagaagaaaggagggagggg 183717

>gb|AC159281.3| Mus musculus BAC clone RP23-321H9 from chromosome 3, complete sequence
          Length = 229114

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 423    aagaagaaaggagggagggga 443
              |||||||||||||||||||||
Sbjct: 142973 aagaagaaaggagggagggga 142993



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    aagaagaaaggagggagggg 442
              ||||||||||||||||||||
Sbjct: 142909 aagaagaaaggagggagggg 142928

>gb|AC022196.7|AC022196 Homo sapiens, clone RP11-27M9, complete sequence
          Length = 93775

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 318  tcaccaccacccctccaccaa 338
            |||||||||||||||||||||
Sbjct: 2501 tcaccaccacccctccaccaa 2481

>gb|AC109195.27| Mus musculus chromosome 15, clone RP24-212B11, complete sequence
          Length = 168270

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 314   ctgctcaccaccacccctccacca 337
             |||||||||||||||| |||||||
Sbjct: 65000 ctgctcaccaccacccatccacca 64977

>gb|AC097117.12| Rattus norvegicus 1 BAC CH230-36C10 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 197926

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    tcaccaccacccctccacca 337
              ||||||||||||||||||||
Sbjct: 140977 tcaccaccacccctccacca 140958

>gb|AC008334.8| Drosophila melanogaster clone BACR08K05, complete sequence
          Length = 154336

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   ttcagctagctagctgctcaccac 324
             |||||| |||||||||||||||||
Sbjct: 41066 ttcagccagctagctgctcaccac 41043

>gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, complete sequence
          Length = 173479

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    gaagaaaggagggaggggat 444
              ||||||||||||||||||||
Sbjct: 105493 gaagaaaggagggaggggat 105512

>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    caagaagaaaggagggaggg 441
              ||||||||||||||||||||
Sbjct: 202926 caagaagaaaggagggaggg 202945

>gb|AC121878.1| Mus musculus BAC clone RP24-131C8 from 5, complete sequence
          Length = 163985

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   caagaagaaaggagggaggg 441
             ||||||||||||||||||||
Sbjct: 59397 caagaagaaaggagggaggg 59416

>gb|U39677.1| Caenorhabditis elegans cosmid C16E9, complete sequence
          Length = 31124

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   cctcgtcgtgcatgcactaa 232
             ||||||||||||||||||||
Sbjct: 25159 cctcgtcgtgcatgcactaa 25178

>emb|AL391122.9| Human DNA sequence from clone RP11-122A8 on chromosome 13 Contains the
             5' end of the gene for zizimin1, a ribosomal protein S6
             (RPS6) pseudogene, a pseudogene similar to part of
             glyceraldehyde-3-phosphate dehydrogenase (GAPD) and a CpG
             island, complete sequence
          Length = 173336

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   ccaagaagaaaggagggagg 440
             ||||||||||||||||||||
Sbjct: 82743 ccaagaagaaaggagggagg 82724

>emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on chromosome 6, complete
             sequence
          Length = 175757

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   aagaagaaaggagggagggg 442
             ||||||||||||||||||||
Sbjct: 51038 aagaagaaaggagggagggg 51019

>gb|AC091616.2| Rattus norvegicus strain Brown Norway clone RP31-153J8, complete
             sequence
          Length = 125026

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   agaagaaaggagggagggga 443
             ||||||||||||||||||||
Sbjct: 16306 agaagaaaggagggagggga 16325

>gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, complete sequence
          Length = 192063

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 418    tatccaagaagaaaggagggaggg 441
              |||||||||||||| |||||||||
Sbjct: 165237 tatccaagaagaaaagagggaggg 165260

>gb|AC154524.2| Mus musculus BAC clone RP24-68D23 from chromosome 16, complete sequence
          Length = 252926

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    ctccaccaagtggagagaaa 349
              ||||||||||||||||||||
Sbjct: 162138 ctccaccaagtggagagaaa 162119

>gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complete sequence
          Length = 168448

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   aagaagaaaggagggagggg 442
             ||||||||||||||||||||
Sbjct: 60410 aagaagaaaggagggagggg 60429

>gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 of 74 of the complete
              sequence
          Length = 299868

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 301    ttcagctagctagctgctcaccac 324
              |||||| |||||||||||||||||
Sbjct: 225615 ttcagccagctagctgctcaccac 225592

>gb|AC113207.8| Mus musculus chromosome 10, clone RP23-323O18, complete sequence
          Length = 237187

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    caagaagaaaggagggaggg 441
              ||||||||||||||||||||
Sbjct: 149983 caagaagaaaggagggaggg 150002

>emb|AL691416.9| Mouse DNA sequence from clone RP23-110I8 on chromosome 2, complete
              sequence
          Length = 208363

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 424    agaagaaaggagggagggga 443
              ||||||||||||||||||||
Sbjct: 186841 agaagaaaggagggagggga 186860


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,011,655
Number of Sequences: 3902068
Number of extensions: 4011655
Number of successful extensions: 82209
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82163
Number of HSP's gapped (non-prelim): 46
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)