ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart21c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009126.1| Triticum aestivum clone wl1n.pk0019.b5:fis, full ... 319 4e-84
2gb|AY103666.1| Zea mays PCO119463 mRNA sequence 139 9e-30
3gb|AY530961.1| Zea mays dTDP-glucose 4,6-dehydratase mRNA, compl... 137 4e-29
4ref|NM_189435.1| Oryza sativa (japonica cultivar-group), predic... 119 8e-24
5dbj|AK070623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 8e-24
6gb|BT016798.1| Zea mays clone Contig631 mRNA sequence 88 3e-14
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
8dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
9gb|BT013113.1| Lycopersicon esculentum clone 114400R, mRNA sequence 50 0.006
10emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 46 0.10
11ref|NM_128345.2| Arabidopsis thaliana AXS1 (UDP-D-APIOSE/UDP-D-X... 44 0.40
12gb|AY735589.1| Arabidopsis thaliana hypothetical protein AT2G278... 44 0.40
13gb|AY442191.1| Arabidopsis thaliana UDP-D-apiose/UDP-D-xylose sy... 44 0.40
14gb|BT001016.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, com... 44 0.40
15gb|AC144731.15| Medicago truncatula clone mth2-5g18, complete se... 44 0.40
16gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 ma... 44 0.40
17gb|AF361574.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, com... 44 0.40
18gb|AY086830.1| Arabidopsis thaliana clone 28205 mRNA, complete s... 44 0.40
19gb|AY924751.1| Arabidopsis thaliana hypothetical protein (At2g27... 44 0.40
20ref|NM_129791.2| Arabidopsis thaliana ATP binding / kinase/ prot... 42 1.6
21gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, com... 42 1.6
22gb|AC116525.24| Mus musculus chromosome 15, clone RP24-352I18, c... 42 1.6
23ref|XM_751274.1| Ustilago maydis 521 hypothetical protein (UM002... 42 1.6
24gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map... 42 1.6
25gb|AC010250.7| Homo sapiens chromosome 5 clone CTC-425H14, compl... 42 1.6
26gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, comple... 42 1.6
27emb|BX820539.1|CNS0A9L9 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
28emb|BX820275.1|CNS0A9OX Arabidopsis thaliana Full-length cDNA Co... 42 1.6
29gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosom... 42 1.6
30gb|AC025463.5|AC025463 Homo sapiens chromosome 5 clone CTD-2252L... 42 1.6
31gb|DQ345778.1| Solanum tuberosum UDP-apiose/xylose synthase (UAX... 42 1.6
32dbj|BS000099.1| Pan troglodytes chromosome 22 clone:PTB-047E13, ... 42 1.6
33gb|AC154852.2| Mus musculus BAC clone RP23-33B19 from 16, comple... 42 1.6
34gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.2
35gb|M81719.1|WHTGBL1A Triticum aestivu storage protein (Gbl1) gen... 40 6.2
36ref|XM_322306.1| Neurospora crassa OR74A predicted protein (NCU0... 40 6.2
37ref|XM_951513.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
38gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incom... 40 6.2
39gb|AC125014.8| Mus musculus chromosome 16, clone RP24-149C21, co... 40 6.2
40gb|AY317283.1| Mus musculus olfactory receptor Olfr198 (Olfr198)... 40 6.2
41gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, comp... 40 6.2
42ref|XM_382305.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 6.2
43ref|XM_567736.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 6.2
44ref|XM_805570.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.2
45ref|XM_808875.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.2
46gb|AY074074.1| Mus musculus olfactory receptor MOR182-8 pseudoge... 40 6.2
47gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, com... 40 6.2
48gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 6.2
49gb|AC109219.13| Mus musculus chromosome 1, clone RP23-429I18, co... 40 6.2
50ref|NM_001011808.1| Mus musculus olfactory receptor 198 (Olfr198... 40 6.2
51gb|AC110232.15| Mus musculus chromosome 1, clone RP23-67H24, com... 40 6.2
52gb|M64372.1|BLYBEG1 Barley embryo globulin (BEG1) mRNA, complete... 40 6.2 
>gb|BT009126.1| Triticum aestivum clone wl1n.pk0019.b5:fis, full insert mRNA
           sequence
          Length = 692

 Score =  319 bits (161), Expect = 4e-84
 Identities = 182/189 (96%)
 Strand = Plus / Minus

                                                                       
Query: 271 gccgtcgtcgtctagcttgacggcgtcgccgtggccagacacatctgcgtcttgacagct 330
           |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 475 gccgtcatcgtctagcttgaaggcgtcgccgtggccagacacatctgcgtcttcacagcc 416

                                                                       
Query: 331 tccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgagaggggtc 390
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 415 tccttgtaggtcttgtgctggtaggtcagcgtcgtctccagcaggtccttgagaggggtc 356

                                                                       
Query: 391 ttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtcactg 450
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 355 ttggggttccaccctagctgcttgttgatcagggtcatgtcagggatcctcttgtcgctg 296

                    
Query: 451 tcgtcgtac 459
           |||||||||
Sbjct: 295 tcgtcgtac 287



 Score =  155 bits (78), Expect = 2e-34
 Identities = 162/187 (86%), Gaps = 11/187 (5%)
 Strand = Plus / Minus

                                                                       
Query: 65  taacaaacactgccaccacaggtatgatagatactcagatactcggtcccttttgcccga 124
           ||||||||||||||||||||||||| |||||||||||| |        || ||||||| |
Sbjct: 665 taacaaacactgccaccacaggtataatagatactcagtt--------ccctttgcccaa 614

                                                                       
Query: 125 tatagggttacacaacgacgaatctaggtaagataaga-gatgggtgg-tgggatctaga 182
           ||||||||||||||| |||||||||||||| | ||||| ||||||||| || ||||||||
Sbjct: 613 tatagggttacacaatgacgaatctaggtagg-taagaagatgggtgggtgtgatctaga 555

                                                                       
Query: 183 ggcgcgacaaaaacgacgacggtggtttcactatgacatccgtatccggcttccaaaaga 242
           |||||||||||||||||||||  |||||||||| || ||  ||||| |||||||||||||
Sbjct: 554 ggcgcgacaaaaacgacgacgacggtttcactacgatataagtatctggcttccaaaaga 495

                  
Query: 243 tcaagag 249
           |||||||
Sbjct: 494 tcaagag 488
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>gb|AY103666.1| Zea mays PCO119463 mRNA sequence
          Length = 1518

 Score =  139 bits (70), Expect = 9e-30
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                        
Query: 325  acagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgaga 384
            |||||||| ||||| ||||||||||| || ||||| || ||||||||||| |||||||||
Sbjct: 1054 acagcttctttgtatgtcttgtgctgatacgtcagcgttgtctccagcagatccttgaga 995

                                                                        
Query: 385  ggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttg 444
            || ||||| |||||||| ||||||||||||||||| |  |||||||||||||||||||||
Sbjct: 994  ggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttg 935

              
Query: 445  tc 446
            ||
Sbjct: 934  tc 933
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>gb|AY530961.1| Zea mays dTDP-glucose 4,6-dehydratase mRNA, complete cds
          Length = 1505

 Score =  137 bits (69), Expect = 4e-29
 Identities = 108/121 (89%)
 Strand = Plus / Minus

                                                                        
Query: 326  cagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgagag 385
            ||||||| ||||| ||||||||||| || ||||| || ||||||||||| ||||||||||
Sbjct: 1278 cagcttctttgtatgtcttgtgctgatacgtcagcgttgtctccagcagatccttgagag 1219

                                                                        
Query: 386  gggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgt 445
            | ||||| |||||||| ||||||||||||||||| |  ||||||||||||||||||||||
Sbjct: 1218 gcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgt 1159

             
Query: 446  c 446
            |
Sbjct: 1158 c 1158
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>ref|NM_189435.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1197

 Score =  119 bits (60), Expect = 8e-24
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                        
Query: 322  ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 381
            |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 1163 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 1104

                                                                        
Query: 382  agaggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctc 441
            ||||||||||| || ||||| || |||||||||||||| | ||||||||| || ||||||
Sbjct: 1103 agaggggtcttcggattccaaccaagctgcttgttgattatggtcatgtcaggaatcctc 1044

                    
Query: 442  ttgtcact 449
            || |||||
Sbjct: 1043 ttatcact 1036
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>dbj|AK070623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063F13, full
            insert sequence
          Length = 1823

 Score =  119 bits (60), Expect = 8e-24
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                        
Query: 322  ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 381
            |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 1331 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 1272

                                                                        
Query: 382  agaggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctc 441
            ||||||||||| || ||||| || |||||||||||||| | ||||||||| || ||||||
Sbjct: 1271 agaggggtcttcggattccaaccaagctgcttgttgattatggtcatgtcaggaatcctc 1212

                    
Query: 442  ttgtcact 449
            || |||||
Sbjct: 1211 ttatcact 1204
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>gb|BT016798.1| Zea mays clone Contig631 mRNA sequence
          Length = 1534

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 101/120 (84%)
 Strand = Plus / Minus

                                                                        
Query: 325  acagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgaga 384
            |||||||| ||| | | |||| |||| || ||||| || ||||||||||| |||||||||
Sbjct: 1160 acagcttctttggatggcttgggctgatacgtcagcgttgtctccagcagatccttgaga 1101

                                                                        
Query: 385  ggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttg 444
            |||||||| ||| |||| |||||||| ||| |||| |  |||||| ||||||||||||||
Sbjct: 1100 ggggtctttggggtccaacctagctggttggtgattatagtcatggcggggatcctcttg 1041
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                            
Query: 322      ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 381
                |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 42731615 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 42731674

                                          
Query: 382      agaggggtcttggggttccaccctag 407
                ||||||||||| || ||||| |||||
Sbjct: 42731675 agaggggtcttcggattccaacctag 42731700



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 406      agctgcttgttgatcagggtcatgtcggggatcctcttgtcact 449
                |||||||||||||| | ||||||||| || |||||||| |||||
Sbjct: 42731793 agctgcttgttgattatggtcatgtcaggaatcctcttatcact 42731836
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>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1656_A11
          Length = 148887

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                         
Query: 322   ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 381
             |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 64380 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 64439

                                       
Query: 382   agaggggtcttggggttccaccctag 407
             ||||||||||| || ||||| |||||
Sbjct: 64440 agaggggtcttcggattccaacctag 64465



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 406   agctgcttgttgatcagggtcatgtcggggatcctcttgtcact 449
             |||||||||||||| | ||||||||| || |||||||| |||||
Sbjct: 64558 agctgcttgttgattatggtcatgtcaggaatcctcttatcact 64601
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>gb|BT013113.1| Lycopersicon esculentum clone 114400R, mRNA sequence
          Length = 1541

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 388  gtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtca 447
            ||||| |||||||| || |||||  ||||||| | ||||||||| || |||| |||||||
Sbjct: 1124 gtctttgggttccaaccgagctgtctgttgattatggtcatgtctggaatccgcttgtca 1065

                 
Query: 448  ctgtc 452
            |||||
Sbjct: 1064 ctgtc 1060
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 12     ctctctcttactaacagcaaaag 34
              |||||||||||||||||||||||
Sbjct: 613235 ctctctcttactaacagcaaaag 613257
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>ref|NM_128345.2| Arabidopsis thaliana AXS1 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 1)
            AT2G27860 (AXS1) mRNA, complete cds
          Length = 1516

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 423  ggtcatgtcggggatcctcttgtcactgtc 452
            ||||||||| ||||| ||||||||||||||
Sbjct: 1093 ggtcatgtctgggattctcttgtcactgtc 1064
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>gb|AY735589.1| Arabidopsis thaliana hypothetical protein AT2G27860 mRNA, complete
            cds
          Length = 1514

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 423  ggtcatgtcggggatcctcttgtcactgtc 452
            ||||||||| ||||| ||||||||||||||
Sbjct: 1102 ggtcatgtctgggattctcttgtcactgtc 1073
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>gb|AY442191.1| Arabidopsis thaliana UDP-D-apiose/UDP-D-xylose synthase (AXS1) mRNA,
            complete cds
          Length = 1170

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 423  ggtcatgtcggggatcctcttgtcactgtc 452
            ||||||||| ||||| ||||||||||||||
Sbjct: 1038 ggtcatgtctgggattctcttgtcactgtc 1009
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>gb|BT001016.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds
          Length = 1170

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 423  ggtcatgtcggggatcctcttgtcactgtc 452
            ||||||||| ||||| ||||||||||||||
Sbjct: 1038 ggtcatgtctgggattctcttgtcactgtc 1009
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>gb|AC144731.15| Medicago truncatula clone mth2-5g18, complete sequence
          Length = 115175

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 388   gtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtca 447
             ||||| || ||||| || |||||||||||||| | |||||| || || || |||||||||
Sbjct: 13412 gtcttcggattccatccaagctgcttgttgatgatggtcatatcaggaattctcttgtca 13353

               
Query: 448   ct 449
             ||
Sbjct: 13352 ct 13351
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>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
             sequence
          Length = 118196

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 423   ggtcatgtcggggatcctcttgtcactgtc 452
             ||||||||| ||||| ||||||||||||||
Sbjct: 14770 ggtcatgtctgggattctcttgtcactgtc 14741
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>gb|AF361574.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds
          Length = 1386

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 423  ggtcatgtcggggatcctcttgtcactgtc 452
            ||||||||| ||||| ||||||||||||||
Sbjct: 1090 ggtcatgtctgggattctcttgtcactgtc 1061
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>gb|AY086830.1| Arabidopsis thaliana clone 28205 mRNA, complete sequence
          Length = 1496

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 423  ggtcatgtcggggatcctcttgtcactgtc 452
            ||||||||| ||||| ||||||||||||||
Sbjct: 1096 ggtcatgtctgggattctcttgtcactgtc 1067
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>gb|AY924751.1| Arabidopsis thaliana hypothetical protein (At2g27860) mRNA, complete
            cds
          Length = 1170

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 423  ggtcatgtcggggatcctcttgtcactgtc 452
            ||||||||| ||||| ||||||||||||||
Sbjct: 1038 ggtcatgtctgggattctcttgtcactgtc 1009
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>ref|NM_129791.2| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine
            kinase AT2G42290 mRNA, complete cds
          Length = 2213

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 188  gacaaaaacgacgacggtggtttca 212
            |||||| ||||||||||||||||||
Sbjct: 1051 gacaaagacgacgacggtggtttca 1075
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>gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, complete sequence
          Length = 182465

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 156  gataagagatgggtggtggga 176
            |||||||||||||||||||||
Sbjct: 4675 gataagagatgggtggtggga 4695
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>gb|AC116525.24| Mus musculus chromosome 15, clone RP24-352I18, complete sequence
          Length = 149726

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   gataagagatgggtggtggga 176
             |||||||||||||||||||||
Sbjct: 35520 gataagagatgggtggtggga 35500
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>ref|XM_751274.1| Ustilago maydis 521 hypothetical protein (UM00220.1) partial mRNA
          Length = 531

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 432 ggggatcctcttgtcactgtc 452
           |||||||||||||||||||||
Sbjct: 278 ggggatcctcttgtcactgtc 258
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>gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map EG05C12, complete
            sequence
          Length = 85835

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 188  gacaaaaacgacgacggtggtttca 212
            |||||| ||||||||||||||||||
Sbjct: 1799 gacaaagacgacgacggtggtttca 1775
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>gb|AC010250.7| Homo sapiens chromosome 5 clone CTC-425H14, complete sequence
          Length = 157061

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   gtctccagcaggtccttgaga 384
             |||||||||||||||||||||
Sbjct: 52428 gtctccagcaggtccttgaga 52448
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>gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, complete sequence
          Length = 159922

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 364    gtctccagcaggtccttgaga 384
              |||||||||||||||||||||
Sbjct: 148418 gtctccagcaggtccttgaga 148438
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>emb|BX820539.1|CNS0A9L9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH45ZG12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1580

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 188 gacaaaaacgacgacggtggtttca 212
           |||||| ||||||||||||||||||
Sbjct: 418 gacaaagacgacgacggtggtttca 442
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>emb|BX820275.1|CNS0A9OX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH16ZF04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1588

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 188 gacaaaaacgacgacggtggtttca 212
           |||||| ||||||||||||||||||
Sbjct: 468 gacaaagacgacgacggtggtttca 492
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>gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosome 15, complete
             sequence
          Length = 211214

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   gataagagatgggtggtggga 176
             |||||||||||||||||||||
Sbjct: 11608 gataagagatgggtggtggga 11588
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>gb|AC025463.5|AC025463 Homo sapiens chromosome 5 clone CTD-2252L7, complete sequence
          Length = 98070

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   gtctccagcaggtccttgaga 384
             |||||||||||||||||||||
Sbjct: 65684 gtctccagcaggtccttgaga 65704
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>gb|DQ345778.1| Solanum tuberosum UDP-apiose/xylose synthase (UAXs) mRNA, complete
            cds
          Length = 1375

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 388  gtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtca 447
            ||||| |||||||| || |||||  ||||||| | ||||||||| || || | |||||||
Sbjct: 1105 gtctttgggttccaaccaagctgtctgttgattatggtcatgtctggaattcgcttgtca 1046

                 
Query: 448  ctgtc 452
            |||||
Sbjct: 1045 ctgtc 1041
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>dbj|BS000099.1| Pan troglodytes chromosome 22 clone:PTB-047E13, map 22, complete
              sequences
          Length = 231583

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 334    ttgtaggtcttgtgctggtaggtca 358
              |||||||| ||||||||||||||||
Sbjct: 154461 ttgtaggttttgtgctggtaggtca 154437
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>gb|AC154852.2| Mus musculus BAC clone RP23-33B19 from 16, complete sequence
          Length = 184760

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 233    ttccaaaagatcaagagggcc 253
              |||||||||||||||||||||
Sbjct: 142718 ttccaaaagatcaagagggcc 142738
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    gtcgtctccagcaggtcctt 380
              ||||||||||||||||||||
Sbjct: 379067 gtcgtctccagcaggtcctt 379086
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>gb|M81719.1|WHTGBL1A Triticum aestivu storage protein (Gbl1) gene, complete cds
          Length = 4747

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  aagagggccgtggccgaggc 264
            ||||||||||||||||||||
Sbjct: 1909 aagagggccgtggccgaggc 1928
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>ref|XM_322306.1| Neurospora crassa OR74A predicted protein (NCU00221.1) partial mRNA
          Length = 2328

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 190  caaaaacgacgacggtggtt 209
            ||||||||||||||||||||
Sbjct: 1767 caaaaacgacgacggtggtt 1748
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>ref|XM_951513.1| Neurospora crassa OR74A hypothetical protein (NCU00221.1) partial
            mRNA
          Length = 2328

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 190  caaaaacgacgacggtggtt 209
            ||||||||||||||||||||
Sbjct: 1767 caaaaacgacgacggtggtt 1748
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>gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
             SR4
          Length = 87724

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 413   tgttgatcagggtcatgtcggggatcctcttgtcactgtc 452
             ||||||| | ||||||||| || || ||||||||||||||
Sbjct: 14313 tgttgattatggtcatgtctggaattctcttgtcactgtc 14274
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>gb|AC125014.8| Mus musculus chromosome 16, clone RP24-149C21, complete sequence
          Length = 177471

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    aacaaacactgccaccacag 85
             ||||||||||||||||||||
Sbjct: 45759 aacaaacactgccaccacag 45778
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>gb|AY317283.1| Mus musculus olfactory receptor Olfr198 (Olfr198) gene, complete
          cds
          Length = 921

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 66 aacaaacactgccaccacag 85
          ||||||||||||||||||||
Sbjct: 39 aacaaacactgccaccacag 20
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>gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, complete sequence
          Length = 241184

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     aacaaacactgccaccacag 85
              ||||||||||||||||||||
Sbjct: 213585 aacaaacactgccaccacag 213604
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>ref|XM_382305.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02129.1)
            partial mRNA
          Length = 5295

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 411  cttgttgatcagggtcatgt 430
            ||||||||||||||||||||
Sbjct: 4032 cttgttgatcagggtcatgt 4013
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>ref|XM_567736.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNK01260) partial mRNA
          Length = 2108

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 361 gtcgtctccagcaggtcctt 380
           ||||||||||||||||||||
Sbjct: 231 gtcgtctccagcaggtcctt 212
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>ref|XM_805570.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508567.100) partial mRNA
          Length = 4218

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   aacaaacactgccaccacag 85
            ||||||||||||||||||||
Sbjct: 2987 aacaaacactgccaccacag 3006
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>ref|XM_808875.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507649.100) partial mRNA
          Length = 4218

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   aacaaacactgccaccacag 85
            ||||||||||||||||||||
Sbjct: 2987 aacaaacactgccaccacag 3006
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>gb|AY074074.1| Mus musculus olfactory receptor MOR182-8 pseudogene, partial
          sequence
          Length = 919

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 66 aacaaacactgccaccacag 85
          ||||||||||||||||||||
Sbjct: 39 aacaaacactgccaccacag 20
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>gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, complete sequence
          Length = 163976

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 410    gcttgttgatcagggtcatg 429
              ||||||||||||||||||||
Sbjct: 108105 gcttgttgatcagggtcatg 108124
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 251     gccgtggccgaggcagacgtgccg 274
               ||||||||||| ||||||||||||
Sbjct: 3987345 gccgtggccgatgcagacgtgccg 3987322
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>gb|AC109219.13| Mus musculus chromosome 1, clone RP23-429I18, complete sequence
          Length = 204942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    tgtaggtcttgtgctggtag 354
              ||||||||||||||||||||
Sbjct: 107798 tgtaggtcttgtgctggtag 107817
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>ref|NM_001011808.1| Mus musculus olfactory receptor 198 (Olfr198), mRNA
          Length = 921

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 66 aacaaacactgccaccacag 85
          ||||||||||||||||||||
Sbjct: 39 aacaaacactgccaccacag 20
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>gb|AC110232.15| Mus musculus chromosome 1, clone RP23-67H24, complete sequence
          Length = 209668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    tgtaggtcttgtgctggtag 354
              ||||||||||||||||||||
Sbjct: 179379 tgtaggtcttgtgctggtag 179360
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>gb|M64372.1|BLYBEG1 Barley embryo globulin (BEG1) mRNA, complete cds
          Length = 2122

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 aagagggccgtggccgaggc 264
           ||||||||||||||||||||
Sbjct: 497 aagagggccgtggccgaggc 516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,277,224
Number of Sequences: 3902068
Number of extensions: 3277224
Number of successful extensions: 60236
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60106
Number of HSP's gapped (non-prelim): 129
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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