Clone Name	rbart21c08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predic...	196	5e-47
2	gb|BT016492.1| Zea mays clone Contig325 mRNA sequence	196	5e-47
3	dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clon...	196	5e-47
4	gb|AY109375.1| Zea mays CL457_2 mRNA sequence	196	5e-47
5	dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clon...	188	1e-44
6	emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA	182	7e-43
7	ref|NM_190269.1| Oryza sativa (japonica cultivar-group), predic...	165	2e-37
8	gb|BT016417.1| Zea mays clone Contig250 mRNA sequence	157	4e-35
9	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	157	4e-35
10	dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D...	157	4e-35
11	dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D...	157	4e-35
12	dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescenc...	66	1e-07
13	gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, co...	60	7e-06
14	gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence	54	4e-04
15	gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA	50	0.007
16	emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene	50	0.007
17	ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMA...	48	0.027
18	gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (...	48	0.027
19	gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds	48	0.027
20	gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (...	48	0.027
21	gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At...	48	0.027
22	gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At...	48	0.027
23	gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, com...	48	0.027
24	dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein,...	48	0.027
25	gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, c...	48	0.027
26	emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Co...	48	0.027
27	gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative ...	48	0.027
28	dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	48	0.027
29	gb|AY106024.1| Zea mays PCO063168 mRNA sequence	48	0.027
30	gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete s...	46	0.10
31	emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chr...	44	0.41
32	dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5,...	44	0.41
33	ref|XM_657651.1| Aspergillus nidulans FGSC A4 hypothetical prote...	42	1.6
34	gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence	42	1.6
35	emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chr...	42	1.6
36	emb|AJ005499.1|ASA005499 Avena strigosa pAs14 repetitive DNA seq...	42	1.6
37	gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 ...	42	1.6
38	ref|XM_638845.1| Dictyostelium discoideum hypothetical protein (...	40	6.5
39	gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, comp...	40	6.5
40	gb|BC049636.1| Mus musculus mitchondrial ribosomal protein S7, m...	40	6.5
41	gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome	40	6.5
42	ref|NM_025305.1| Mus musculus mitchondrial ribosomal protein S7 ...	40	6.5
43	ref|XM_545753.2| PREDICTED: Canis familiaris similar to Sodium/p...	40	6.5
44	ref|XM_855596.1| PREDICTED: Canis familiaris similar to Sodium/p...	40	6.5
45	emb|Z81045.1|CEC36F7 Caenorhabditis elegans Cosmid C36F7, comple...	40	6.5
46	gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosom...	40	6.5
47	gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosom...	40	6.5
48	gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, compl...	40	6.5
49	gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume ...	40	6.5
50	gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome	40	6.5
51	gb|AC130456.2| Homo sapiens chromosome 16 clone CTA-363E6, compl...	40	6.5
52	emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050...	40	6.5
53	gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, comp...	40	6.5
54	gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, com...	40	6.5
55	dbj|AK126270.1| Homo sapiens cDNA FLJ44282 fis, clone TRACH2003516	40	6.5
56	dbj|AK162024.1| Mus musculus 12 days embryo female mullerian duc...	40	6.5
57	dbj|AK009251.1| Mus musculus adult male tongue cDNA, RIKEN full-...	40	6.5
58	dbj|AK034688.1| Mus musculus 12 days embryo embryonic body betwe...	40	6.5
59	ref|NM_060132.2| Caenorhabditis elegans IRoquois subclass of hom...	40	6.5
60	ref|NM_178099.2| Danio rerio ATPase, Na+/K+ transporting, alpha ...	40	6.5
61	gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041...	40	6.5
62	gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, ...	40	6.5
63	gb|AY094620.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 9...	40	6.5
64	gb|U91321.1|HUU91321 Human Chromosome 16 BAC clone CIT987SK-A-36...	40	6.5
65	gb|DQ203519.1| Uncultured bacterium clone MedHO1-20-2-C3 predict...	40	6.5
66	gb|AF051242.1|AF051242 Picea mariana probable 60S ribosomal prot...	40	6.5
67	emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on ch...	40	6.5
68	gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, compl...	40	6.5
69	gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, compl...	40	6.5

---

>ref|NM_190270.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 906

 Score =  196 bits (99), Expect = 5e-47
 Identities = 192/223 (86%)
 Strand = Plus / Minus

                                                                       
Query: 251 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 877 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 818

                                                                       
Query: 311 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 370
           | |||||||| ||||||||| | ||||| |||||||| |||   |||   | ||||||||
Sbjct: 817 gttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggttccttcttggttg 758

                                                                       
Query: 371 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 430
           |||| || || |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 757 atttggccatggtaggatcagcacggatggcagcatggaccttcttgtacagtgcttcca 698

                                                      
Query: 431 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
           |||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 697 tgccatcagcatcaattcccttcttgaggtactcactgaagtg 655

---

>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence
          Length = 1365

 Score =  196 bits (99), Expect = 5e-47
 Identities = 162/183 (88%)
 Strand = Plus / Minus

                                                                       
Query: 294 gagactggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtctt 353
           |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||  |||
Sbjct: 902 gagactggccttcctctgctcgtatgtcagtttcttggggttgtacctcttgtgctcctt 843

                                                                       
Query: 354 tggtggttccttggttgattttgctattgtaggatcagcacgaatggcagcatgaacctt 413
           |||||| | ||||||||| ||  | |  | |||||||||||| ||||||||||| |||||
Sbjct: 842 tggtggctgcttggttgacttgaccacagaaggatcagcacggatggcagcatggacctt 783

                                                                       
Query: 414 cttgtacagtgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
           ||||||||| ||||||||| | |||||||| ||||||||||| |||||||||||||||||
Sbjct: 782 cttgtacagagcttccatgtcgtcagcctcaattcccttcttaatgtactcactgaagtg 723

              
Query: 474 aga 476
           |||
Sbjct: 722 aga 720

---

>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full
           insert sequence
          Length = 1219

 Score =  196 bits (99), Expect = 5e-47
 Identities = 192/223 (86%)
 Strand = Plus / Minus

                                                                       
Query: 251 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 973 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 914

                                                                       
Query: 311 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 370
           | |||||||| ||||||||| | ||||| |||||||| |||   |||   | ||||||||
Sbjct: 913 gttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggttccttcttggttg 854

                                                                       
Query: 371 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 430
           |||| || || |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 853 atttggccatggtaggatcagcacggatggcagcatggaccttcttgtacagtgcttcca 794

                                                      
Query: 431 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
           |||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 793 tgccatcagcatcaattcccttcttgaggtactcactgaagtg 751

---

>gb|AY109375.1| Zea mays CL457_2 mRNA sequence
          Length = 1397

 Score =  196 bits (99), Expect = 5e-47
 Identities = 159/179 (88%)
 Strand = Plus / Minus

                                                                       
Query: 298 ctggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggt 357
           ||||||||||||||||| || |||||||||||||| ||||||||||| |||  |||||||
Sbjct: 914 ctggccttcctctgctcatatgtcagcttcttggggttgtacctcttatgctcctttggt 855

                                                                       
Query: 358 ggttccttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttg 417
           || | ||||||||| ||  | || | |||||||||||| ||||||||||| |||||||||
Sbjct: 854 ggctgcttggttgacttgacaatggaaggatcagcacggatggcagcatggaccttcttg 795

                                                                      
Query: 418 tacagtgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtgaga 476
           ||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 794 tacagagcttccatgtcatcagcctcaattcccttcttaatgtactcactgaagtgaga 736

---

>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full
           insert sequence
          Length = 1219

 Score =  188 bits (95), Expect = 1e-44
 Identities = 158/179 (88%)
 Strand = Plus / Minus

                                                                       
Query: 295 agactggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtcttt 354
           ||||||||||||||||| |||||||| ||||||||| | ||||| |||||||| |||   
Sbjct: 930 agactggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgcc 871

                                                                       
Query: 355 ggtggttccttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttc 414
           |||   | |||||||||||| || || |||||||||||||| ||||||||||| ||||||
Sbjct: 870 ggttccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttc 811

                                                                      
Query: 415 ttgtacagtgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
           |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 810 ttgtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 752

---

>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA
          Length = 1114

 Score =  182 bits (92), Expect = 7e-43
 Identities = 192/224 (85%), Gaps = 1/224 (0%)
 Strand = Plus / Minus

                                                                       
Query: 251 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 887 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 828

                                                                       
Query: 311 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 370
           | |||||||| ||||||||| | ||||| |||||||| |||   |||   | ||||||||
Sbjct: 827 gttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggttccttcttggttg 768

                                                                       
Query: 371 attttgctattgtagg-atcagcacgaatggcagcatgaaccttcttgtacagtgcttcc 429
           |||| || || ||||| ||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 767 atttggccatggtagggatcagcacggatggcagcatggaccttcttgtacagtgcttcc 708

                                                       
Query: 430 atgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
           ||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 707 atgccatcagcatcaattcccttcttgaggtactcactgaagtg 664

---

>ref|NM_190269.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 915

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Minus

                                                                       
Query: 251 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
           ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 886 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 827

                                                                       
Query: 311 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 370
           |||||||||||||||||||| | ||||| |||||||| ||    |||   | |||||| |
Sbjct: 826 gctcgtaggtcagcttcttgaggttgtatctcttgtgggtagccggttccttcttggtcg 767

                                                                       
Query: 371 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 430
           |||| || || |||||||| || || ||||||||||| |||||||||||||||| |||||
Sbjct: 766 atttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacagtgattcca 707

                                                      
Query: 431 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
           |||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 706 tgccatcagcgtcaattcccttcttgaggtactcactaaagtg 664

---

>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence
          Length = 1212

 Score =  157 bits (79), Expect = 4e-35
 Identities = 187/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 251 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
           ||||||||||||| || ||||||||    |||||||  || | ||| |||||||||||||
Sbjct: 960 catcagcaccaccggaggagttgagttggttgagcctttcaatgaggctggccttcctct 901

                                                                       
Query: 311 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 370
           |||| || |||||||||||||| ||||||||||| |||  ||||||||| | ||||||||
Sbjct: 900 gctcatatgtcagcttcttggggttgtacctcttatgctcctttggtggctgcttggttg 841

                                                                       
Query: 371 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 430
           | ||  | || | |||||| ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 840 acttaacaatggaaggatcggcacggatggcagcatggaccttcttgtacagcgcttcta 781

                                                      
Query: 431 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
           |  |||||||||| | ||||||||| |||||| ||||||||||
Sbjct: 780 tttcatcagcctcaactcccttcttaatgtacgcactgaagtg 738

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 4e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                            
Query: 363      cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 422
                |||||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 38969192 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 38969133

                                                                   
Query: 423      tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
                |||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 38969132 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 38969082



 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                            
Query: 363      cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 422
                |||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 38963860 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 38963801

                                                                   
Query: 423      tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
                || ||||||||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 38963800 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtg 38963750



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                            
Query: 251      catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
                ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 38964058 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 38963999

                                    
Query: 311      gctcgtaggtcagcttcttg 330
                ||||||||||||||||||||
Sbjct: 38963998 gctcgtaggtcagcttcttg 38963979



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 251      catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
                ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 38969388 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 38969329

                                    
Query: 311      gctcgtaggtcagcttcttg 330
                | |||||||| |||||||||
Sbjct: 38969328 gttcgtaggttagcttcttg 38969309

---

>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score =  157 bits (79), Expect = 4e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                         
Query: 363   cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 422
             |||||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 42825 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 42766

                                                                
Query: 423   tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
             |||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 42765 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 42715



 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                         
Query: 363   cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 422
             |||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 37493 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 37434

                                                                
Query: 423   tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
             || ||||||||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 37433 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtg 37383



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 251   catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
             ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 37691 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 37632

                                 
Query: 311   gctcgtaggtcagcttcttg 330
             ||||||||||||||||||||
Sbjct: 37631 gctcgtaggtcagcttcttg 37612



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 251   catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
             ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 43021 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 42962

                                 
Query: 311   gctcgtaggtcagcttcttg 330
             | |||||||| |||||||||
Sbjct: 42961 gttcgtaggttagcttcttg 42942

---

>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696G06
          Length = 142571

 Score =  157 bits (79), Expect = 4e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                          
Query: 363    cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 422
              |||||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 133978 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 133919

                                                                 
Query: 423    tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
              |||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 133918 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 133868



 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                          
Query: 363    cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 422
              |||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 128646 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 128587

                                                                 
Query: 423    tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 473
              || ||||||||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 128586 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtg 128536



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                          
Query: 251    catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
              ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 128844 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 128785

                                  
Query: 311    gctcgtaggtcagcttcttg 330
              ||||||||||||||||||||
Sbjct: 128784 gctcgtaggtcagcttcttg 128765



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 251    catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 310
              ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 134174 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 134115

                                  
Query: 311    gctcgtaggtcagcttcttg 330
              | |||||||| |||||||||
Sbjct: 134114 gttcgtaggttagcttcttg 134095

---

>dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescence-associated
           protein, complete cds
          Length = 1100

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 391 gcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgattccc 450
           |||||||| |||||||||||||||||||| ||| | || || |||||||| || || || 
Sbjct: 805 gcacgaattgcagcatgaaccttcttgtaaagttcctcaattccatcagcttctatccct 746

                                    
Query: 451 ttcttgatgtactcactgaagtgag 475
           |||||||| || | |||||||||||
Sbjct: 745 ttcttgatatattgactgaagtgag 721

---

>gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, complete cds
          Length = 1171

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 434 catcagcctcgattcccttcttgatgtactcactgaagtgagattg 479
           |||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 721 catcggcctcaatgcccttcttgatgtactcgctgaagtgagattg 676

---

>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence
          Length = 1274

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 391 gcacgaatggcagcatgaaccttcttgtaca 421
           ||||| |||||||||||||||||||||||||
Sbjct: 854 gcacgtatggcagcatgaaccttcttgtaca 824



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 319 gtcagcttcttgggattgtacctcttgtgcgtctt 353
           |||||||||||  ||||||||||||||||| ||||
Sbjct: 926 gtcagcttcttcagattgtacctcttgtgcttctt 892

---

>gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA
          Length = 1114

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 397 atggcagcatgaaccttcttgtaca 421
           |||||||||||||||||||||||||
Sbjct: 771 atggcagcatgaaccttcttgtaca 747

---

>emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene
          Length = 1115

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 391 gcacgaatggcagcatgaaccttcttgta 419
           |||||||| ||||||||||||||||||||
Sbjct: 758 gcacgaattgcagcatgaaccttcttgta 730

---

>ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5);
           structural constituent of ribosome AT3G25520 (ATL5)
           mRNA, complete cds
          Length = 1254

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 808 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 749

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 748 cctttcttgatgtaagcactgaagtgag 721

---

>gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA,
           complete cds
          Length = 969

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659

---

>gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds
          Length = 906

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659

---

>gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA,
           complete cds
          Length = 1161

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 805 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 746

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 745 cctttcttgatgtaagcactgaagtgag 718

---

>gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA,
           complete cds
          Length = 1151

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 803 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 744

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 743 cctttcttgatgtaagcactgaagtgag 716

---

>gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA,
           complete cds
          Length = 925

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659

---

>gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds
          Length = 1108

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 793 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 734

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 733 cctttcttgatgtaagcactgaagtgag 706

---

>dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein, complete cds,
           clone: RAFL22-05-O03
          Length = 517

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 177 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 118

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 117 cctttcttgatgtaagcactgaagtgag 90

---

>gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, complete cds
          Length = 906

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659

---

>emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH10ZG11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1076

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 778 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 719

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 718 cctttcttgatgtaagcactgaagtgag 691

---

>gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative (At3g25520) mRNA,
           complete cds
          Length = 1117

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 803 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 744

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           || |||||||||||  ||||||||||||
Sbjct: 743 cctttcttgatgtaagcactgaagtgag 716

---

>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2
          Length = 84896

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                         
Query: 388   tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 447
             ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 56590 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 56649

                                         
Query: 448   cccttcttgatgtactcactgaagtgag 475
             || |||||||||||  ||||||||||||
Sbjct: 56650 cctttcttgatgtaagcactgaagtgag 56677

---

>gb|AY106024.1| Zea mays PCO063168 mRNA sequence
          Length = 620

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 448 cccttcttgatgtactcactgaagtgag 475
           ||||||||||||||||| ||||||||||
Sbjct: 587 cccttcttgatgtactcgctgaagtgag 560

---

>gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete sequence
          Length = 1248

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                       
Query: 389 cagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgattc 448
           |||||||||| || || ||||||||||||||||   | || ||||  ||||| || | ||
Sbjct: 807 cagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaactc 748

                                      
Query: 449 ccttcttgatgtactcactgaagtgag 475
           | |||||||||||  ||||||||||||
Sbjct: 747 ctttcttgatgtaagcactgaagtgag 721

---

>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete
              sequence
          Length = 219800

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 71     cagaacggtactcaaaaccaagggggcagg 100
              ||||| || |||||||||||||||||||||
Sbjct: 138517 cagaatgggactcaaaaccaagggggcagg 138546

---

>dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5, partial cds
          Length = 399

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 316 taggtcagcttcttgggattgtacctcttgtgcgtctt 353
           ||||||||||||||  | |||||||||||||| |||||
Sbjct: 276 taggtcagcttcttaaggttgtacctcttgtgtgtctt 239



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 397 atggcagcatgaaccttcttgtaca 421
           |||||||| ||||||||||||||||
Sbjct: 195 atggcagcgtgaaccttcttgtaca 171

---

>ref|XM_657651.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5139.2), mRNA
          Length = 3624

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 224  actctcattcatcgtcgtcttcatc 248
            ||||||||||||| |||||||||||
Sbjct: 3164 actctcattcatcttcgtcttcatc 3188

---

>gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 397 atggcagcatgaaccttcttgtaca 421
           ||||||||||||||||| |||||||
Sbjct: 794 atggcagcatgaacctttttgtaca 770

---

>emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chromosome 4 Contains the
             5' end of the Dbccr1 gene for deleted in bladder cancer 1,
             complete sequence
          Length = 186197

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 53    taagataatccagaactccag 73
             |||||||||||||||||||||
Sbjct: 81236 taagataatccagaactccag 81216

---

>emb|AJ005499.1|ASA005499 Avena strigosa pAs14 repetitive DNA sequence
          Length = 639

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 353 ttggtggttccttggttgattttgc 377
           ||||||||||||||| |||||||||
Sbjct: 341 ttggtggttccttgggtgattttgc 317

---

>gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 haplotype) gene, 3' end
          Length = 2006

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 446 ttcccttcttgatgtactcac 466
           |||||||||||||||||||||
Sbjct: 906 ttcccttcttgatgtactcac 926

---

>ref|XM_638845.1| Dictyostelium discoideum hypothetical protein (DDB0217483), partial
            mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 232  tcatcgtcgtcttcatcgacatca 255
            ||||| ||||||||||||||||||
Sbjct: 1936 tcatcatcgtcttcatcgacatca 1959

---

>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   gagactggccttcctctgct 313
             ||||||||||||||||||||
Sbjct: 17640 gagactggccttcctctgct 17621

---

>gb|BC049636.1| Mus musculus mitchondrial ribosomal protein S7, mRNA (cDNA clone
            MGC:58388 IMAGE:6532964), complete cds
          Length = 1355

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 122  aacttgagcaaaaatgcctctcac 145
            ||||||||||||| ||||||||||
Sbjct: 1121 aacttgagcaaaactgcctctcac 1144

---

>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      aacaaaccctgaagcaatgt 27
              ||||||||||||||||||||
Sbjct: 958761 aacaaaccctgaagcaatgt 958742

---

>ref|NM_025305.1| Mus musculus mitchondrial ribosomal protein S7 (Mrps7), mRNA
          Length = 1355

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 122  aacttgagcaaaaatgcctctcac 145
            ||||||||||||| ||||||||||
Sbjct: 1121 aacttgagcaaaactgcctctcac 1144

---

>ref|XM_545753.2| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting
            ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+
            ATPase 2), transcript variant 1 (LOC488636), mRNA
          Length = 3039

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  ccttcctctgctcgtaggtc 321
            ||||||||||||||||||||
Sbjct: 2815 ccttcctctgctcgtaggtc 2796

---

>ref|XM_855596.1| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting
            ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+
            ATPase 2), transcript variant 2 (LOC488636), mRNA
          Length = 2949

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  ccttcctctgctcgtaggtc 321
            ||||||||||||||||||||
Sbjct: 2833 ccttcctctgctcgtaggtc 2814

---

>emb|Z81045.1|CEC36F7 Caenorhabditis elegans Cosmid C36F7, complete sequence
          Length = 39211

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 232  tcatcgtcgtcttcatcgacatca 255
            |||||||||||||||||| |||||
Sbjct: 1300 tcatcgtcgtcttcatcgtcatca 1323

---

>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence
          Length = 161757

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    tggttccttggttgattttg 376
              ||||||||||||||||||||
Sbjct: 134118 tggttccttggttgattttg 134137

---

>gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosome 10, complete
             sequence
          Length = 174497

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    aaaccctgaagcaatgtcaa 30
             ||||||||||||||||||||
Sbjct: 30387 aaaccctgaagcaatgtcaa 30368

---

>gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, complete sequence
          Length = 177899

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    aaaccctgaagcaatgtcaaaatg 34
             |||||| |||||||||||||||||
Sbjct: 57136 aaacccagaagcaatgtcaaaatg 57159

---

>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1)
             gene, complete cds
          Length = 169976

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   gttccttggttgattttgct 378
             ||||||||||||||||||||
Sbjct: 35316 gttccttggttgattttgct 35297

---

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 279     attgagccgctctacgagac 298
               ||||||||||||||||||||
Sbjct: 4242294 attgagccgctctacgagac 4242313

---

>gb|AC130456.2| Homo sapiens chromosome 16 clone CTA-363E6, complete sequence
          Length = 220579

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    aagcatgaagacagcactat 205
              ||||||||||||||||||||
Sbjct: 133716 aagcatgaagacagcactat 133697

---

>emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050K3 on chromosome 20 Contains part
             of the EYA2 gene for eyes absent homolog 2 (Drosophila), a
             glyceraldehyde 3-phosphate dehydrogenase (GAPDH)
             pseudogene and an RPL27A (ribosomal protein L27A)
             pseudogene, complete sequence
          Length = 143981

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    tttaagataatccagaactccaga 74
             |||||||||| |||||||||||||
Sbjct: 56872 tttaagataaaccagaactccaga 56849

---

>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence
          Length = 230597

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   gagactggccttcctctgct 313
             ||||||||||||||||||||
Sbjct: 56125 gagactggccttcctctgct 56144

---

>gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, complete sequence
          Length = 203937

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   tggttccttggttgattttg 376
             ||||||||||||||||||||
Sbjct: 33502 tggttccttggttgattttg 33521

---

>dbj|AK126270.1| Homo sapiens cDNA FLJ44282 fis, clone TRACH2003516
          Length = 2555

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  aagcatgaagacagcactat 205
            ||||||||||||||||||||
Sbjct: 1586 aagcatgaagacagcactat 1567

---

>dbj|AK162024.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820413L12 product:mitchondrial ribosomal
            protein S7, full insert sequence
          Length = 1715

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 122  aacttgagcaaaaatgcctctcac 145
            ||||||||||||| ||||||||||
Sbjct: 1100 aacttgagcaaaactgcctctcac 1123

---

>dbj|AK009251.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310009G03 product:mitchondrial ribosomal
            protein S7, full insert sequence
          Length = 1288

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 122  aacttgagcaaaaatgcctctcac 145
            ||||||||||||| ||||||||||
Sbjct: 1086 aacttgagcaaaactgcctctcac 1109

---

>dbj|AK034688.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430024N04 product:unclassifiable, full insert
            sequence
          Length = 2042

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 357  tggttccttggttgattttg 376
            ||||||||||||||||||||
Sbjct: 1763 tggttccttggttgattttg 1744

---

>ref|NM_060132.2| Caenorhabditis elegans IRoquois subclass of homeoboX family member
           (irx-1) (irx-1) mRNA, complete cds
          Length = 1150

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 232 tcatcgtcgtcttcatcgacatca 255
           |||||||||||||||||| |||||
Sbjct: 675 tcatcgtcgtcttcatcgtcatca 652

---

>ref|NM_178099.2| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.5 polypeptide
            (atp1a1a.5), mRNA
          Length = 3838

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  ccttcctctgctcgtaggtc 321
            ||||||||||||||||||||
Sbjct: 2810 ccttcctctgctcgtaggtc 2791

---

>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
              complete sequence
          Length = 333321

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    tcatcgtcgtcttcatcgacatca 255
              ||||| ||||||||||||||||||
Sbjct: 171756 tcatcatcgtcttcatcgacatca 171779

---

>gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, complete sequence
          Length = 93590

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   cgtcgtcttcatcgacatca 255
             ||||||||||||||||||||
Sbjct: 76007 cgtcgtcttcatcgacatca 76026

---

>gb|AY094620.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 9 (atp1a1a.5) mRNA,
            complete cds
          Length = 3838

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  ccttcctctgctcgtaggtc 321
            ||||||||||||||||||||
Sbjct: 2810 ccttcctctgctcgtaggtc 2791

---

>gb|U91321.1|HUU91321 Human Chromosome 16 BAC clone CIT987SK-A-363E6, complete sequence
          Length = 220633

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    aagcatgaagacagcactat 205
              ||||||||||||||||||||
Sbjct: 133766 aagcatgaagacagcactat 133747

---

>gb|DQ203519.1| Uncultured bacterium clone MedHO1-20-2-C3 predicted
          proteorhodopsin gene, partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 51 tttaagataatccagaactc 70
          ||||||||||||||||||||
Sbjct: 62 tttaagataatccagaactc 43

---

>gb|AF051242.1|AF051242 Picea mariana probable 60S ribosomal protein L5 (Sb58) mRNA,
           partial cds
          Length = 556

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 394 cgaatggcagcatgaaccttcttgtaca 421
           |||||||||||||| || ||||||||||
Sbjct: 118 cgaatggcagcatgcactttcttgtaca 91

---

>emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on chromosome 11, complete
             sequence
          Length = 198031

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 122   aacttgagcaaaaatgcctctcac 145
             ||||||||||||| ||||||||||
Sbjct: 17403 aacttgagcaaaactgcctctcac 17380

---

>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence
          Length = 207157

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aaaccctgaagcaatgtcaa 30
             ||||||||||||||||||||
Sbjct: 73655 aaaccctgaagcaatgtcaa 73674

---

>gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, complete sequence
          Length = 210784

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     aaaccctgaagcaatgtcaaaatg 34
              |||||| |||||||||||||||||
Sbjct: 190292 aaacccagaagcaatgtcaaaatg 190315


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,151,297
Number of Sequences: 3902068
Number of extensions: 4151297
Number of successful extensions: 77977
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77766
Number of HSP's gapped (non-prelim): 185
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---