Clone Name | rbart21c10 |
---|---|
Clone Library Name | barley_pub |
>gb|AY109697.1| Zea mays CL14781_1 mRNA sequence Length = 769 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 306 cctagttcttttttgggtattctcttgcaccaaatatggttgatccaaccctgacatttg 365 |||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||| Sbjct: 221 cctagttcttctttgggtattctcttgcaccaaatatggttgacccaactcttacatttg 280 Query: 366 tgctgcccatttcaatcgcctgctcaaaatcggcagacatgcccattgacagctcgcact 425 |||| |||||||||||||| || |||||||| || ||||||||||| |||| ||||||| Sbjct: 281 tgcttcccatttcaatcgcttgttcaaaatcagccgacatgcccatagacaattcgcact 340 Query: 426 gctcttccggtattccaagttcatcacatacctccttccggcaactagtcaatgccttga 485 ||||||| ||||||||||| || | || ||||| | |||||| ||| || ||||||| Sbjct: 341 gctcttcgggtattccaagctccttgcacacctcttcccggcagttagccagcgccttga 400 Query: 486 aattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 401 aattctcaggggttgaggagtaatcaagcatcccaattgtcatc 444
>emb|AJ441305.1|OSA441305 Oryza sativa partial mRNA for putative proline synthetase associated protein Length = 660 Score = 133 bits (67), Expect = 6e-28 Identities = 140/164 (85%), Gaps = 1/164 (0%) Strand = Plus / Minus Query: 366 tgctgcccatttcaatcgcctgctcaaaatcggcagacatgcccattgacagctcgcact 425 |||| |||||| ||||||| ||||||||||| ||||||||||| || ||||| || |||| Sbjct: 660 tgcttcccattncaatcgcttgctcaaaatcagcagacatgcc-atagacagttcacact 602 Query: 426 gctcttccggtattccaagttcatcacatacctccttccggcaactagtcaatgccttga 485 |||| | | |||||||| || | || ||||| ||||||||| ||| || |||||||| Sbjct: 601 gctcntgtgnaattccaagctccttgcacacctctttccggcaattagccagtgccttga 542 Query: 486 aattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 541 aattctctggagttgaggagtaatcaagcatccctattgtcatc 498
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 304 atcctagttcttttttgggtattctcttgcaccaaatatggttgatccaaccctgacatt 363 |||||| ||||| |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 80760 atcctaattcttctttgggtattctcttgcaccaaatatagtcgatccaactctaacatt 80819 Query: 364 tgtgctgcccatttcaatc 382 |||||| |||||||||||| Sbjct: 80820 tgtgcttcccatttcaatc 80838 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 480 ccttgaaattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 81101 ccttgaaattctctggagttgaggagtaatcaagcatccctattgtcatc 81150 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 386 tgctcaaaatcggcagacatgcccattgacagctcgcactgctcttccggtattccaagt 445 ||||||||||| |||||||||||||| ||||| || |||||||| || || |||||||| Sbjct: 80924 tgctcaaaatcagcagacatgcccatagacagttcacactgctcctctggaattccaagc 80983 Query: 446 tcatcacatacctccttccggcaactagtcaatgcct 482 || | || ||||| ||||||||| ||| || ||||| Sbjct: 80984 tccttgcacacctctttccggcaattagccagtgcct 81020
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 304 atcctagttcttttttgggtattctcttgcaccaaatatggttgatccaaccctgacatt 363 |||||| ||||| |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 65138 atcctaattcttctttgggtattctcttgcaccaaatatagtcgatccaactctaacatt 65079 Query: 364 tgtgctgcccatttcaatc 382 |||||| |||||||||||| Sbjct: 65078 tgtgcttcccatttcaatc 65060 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 480 ccttgaaattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 64797 ccttgaaattctctggagttgaggagtaatcaagcatccctattgtcatc 64748 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 386 tgctcaaaatcggcagacatgcccattgacagctcgcactgctcttccggtattccaagt 445 ||||||||||| |||||||||||||| ||||| || |||||||| || || |||||||| Sbjct: 64974 tgctcaaaatcagcagacatgcccatagacagttcacactgctcctctggaattccaagc 64915 Query: 446 tcatcacatacctccttccggcaactagtcaatgcct 482 || | || ||||| ||||||||| ||| || ||||| Sbjct: 64914 tccttgcacacctctttccggcaattagccagtgcct 64878
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 304 atcctagttcttttttgggtattctcttgcaccaaatatggttgatccaaccctgacatt 363 |||||| ||||| |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 2802434 atcctaattcttctttgggtattctcttgcaccaaatatagtcgatccaactctaacatt 2802493 Query: 364 tgtgctgcccatttcaatc 382 |||||| |||||||||||| Sbjct: 2802494 tgtgcttcccatttcaatc 2802512 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 480 ccttgaaattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 2802775 ccttgaaattctctggagttgaggagtaatcaagcatccctattgtcatc 2802824 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 386 tgctcaaaatcggcagacatgcccattgacagctcgcactgctcttccggtattccaagt 445 ||||||||||| |||||||||||||| ||||| || |||||||| || || |||||||| Sbjct: 2802598 tgctcaaaatcagcagacatgcccatagacagttcacactgctcctctggaattccaagc 2802657 Query: 446 tcatcacatacctccttccggcaactagtcaatgcct 482 || | || ||||| ||||||||| ||| || ||||| Sbjct: 2802658 tccttgcacacctctttccggcaattagccagtgcct 2802694
>gb|BT013081.1| Lycopersicon esculentum clone 114338F, mRNA sequence Length = 1202 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 335 ccaaatatggttgatccaaccctgacatttgtgctgcccatttcaatcgcctgctcaaaa 394 ||||||||||||||||||| || ||||| |||||||||||||| ||||| |||| || Sbjct: 749 ccaaatatggttgatccaattctcacattggtgctgcccatttctatcgctagctcgaag 690 Query: 395 tcggcagacatgcccattgaca 416 || ||||||||||||||||| Sbjct: 689 tcactagacatgcccattgaca 668
>ref|NM_179318.1| Arabidopsis thaliana pyridoxal phosphate binding AT1G11930 transcript variant AT1G11930.2 mRNA, complete cds Length = 1057 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 359 acatttgtgctgcccatttcaatcgcctgctcaaaatcggcagacatgcccattgacagc 418 ||||||||||| |||| |||||| || | ||||| || ||||||| ||||| || ||| Sbjct: 767 acatttgtgcttcccagttcaattgctagttcaaagtcaccagacatccccatagatagc 708 Query: 419 tcgcactgctcttccggtattccaag 444 || || ||||| |||||||||||||| Sbjct: 707 tcacattgctcctccggtattccaag 682 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 481 cttgaaattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||||||||||| ||||| | ||||||| ||| || ||||||||| Sbjct: 645 cttgaaattctctggggttgaagtgtaatcagccatccctattgtcatc 597
>ref|NM_118820.2| Arabidopsis thaliana pyridoxal phosphate binding AT4G26860 mRNA, complete cds Length = 997 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 320 gggtattctcttgcaccaaatatggttgatccaaccctgacatttgtgctgcccatttca 379 ||||| ||||||| || || ||||| || |||||||| ||||| ||||| ||||| ||| Sbjct: 776 gggtactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctca 717 Query: 380 atcgcctgctcaaaatcggcagacatgcccattgacag 417 ||||| |||| || || ||||||||||||| ||||| Sbjct: 716 atcgctagctcgaagtcaccagacatgcccatggacag 679
>gb|AF375405.1| Arabidopsis thaliana AT4g26860/F10M23_200 mRNA, complete cds Length = 922 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 320 gggtattctcttgcaccaaatatggttgatccaaccctgacatttgtgctgcccatttca 379 ||||| ||||||| || || ||||| || |||||||| ||||| ||||| ||||| ||| Sbjct: 751 gggtactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctca 692 Query: 380 atcgcctgctcaaaatcggcagacatgcccattgacag 417 ||||| |||| || || ||||||||||||| ||||| Sbjct: 691 atcgctagctcgaagtcaccagacatgcccatggacag 654
>gb|AY066052.1| Arabidopsis thaliana AT4g26860/F10M23_200 mRNA, complete cds Length = 735 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 320 gggtattctcttgcaccaaatatggttgatccaaccctgacatttgtgctgcccatttca 379 ||||| ||||||| || || ||||| || |||||||| ||||| ||||| ||||| ||| Sbjct: 719 gggtactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctca 660 Query: 380 atcgcctgctcaaaatcggcagacatgcccattgacag 417 ||||| |||| || || ||||||||||||| ||||| Sbjct: 659 atcgctagctcgaagtcaccagacatgcccatggacag 622
>emb|BX815330.1|CNS0ABBG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS52ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1262 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 359 acatttgtgctgcccatttcaatcgcctgctcaaaatcggcagacatgcccattgacagc 418 ||||||||||| |||| |||||| || | ||||| || ||||||| ||||| || ||| Sbjct: 1133 acatttgtgcttcccagttcaattgctagttcaaagtcaccagacatccccatagatagc 1074 Query: 419 tcgcactgctcttccggtattccaag 444 || || ||||| |||||||||||||| Sbjct: 1073 tcacattgctcctccggtattccaag 1048 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 481 cttgaaattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||||||||||| ||||| | ||||||| ||| || ||||||||| Sbjct: 1011 cttgaaattctctggggttgaagtgtaatcagccatccctattgtcatc 963
>emb|BX829131.1|CNS0A3E9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 320 gggtattctcttgcaccaaatatggttgatccaaccctgacatttgtgctgcccatttca 379 ||||| ||||||| || || ||||| || |||||||| ||||| ||||| ||||| ||| Sbjct: 836 gggtactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctca 777 Query: 380 atcgcctgctcaaaatcggcagacatgcccattgacag 417 ||||| |||| || || ||||||||||||| ||||| Sbjct: 776 atcgctagctcgaagtcaccagacatgcccatggacag 739
>gb|AY084753.1| Arabidopsis thaliana clone 11679 mRNA, complete sequence Length = 940 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 320 gggtattctcttgcaccaaatatggttgatccaaccctgacatttgtgctgcccatttca 379 ||||| ||||||| || || ||||| || |||||||| ||||| ||||| ||||| ||| Sbjct: 777 gggtactctcttggtccgaaaatggtggaaccaaccctcacattggtgcttcccatctca 718 Query: 380 atcgcctgctcaaaatcggcagacatgcccattgacag 417 ||||| |||| || || ||||||||||||| ||||| Sbjct: 717 atcgctagctcgaagtcaccagacatgcccatggacag 680
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 18 taatataatgatggaaatcaaag 40 ||||||||||||||||||||||| Sbjct: 98694 taatataatgatggaaatcaaag 98716
>ref|NM_101065.2| Arabidopsis thaliana pyridoxal phosphate binding AT1G11930 transcript variant AT1G11930.1 mRNA, complete cds Length = 1059 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Minus Query: 399 cagacatgcccattgacagctcgcactgctcttccggtattccaag 444 ||||||| ||||| || ||||| || ||||| |||||||||||||| Sbjct: 727 cagacatccccatagatagctcacattgctcctccggtattccaag 682 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 481 cttgaaattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||||||||||| ||||| | ||||||| ||| || ||||||||| Sbjct: 645 cttgaaattctctggggttgaagtgtaatcagccatccctattgtcatc 597
>gb|AC164602.7| Mus musculus chromosome 1, clone RP24-364G11, complete sequence Length = 205889 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 aaatagatacatatttaccacc 255 |||||||||||||||||||||| Sbjct: 78687 aaatagatacatatttaccacc 78708
>gb|AC133179.3| Mus musculus BAC clone RP24-134P14 from chromosome 14, complete sequence Length = 160216 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 tgatgaatcaggtagaaacaat 111 |||||||||||||||||||||| Sbjct: 121166 tgatgaatcaggtagaaacaat 121145
>emb|BX088693.15| Zebrafish DNA sequence from clone CH211-212E22 in linkage group 2, complete sequence Length = 150021 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 cctgacatttgtgctgcccatt 376 |||||||||||||||||||||| Sbjct: 62593 cctgacatttgtgctgcccatt 62614
>emb|AL954324.10| Zebrafish DNA sequence from clone DKEY-35P13 in linkage group 17, complete sequence Length = 69320 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 34750 gacatttgtgctgcccatttca 34771
>emb|CR457459.9| Zebrafish DNA sequence from clone DKEY-25P11 in linkage group 12, complete sequence Length = 206901 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 49950 gacatttgtgctgcccatttca 49929
>emb|BX936363.13| Zebrafish DNA sequence from clone CH211-112P19 in linkage group 11, complete sequence Length = 184849 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 120948 gacatttgtgctgcccatttca 120927
>emb|BX005436.12| Zebrafish DNA sequence from clone DKEY-9A8 in linkage group 6, complete sequence Length = 168549 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 41559 gacatttgtgctgcccatttca 41538
>emb|AL109824.24|HSJ1181N3 Human DNA sequence from clone RP5-1181N3 on chromosome 20 Contains the C20orf110 gene for chromosome 20 open reading frame 110, the NCOA6 gene for the thyroid hormone receptor binding protein (KIAA0181), the 5' end of a novel gene and CpG islands, complete sequence Length = 92196 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 183 cttatttatttatggcacatgt 204 |||||||||||||||||||||| Sbjct: 82131 cttatttatttatggcacatgt 82152
>gb|AC134473.4| Mus musculus BAC clone RP23-190G18 from chromosome 3, complete sequence Length = 212795 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 aacaatatccttatttatttat 195 |||||||||||||||||||||| Sbjct: 94301 aacaatatccttatttatttat 94280
>emb|AL844847.6| Zebrafish DNA sequence from clone DKEY-13A21 in linkage group 11 Contains three novel genes, the opn1lw1 gene for opsin 1 (cone pigments), long-wave-sensitive, 1, a gene for novel protein similar to human and rodent member RAS oncogene family RAB7 (RAB7), a gene for novel protein remotely similar to human host cell factor 1 (VP16-accessory protein) (HCFC1), the opn1sw2 gene for opsin 1 (cone pigments), short-wave-sensitive 1, a gene for novel protein similar to human and mouse CpG binding protein (CGBP), a gene for novel protein similar to vertebrate microphthalmia-associated transcription factor (MITF) and zebrafish transcription factor binding to IGHM enhancer 3a (tfe3a), a gene for novel protein similar to human and rodent catechol-O-methyltransferase (COMT), the flj10613l gene for hypothetical protein FLJ10613-like (H. sapiens), a gene for novel protein similar to human and mouse methyl-CpG binding domain protein 1 (MBD1), a gene for novel protein similar to zebrafish red-sensitive opsin (rdops), a gene for novel protein similar to mouse and human host cell factor C1 (VP16-accessory protein) (HCFC1), a gene for novel protein similar to human and rodent metabotropic glutamate receptors (GRM) and two CpG islands, complete sequence Length = 235174 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 156724 gacatttgtgctgcccatttca 156745
>emb|CR628365.6| Zebrafish DNA sequence from clone CH211-137O16 in linkage group 11, complete sequence Length = 191036 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 132735 gacatttgtgctgcccatttca 132714
>gb|AY116962.1| Arabidopsis thaliana At1g11930/F12F1_20 mRNA, complete cds Length = 774 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Minus Query: 399 cagacatgcccattgacagctcgcactgctcttccggtattccaag 444 ||||||| ||||| || ||||| || ||||| |||||||||||||| Sbjct: 679 cagacatccccatagatagctcacattgctcctccggtattccaag 634 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 481 cttgaaattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||||||||||| ||||| | ||||||| ||| || ||||||||| Sbjct: 597 cttgaaattctctggggttgaagtgtaatcagccatccctattgtcatc 549
>gb|AF428291.1|AF428291 Arabidopsis thaliana At1g11930/F12F1_20 mRNA, complete cds Length = 1055 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Minus Query: 399 cagacatgcccattgacagctcgcactgctcttccggtattccaag 444 ||||||| ||||| || ||||| || ||||| |||||||||||||| Sbjct: 716 cagacatccccatagatagctcacattgctcctccggtattccaag 671 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 481 cttgaaattctctggagttgaggagtaatcaagcattccaattgtcatc 529 ||||||||||||||| ||||| | ||||||| ||| || ||||||||| Sbjct: 634 cttgaaattctctggggttgaagtgtaatcagccatccctattgtcatc 586
>emb|BX323090.7| Zebrafish DNA sequence from clone CH211-274B7 in linkage group 1, complete sequence Length = 166353 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 148249 gacatttgtgctgcccatttca 148228
>emb|BX649469.8| Zebrafish DNA sequence from clone DKEY-273O8 in linkage group 7, complete sequence Length = 80705 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 355 cctgacatttgtgctgcccatt 376 |||||||||||||||||||||| Sbjct: 41058 cctgacatttgtgctgcccatt 41037
>emb|CR735113.6| Zebrafish DNA sequence from clone CH211-232J17 in linkage group 19, complete sequence Length = 55980 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 10642 gacatttgtgctgcccatttca 10621
>emb|BX005358.16| Zebrafish DNA sequence from clone DKEY-161F12 in linkage group 20, complete sequence Length = 181198 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 140245 gacatttgtgctgcccatttca 140266
>emb|BX284682.7| Zebrafish DNA sequence from clone DKEYP-74C5 in linkage group 22, complete sequence Length = 206289 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 138656 gacatttgtgctgcccatttca 138677
>emb|CT009711.11| Mouse DNA sequence from clone RP23-128L22 on chromosome 13, complete sequence Length = 224715 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 aaatagatacatatttaccacc 255 |||||||||||||||||||||| Sbjct: 50543 aaatagatacatatttaccacc 50564
>emb|CR555296.6| Zebrafish DNA sequence from clone DKEY-88J18 in linkage group 10, complete sequence Length = 198271 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 164964 gacatttgtgctgcccatttca 164943 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 170714 gacatttgtgctgcccattacaat 170737
>emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in linkage group 11, complete sequence Length = 230267 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 212285 gacatttgtgctgcccatttca 212264 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 103129 gacatttgtgctgcccatttca 103108
>emb|BX649405.13| Zebrafish DNA sequence from clone DKEY-190M16 in linkage group 1, complete sequence Length = 231915 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 40103 gacatttgtgctgcccatttca 40124
>emb|AL929516.15| Zebrafish DNA sequence from clone CH211-10C20 in linkage group 1, complete sequence Length = 165892 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 162150 gacatttgtgctgcccatttca 162129
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 480 ccttgaaattctctggagttgaggagtaatcaagcattccaattgtcatc 529 |||||||||||||||| ||||| | ||||||| ||| || ||||||||| Sbjct: 84673 ccttgaaattctctggggttgaagtgtaatcagccatccctattgtcatc 84722 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Plus Query: 399 cagacatgcccattgacagctcgcactgctcttccggtattccaag 444 ||||||| ||||| || ||||| || ||||| |||||||||||||| Sbjct: 84503 cagacatccccatagatagctcacattgctcctccggtattccaag 84548
>gb|AC114581.8| Mus musculus chromosome 8, clone RP23-170M20, complete sequence Length = 197312 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 401 gacatgcccattgacagctcgcactg 426 |||||||||||||||||||| ||||| Sbjct: 135507 gacatgcccattgacagctctcactg 135532
>emb|AL929315.8| Zebrafish DNA sequence from clone CH211-69K21, complete sequence Length = 174143 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttca 379 |||||||||||||||||||||| Sbjct: 164622 gacatttgtgctgcccatttca 164643
>gb|AC163992.9| Mus musculus chromosome 1, clone RP23-193H10, complete sequence Length = 198062 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 tgtaattatcctagttcttttttgggtat 325 ||||| |||||||||||| |||||||||| Sbjct: 196421 tgtaaatatcctagttctgttttgggtat 196449
>gb|AC130674.7| Mus musculus chromosome 1, clone RP24-98E13, complete sequence Length = 167746 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 tgtaattatcctagttcttttttgggtat 325 ||||| |||||||||||| |||||||||| Sbjct: 152138 tgtaaatatcctagttctgttttgggtat 152110
>gb|AC141429.4| Mus musculus BAC clone RP23-56L6 from chromosome 18, complete sequence Length = 192527 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 aaatagatacatatttaccac 254 ||||||||||||||||||||| Sbjct: 1319 aaatagatacatatttaccac 1339
>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 Length = 340000 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tttaggctcccaagaaacatt 76 ||||||||||||||||||||| Sbjct: 308979 tttaggctcccaagaaacatt 308959
>emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 in linkage group 5, complete sequence Length = 182066 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 accaatactgcagctgttaga 273 ||||||||||||||||||||| Sbjct: 74577 accaatactgcagctgttaga 74597
>gb|AF465589.1| Haemoproteus sp. haplotype 41 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 991 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 tattctcttgcaccaaatatg 343 ||||||||||||||||||||| Sbjct: 807 tattctcttgcaccaaatatg 787
>emb|CR394567.7| Zebrafish DNA sequence from clone DKEY-88M1 in linkage group 9, complete sequence Length = 60177 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 ctgacatttgtgctgcccatt 376 ||||||||||||||||||||| Sbjct: 44266 ctgacatttgtgctgcccatt 44286
>emb|BX510649.12| Zebrafish DNA sequence from clone CH211-158M24 in linkage group 5, complete sequence Length = 189844 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 accaatactgcagctgttaga 273 ||||||||||||||||||||| Sbjct: 65740 accaatactgcagctgttaga 65760
>gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-family A, member 1 (Abca1) gene, complete cds Length = 278572 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ggcacatgtgtagaacatcaa 216 ||||||||||||||||||||| Sbjct: 25836 ggcacatgtgtagaacatcaa 25856
>emb|CR855299.12| Zebrafish DNA sequence from clone CH211-199C22 in linkage group 16, complete sequence Length = 116933 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 acatttgtgctgcccatttca 379 ||||||||||||||||||||| Sbjct: 109706 acatttgtgctgcccatttca 109726
>emb|AL954231.3|PTB144O12 Pan troglodytes chromosome 22 BAC PTB-144O12, complete sequence Length = 180638 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tttaggctcccaagaaacatt 76 ||||||||||||||||||||| Sbjct: 39246 tttaggctcccaagaaacatt 39226
>emb|AL954232.2|RP43039B12 Pan troglodytes chromosome 22 BAC RP43-039B12, complete sequence Length = 201761 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tttaggctcccaagaaacatt 76 ||||||||||||||||||||| Sbjct: 47452 tttaggctcccaagaaacatt 47432
>emb|AL954230.2|RP43035C13 Pan troglodytes chromosome 22 BAC RP43-035C13, complete sequence Length = 157305 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tttaggctcccaagaaacatt 76 ||||||||||||||||||||| Sbjct: 81014 tttaggctcccaagaaacatt 80994
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 378 caatcgcctgctcaaaatcggcagacatgcccattgacagc 418 |||| |||| ||||||||| || ||||||||||| |||||| Sbjct: 1747901 caatggccttctcaaaatccgctgacatgcccatcgacagc 1747941
>gb|AF064865.1|AF064865 Homo sapiens chromosome 21q22.3 PAC 58D10, complete sequence Length = 159424 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tttaggctcccaagaaacatt 76 ||||||||||||||||||||| Sbjct: 73612 tttaggctcccaagaaacatt 73592
>gb|AC148013.3| Mus musculus BAC clone RP23-134C2 from 18, complete sequence Length = 192504 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 aaatagatacatatttaccac 254 ||||||||||||||||||||| Sbjct: 5898 aaatagatacatatttaccac 5878
>emb|AL833806.7| Mouse DNA sequence from clone RP23-425H11 on chromosome 4, complete sequence Length = 55805 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ggcacatgtgtagaacatcaa 216 ||||||||||||||||||||| Sbjct: 29832 ggcacatgtgtagaacatcaa 29812
>gb|AC121311.16| Mus musculus chromosome 3, clone RP24-317L5, complete sequence Length = 221261 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ccttgaaattctctggagtt 499 |||||||||||||||||||| Sbjct: 136783 ccttgaaattctctggagtt 136764
>gb|AC123650.7| Mus musculus chromosome 1, clone RP23-124N16, complete sequence Length = 220806 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 atttatttatggcacatgtg 205 |||||||||||||||||||| Sbjct: 112058 atttatttatggcacatgtg 112039
>gb|AC118047.7| Mus musculus chromosome 3, clone RP24-219P20, complete sequence Length = 159930 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gctcccaagaaacattacaa 80 |||||||||||||||||||| Sbjct: 106564 gctcccaagaaacattacaa 106545
>gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosome 5, complete sequence Length = 232201 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 tggttgatccaaccctgaca 361 |||||||||||||||||||| Sbjct: 81499 tggttgatccaaccctgaca 81518
>gb|AC121606.3| Mus musculus BAC clone RP23-314H5 from chromosome 1, complete sequence Length = 200095 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atttatttatggcacatgtg 205 |||||||||||||||||||| Sbjct: 30097 atttatttatggcacatgtg 30116
>emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in linkage group 5, complete sequence Length = 230648 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 158891 tgacatttgtgctgcccatt 158910
>emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 in linkage group 7, complete sequence Length = 208436 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 195751 gacatttgtgctgcccattacaat 195774
>emb|BX927247.20| Zebrafish DNA sequence from clone CH211-189K22 in linkage group 6, complete sequence Length = 160349 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 163 caccatgacaaaacaatatccttatttattta 194 ||||||||||||| |||| |||| |||||||| Sbjct: 116133 caccatgacaaaaaaatagccttttttattta 116102
>emb|CR848816.11| Zebrafish DNA sequence from clone DKEY-99F10 in linkage group 11, complete sequence Length = 158354 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 126924 gacatttgtgctgcccattacaat 126947
>emb|BX927369.10| Zebrafish DNA sequence from clone CH211-134A4 in linkage group 21, complete sequence Length = 184052 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 148950 tgacatttgtgctgcccatt 148931
>emb|CR318662.11| Zebrafish DNA sequence from clone CH211-213L7 in linkage group 10, complete sequence Length = 200648 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 194446 gacatttgtgctgcccattacaat 194469
>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1, complete sequence Length = 208746 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 199411 tgacatttgtgctgcccatt 199430
>emb|CR376849.29| Zebrafish DNA sequence from clone CH211-145A9 in linkage group 11, complete sequence Length = 147098 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 129039 gacatttgtgctgcccattacaat 129016
>emb|CR848676.7| Zebrafish DNA sequence from clone DKEY-265I7 in linkage group 9, complete sequence Length = 96536 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 68007 gacatttgtgctgcccattacaat 67984
>gb|AC003078.1| Homo sapiens BAC clone GS1-117O10 from 7, complete sequence Length = 182433 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgatgaatcaggtagaaaca 109 |||||||||||||||||||| Sbjct: 58387 tgatgaatcaggtagaaaca 58368
>gb|AC142298.1| Pan troglodytes BAC clone RP43-99N14 from 7, complete sequence Length = 162900 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgatgaatcaggtagaaaca 109 |||||||||||||||||||| Sbjct: 43528 tgatgaatcaggtagaaaca 43509
>emb|CR450809.6| Zebrafish DNA sequence from clone CH211-195I6 in linkage group 2, complete sequence Length = 206746 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 48890 tgacatttgtgctgcccatt 48871
>emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chromosome 1 Contains the 3' end of the MGST3 gene for microsomal glutathione S-transferase 3, the ALDH9A1 gene for aldehyde dehydrogenase 9 family (member A1), a ribosomal protein S13 (RPS13) pseudogene, a ribosomal protein L21 (RPL21) pseudogene, two novel genes (FLJ42974), a carbonic anhydrase XIV (CA14) pseudogene, the gene for putative membrane protein (LOC54499), a ribosomal protein L26 (RPL26) pseudogene, the 5' end of (tbc), the 5' end of the UMPK gene for uridine monophosphate kinase and two CpG islands, complete sequence Length = 188217 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 atatccttatttatttatgg 197 |||||||||||||||||||| Sbjct: 139393 atatccttatttatttatgg 139374
>gb|AF465593.1| Haemoproteus sp. haplotype 45 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 591 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tattctcttgcaccaaatat 342 |||||||||||||||||||| Sbjct: 430 tattctcttgcaccaaatat 411
>gb|AF465592.1| Haemoproteus sp. haplotype 44 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 989 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tattctcttgcaccaaatat 342 |||||||||||||||||||| Sbjct: 805 tattctcttgcaccaaatat 786
>gb|AF465590.1| Haemoproteus sp. haplotype 42 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 989 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tattctcttgcaccaaatat 342 |||||||||||||||||||| Sbjct: 805 tattctcttgcaccaaatat 786
>emb|CR450807.11| Zebrafish DNA sequence from clone DKEY-31K5 in linkage group 8, complete sequence Length = 87522 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 80200 gacatttgtgctgcccattacaat 80223
>emb|CR388369.8| Zebrafish DNA sequence from clone CH211-207N23 in linkage group 15, complete sequence Length = 139575 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 7352 gacatttgtgctgcccattacaat 7375
>emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in linkage group 7 Contains the nitr1a_3 gene for novel immune-type receptor 1a, allele 3, the nitr1c_3 gene for novel immune-type receptor 1c, allele 3, the nitr2e_1 gene for novel immune-type receptor 2e, allele 1, the nitr1b_2 gene for novel immune-ype receptor 1b, allele 2, the nitr2a_3 gene for novel immune-type receptor 2a, allele 3, the nitr2b_1 gene for novel immune-type receptor 2b, allele 1, the nitr1f_1 gene for novel immune-type receptor 1f, allele 1, a novel immune-type receptor 2c pseudogene, the nitr3d_3 gene for novel immune-type receptor 3d, allele 3, the nitr1h_1 gene for novel immune-type receptor 1h, allele 1, the nitr1d_5 gene for novel immune-type receptor 1d, allele 5 and two novel immune-type receptor 1 pseudogenes, complete sequence Length = 97640 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 42748 gacatttgtgctgcccattacaat 42771
>emb|AL591497.2| Zebrafish DNA sequence from clone BUSM1-173M20 in linkage group 7 Contains the nitr1.14, nitr1.17, nitr1.18, nitr2.4, nitr2.6, nitr3r.2, nitr1.13, nitr1.15, nitr1.16, nitr2.5, nitr3.4 and nitr3r.1 genes for novel immune-type receptors and a nitr pseudogene, complete sequence Length = 127998 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 68044 gacatttgtgctgcccattacaat 68021
>emb|CR762497.17| Zebrafish DNA sequence from clone DKEY-162B3 in linkage group 13, complete sequence Length = 258636 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 184199 gacatttgtgctgcccattacaat 184176
>emb|BX571852.20| Zebrafish DNA sequence from clone DKEY-175N6 in linkage group 10, complete sequence Length = 178333 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 90929 tgacatttgtgctgcccatt 90910
>emb|AL662785.5| Mouse DNA sequence from clone RP23-186N7 on chromosome 11, complete sequence Length = 158968 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 aaatagatacatatttaccaccaa 257 |||||||| ||||||||||||||| Sbjct: 74580 aaatagatccatatttaccaccaa 74603
>emb|AL807799.5| Zebrafish DNA sequence from clone CH211-257P7 in linkage group 2, complete sequence Length = 175342 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 71681 tgacatttgtgctgcccatt 71662
>emb|BX927097.11| Zebrafish DNA sequence from clone DKEYP-40F4 in linkage group 18, complete sequence Length = 97504 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 89889 tgacatttgtgctgcccatt 89908 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccattt 377 |||||||||||||||||||| Sbjct: 46608 gacatttgtgctgcccattt 46627
>emb|AL627305.12| Zebrafish DNA sequence from clone RP71-1H20 in linkage group 21 Contains a part of a novel gene similar to human ADD1 (alpha adducin 1), a novel gene, three putative novel genes and five CpG islands, complete sequence Length = 150276 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 8359 tgacatttgtgctgcccatt 8340
>emb|BX950857.8| Zebrafish DNA sequence from clone CH211-203D19 in linkage group 5, complete sequence Length = 156682 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 31112 gacatttgtgctgcccattacaat 31135
>emb|BX571949.19| Zebrafish DNA sequence from clone DKEY-25F1 in linkage group 11, complete sequence Length = 149012 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 59410 gacatttgtgctgcccattacaat 59387
>emb|BX649305.9| Zebrafish DNA sequence from clone DKEY-66F12 in linkage group 6, complete sequence Length = 101851 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 52796 gacatttgtgctgcccattacaat 52773
>gb|AC055788.7| Homo sapiens chromosome 8, clone RP11-252H14, complete sequence Length = 145570 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttatttatggcacatgtgt 206 |||||||||||||||||||| Sbjct: 114587 tttatttatggcacatgtgt 114606
>emb|CR376785.10| Zebrafish DNA sequence from clone CH211-266K8 in linkage group 25, complete sequence Length = 173989 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 86135 tgacatttgtgctgcccatt 86116
>emb|BX323872.6| Zebrafish DNA sequence from clone RP71-25E6, complete sequence Length = 184178 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 82749 gacatttgtgctgcccattacaat 82726
>emb|CR385052.5| Zebrafish DNA sequence from clone CH211-166F3 in linkage group 1, complete sequence Length = 163401 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 catttgtgctgcccatttca 379 |||||||||||||||||||| Sbjct: 94505 catttgtgctgcccatttca 94524
>emb|BX296565.8| Zebrafish DNA sequence from clone CH211-269E2 in linkage group 9, complete sequence Length = 61072 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 32902 tgacatttgtgctgcccatt 32883
>emb|AL953886.9| Zebrafish DNA sequence from clone CH211-241A17 in linkage group 6, complete sequence Length = 154152 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccattt 377 |||||||||||||||||||| Sbjct: 62403 gacatttgtgctgcccattt 62422
>gb|AC095353.9| Homo sapiens Xp BAC RP11-615L18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aacatcaaagggtaaatatc 228 |||||||||||||||||||| Sbjct: 75801 aacatcaaagggtaaatatc 75820
>gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, complete sequence Length = 168843 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 gacatgcccattgacagctc 420 |||||||||||||||||||| Sbjct: 73588 gacatgcccattgacagctc 73569
>emb|BX571694.10| Zebrafish DNA sequence from clone CH211-159E21 in linkage group 10, complete sequence Length = 163542 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 79348 tgacatttgtgctgcccatt 79367 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 20907 tgacatttgtgctgcccatt 20888
>gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, complete sequence Length = 141422 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaatagatacatatttacca 253 |||||||||||||||||||| Sbjct: 29399 aaatagatacatatttacca 29380
>emb|BX321896.13| Zebrafish DNA sequence from clone RP71-49B22 in linkage group 23, complete sequence Length = 165985 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 127165 gacatttgtgctgcccattacaat 127142
>gb|AC025471.6| Homo sapiens chromosome 5 clone RP11-138C1, complete sequence Length = 148607 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 gtcaatgccttgaaattctc 492 |||||||||||||||||||| Sbjct: 83988 gtcaatgccttgaaattctc 84007
>gb|AC008968.6| Homo sapiens chromosome 5 clone CTD-2367F19, complete sequence Length = 92998 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 gtcaatgccttgaaattctc 492 |||||||||||||||||||| Sbjct: 73436 gtcaatgccttgaaattctc 73455
>emb|BX649377.8| Zebrafish DNA sequence from clone CH211-196J1 in linkage group 19, complete sequence Length = 217898 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 198944 gacatttgtgctgcccattacaat 198921
>emb|BX323984.7| Zebrafish DNA sequence from clone CH211-157H5 in linkage group 1, complete sequence Length = 177080 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 25490 tgacatttgtgctgcccatt 25471
>emb|BX088566.6| Zebrafish DNA sequence from clone DKEY-63E5 in linkage group 6, complete sequence Length = 195778 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 181934 gacatttgtgctgcccattacaat 181957
>gb|AC009733.5|AC009733 Drosophila melanogaster, chromosome 3R, region 99E-99E, BAC clone BACR05L15, complete sequence Length = 181056 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttcgttacttttaggctccc 66 |||||||||||||||||||| Sbjct: 24478 ttcgttacttttaggctccc 24497
>gb|AY180177.1| Mus musculus KIS kinase (Kis) gene, exons 1 through 8 and complete cds Length = 100207 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 atttatttatggcacatgtg 205 |||||||||||||||||||| Sbjct: 63726 atttatttatggcacatgtg 63707
>emb|AL840636.10| Zebrafish DNA sequence from clone CH211-262K7 in linkage group 20, complete sequence Length = 174999 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 71689 tgacatttgtgctgcccatt 71670
>gb|AC084341.17| Homo sapiens chromosome 8, clone RP11-760J15, complete sequence Length = 141058 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttatttatggcacatgtgt 206 |||||||||||||||||||| Sbjct: 17754 tttatttatggcacatgtgt 17773
>emb|BX004773.11| Zebrafish DNA sequence from clone DKEY-13D19, complete sequence Length = 245924 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 18645 tgacatttgtgctgcccatt 18664
>emb|BX255955.3| Zebrafish DNA sequence from clone CH211-249G22 in linkage group 18, complete sequence Length = 146105 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 132779 tgacatttgtgctgcccatt 132798
>emb|BX004869.13| Zebrafish DNA sequence from clone CH211-69E21 in linkage group 17, complete sequence Length = 182325 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 accctgacatttgtgctgcccatt 376 |||| ||||||||||||||||||| Sbjct: 146062 acccagacatttgtgctgcccatt 146039
>gb|AC004544.1|AC004544 Homo sapiens BAC clone CTB-162B4 from 4, complete sequence Length = 168644 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ttatttatttatggcacatg 203 |||||||||||||||||||| Sbjct: 136706 ttatttatttatggcacatg 136687
>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4, complete sequence Length = 99176 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 14048 gacatttgtgctgcccattacaat 14071
>emb|BX927260.8| Zebrafish DNA sequence from clone DKEY-188P4 in linkage group 22, complete sequence Length = 50202 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 13657 gacatttgtgctgcccattacaat 13634
>emb|BX649441.5| Zebrafish DNA sequence from clone DKEYP-3B1 in linkage group 20, complete sequence Length = 114252 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 105459 gacatttgtgctgcccattacaat 105482
>emb|BX470162.9| Zebrafish DNA sequence from clone CH211-216L23 in linkage group 18, complete sequence Length = 215723 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 213907 tgacatttgtgctgcccatt 213888
>emb|BX465845.7| Zebrafish DNA sequence from clone DKEY-261A10 in linkage group 18, complete sequence Length = 144092 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 110193 tgacatttgtgctgcccatt 110174
>emb|BX511258.6| Zebrafish DNA sequence from clone CH211-81E5 in linkage group 19, complete sequence Length = 200076 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccattt 377 |||||||||||||||||||| Sbjct: 156748 gacatttgtgctgcccattt 156767
>emb|AL844870.6| Zebrafish DNA sequence from clone BUSM1-169I8 in linkage group 7, complete sequence Length = 132503 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 14633 gacatttgtgctgcccattacaat 14610
>emb|BX470074.6| Zebrafish DNA sequence from clone CH211-257C9 in linkage group 18, complete sequence Length = 70420 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccattt 377 |||||||||||||||||||| Sbjct: 47294 gacatttgtgctgcccattt 47275 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 185 tgacatttgtgctgcccatt 166
>emb|AL591389.5| Zebrafish DNA sequence from clone BUSM1-202L16 in linkage group 6, complete sequence Length = 93098 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccattt 377 |||||||||||||||||||| Sbjct: 65700 gacatttgtgctgcccattt 65719
>emb|AL591482.3| Zebrafish DNA sequence from clone BUSM1-116C14 in linkage group 7, complete sequence Length = 95364 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 48326 gacatttgtgctgcccattacaat 48349
>emb|CR753868.6| Zebrafish DNA sequence from clone DKEY-119J14 in linkage group 10, complete sequence Length = 71429 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 9748 tgacatttgtgctgcccatt 9767
>gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 110 of 118 of the complete sequence Length = 228443 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ttcgttacttttaggctccc 66 |||||||||||||||||||| Sbjct: 94019 ttcgttacttttaggctccc 94038
>dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53M8, complete sequence Length = 185588 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 gacatgcccattgacagctc 420 |||||||||||||||||||| Sbjct: 178944 gacatgcccattgacagctc 178925
>emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 in linkage group 5, complete sequence Length = 168421 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 72008 tgacatttgtgctgcccatt 71989
>emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 in linkage group 7, complete sequence Length = 112025 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 46446 gacatttgtgctgcccattacaat 46469
>emb|BX004876.7| Zebrafish DNA sequence from clone DKEY-11M19, complete sequence Length = 174893 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccattt 377 |||||||||||||||||||| Sbjct: 146350 gacatttgtgctgcccattt 146331
>emb|BX001007.6| Zebrafish DNA sequence from clone DKEY-97C13, complete sequence Length = 113198 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 55422 gacatttgtgctgcccattacaat 55399
>emb|AL954649.4| Zebrafish DNA sequence from clone CH211-285P11, complete sequence Length = 170441 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 76979 gacatttgtgctgcccattacaat 76956
>emb|AL844514.12| Zebrafish DNA sequence from clone DKEY-7E20 in linkage group 1, complete sequence Length = 228327 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 199585 tgacatttgtgctgcccatt 199604
>emb|CR388420.19| Zebrafish DNA sequence from clone DKEY-37H18 in linkage group 13, complete sequence Length = 121689 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tgacatttgtgctgcccatt 376 |||||||||||||||||||| Sbjct: 85986 tgacatttgtgctgcccatt 85967
>emb|AL929378.13| Zebrafish DNA sequence from clone CH211-169B18, complete sequence Length = 169874 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 116161 gacatttgtgctgcccattacaat 116138
>emb|CR394569.9| Zebrafish DNA sequence from clone CH211-212K20 in linkage group 10, complete sequence Length = 193776 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gacatttgtgctgcccatttcaat 381 ||||||||||||||||||| |||| Sbjct: 54133 gacatttgtgctgcccattacaat 54110
>dbj|AP005121.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-527H14, complete sequence Length = 155150 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aggatgctactgatgaatca 99 |||||||||||||||||||| Sbjct: 113311 aggatgctactgatgaatca 113330
>gb|AC115017.11| Mus musculus chromosome 3, clone RP24-220A11, complete sequence Length = 167811 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttatttatttatggcacat 202 |||||||||||||||||||| Sbjct: 77595 cttatttatttatggcacat 77614
>emb|AL359312.18| Human DNA sequence from clone RP11-216E19 on chromosome 18, complete sequence Length = 143463 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aggatgctactgatgaatca 99 |||||||||||||||||||| Sbjct: 138147 aggatgctactgatgaatca 138166 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,277,641 Number of Sequences: 3902068 Number of extensions: 6277641 Number of successful extensions: 120062 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119660 Number of HSP's gapped (non-prelim): 399 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)