>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1
            gene, complete cds
          Length = 4098

 Score =  155 bits (78), Expect = 9e-35
 Identities = 153/173 (88%), Gaps = 4/173 (2%)
 Strand = Plus / Plus

                                                                        
Query: 57   aaaatgctanacatacaaagagttacatgaggttatatgctaactaggattctttctttc 116
            ||||||||| |||||||||||||||||| |||||| | ||| ||||||||||||||||||
Sbjct: 991  aaaatgctagacatacaaagagttacataaggttacaggctgactaggattctttctttc 1050

                                                                        
Query: 117  taactaaccattcccccttgattttcaagggggtgggcccct-attccccttaatctcca 175
            |||||||||  ||||||||||||||||| ||| |||| |||| ||| |||||||||| ||
Sbjct: 1051 taactaacc-gtcccccttgattttcaacgggctggggccctcatttcccttaatcttca 1109

                                                                 
Query: 176  ataaaaact-acctttttatcaaaacctatataaacttatgtatgtgtagcat 227
            || |||| | | |||||| | ||||||||| ||||||||||||||||||||||
Sbjct: 1110 atcaaaattcatcttttt-taaaaacctatgtaaacttatgtatgtgtagcat 1161

>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    tttttatcaaaacctatataa 208
              |||||||||||||||||||||
Sbjct: 819690 tttttatcaaaacctatataa 819670

>emb|AL391995.7| Human DNA sequence from clone RP11-522N4 on chromosome 13, complete
              sequence
          Length = 178920

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 199    acctatataaacttatgtatgtgta 223
              |||||||||||| ||||||||||||
Sbjct: 104780 acctatataaacatatgtatgtgta 104804

>gb|AC162691.2| Mus musculus chromosome 1, clone RP23-263K13, complete sequence
          Length = 173327

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 189   ttttatcaaaacctatataaa 209
             |||||||||||||||||||||
Sbjct: 70720 ttttatcaaaacctatataaa 70740

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 9        gtggattttgattggagatta 29
                |||||||||||||||||||||
Sbjct: 21905688 gtggattttgattggagatta 21905668

>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1114B07
          Length = 148060

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 9      gtggattttgattggagatta 29
              |||||||||||||||||||||
Sbjct: 134981 gtggattttgattggagatta 134961

>gb|AC131750.3| Mus musculus BAC clone RP23-34F5 from 1, complete sequence
          Length = 190325

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 189   ttttatcaaaacctatataaa 209
             |||||||||||||||||||||
Sbjct: 27125 ttttatcaaaacctatataaa 27105

>gb|AC161519.11| Mus musculus chromosome 18, clone RP24-83L9, complete sequence
          Length = 233631

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tataaacttatgtatgtgta 223
             ||||||||||||||||||||
Sbjct: 72859 tataaacttatgtatgtgta 72878

>gb|AC185999.2| Pan troglodytes BAC clone CH251-186C12 from chromosome 9, complete
             sequence
          Length = 169499

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ttgattttcaagggggtggg 153
             ||||||||||||||||||||
Sbjct: 45067 ttgattttcaagggggtggg 45086

>gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromosome 9, complete
             sequence
          Length = 162544

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   ttgattttcaagggggtggg 153
             ||||||||||||||||||||
Sbjct: 64046 ttgattttcaagggggtggg 64027

>gb|AC116180.4| Mus musculus BAC clone RP24-167M11 from chromosome 9, complete sequence
          Length = 149442

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   aataaaaactacctttttat 194
             ||||||||||||||||||||
Sbjct: 70342 aataaaaactacctttttat 70323

>emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chromosome 9, complete
             sequence
          Length = 166687

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   ttgattttcaagggggtggg 153
             ||||||||||||||||||||
Sbjct: 74013 ttgattttcaagggggtggg 73994

>gb|BC036146.1| Mus musculus tissue factor pathway inhibitor, mRNA (cDNA clone
            MGC:37332 IMAGE:4975683), complete cds
          Length = 3065

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   ttttgattggagattaaggg 33
            ||||||||||||||||||||
Sbjct: 2450 ttttgattggagattaaggg 2469

>emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chromosome 9 Contains a
             RAB28, member RAS oncogene family pseudogene (RAB28), a
             pseudogene similar to part of recombining binding protein
             suppressor of hairless (Drosophila) (RBPSUH), two novel
             pseudogenes, a pseudogene similar to part of fibroblast
             growth factor 7 (keratinocyte growth factor) (FGF7), the
             3' end of a novel gene and two CpG islands, complete
             sequence
          Length = 163837

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   ttgattttcaagggggtggg 153
             ||||||||||||||||||||
Sbjct: 84962 ttgattttcaagggggtggg 84943

>emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chromosome 9 Conatins a
             pseudogene similar to part of fibroblast growth factor 7
             (keratinocyte growth factor) (FGF7), two novel
             pseudogenes, a pseudogene similar to part of G
             protein-coupled receptor 116 (GPR116), a novel gene and a
             pseudogene similar to part of meprin A, alpha (PABA
             peptide hydrolase) (MEP1A), complete sequence
          Length = 167646

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ttgattttcaagggggtggg 153
             ||||||||||||||||||||
Sbjct: 96120 ttgattttcaagggggtggg 96139

>emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chromosome 9 Contains a
              pseudogene similar to part of fibroblast growth factor 7
              (keratinocyte growth factor) (FGF7), three novel
              pseudogenes, two novel genes, a recombining binding protein
              suppressor of hairless (Drosophila) (RBPSUH) pseudogene, a
              RAB28, member RAS oncogene family (RAB28) pseudogene and
              two CpG islands, complete sequence
          Length = 202891

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ttgattttcaagggggtggg 153
              ||||||||||||||||||||
Sbjct: 129344 ttgattttcaagggggtggg 129363

>emb|BX005266.6| Human DNA sequence from clone RP11-211N8 on chromosome 9 Contains two
             novel pseudogenes, two novel genes, a recombining binding
             protein suppressor of hairless (Drosophila) (RBPSUH)
             pseudogene, a RAB28, member RAS oncogene family (RAB28)
             pseudogene and a G protein-coupled receptor, family C,
             group 5,member B (GPRC5B) pseudogene, complete sequence
          Length = 157298

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ttgattttcaagggggtggg 153
             ||||||||||||||||||||
Sbjct: 86575 ttgattttcaagggggtggg 86594

>emb|AL512625.10| Human DNA sequence from clone RP11-262H14 on chromosome 9 Contains three
              novel genes, a novel pseudogene, two novel pseudogenes
              (LOC339742), a tumor suppressor deleted in oral
              cancer-related 1 (DOC-1R) pseudogene, a pseudogene similar
              to part of prostaglandin E receptor 4 (subtype EP4)
              (PTGER4), a pseudogene similar to part of myosin VA (heavy
              polypeptide 12, myoxin) (MYO5A), a pseudogene similar to
              part of G protein-coupled receptor 116 (GPR116), a
              pseudogene similar to part of fibroblast growth factor 7
              (keratinocyte growth factor) (FGF7) and five CpG islands,
              complete sequence
          Length = 159539

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ttgattttcaagggggtggg 153
              ||||||||||||||||||||
Sbjct: 131814 ttgattttcaagggggtggg 131833

>emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 on chromosome Xq27.1-27.3
             Contains a CpG island, complete sequence
          Length = 199016

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 188   tttttatcaaaacctatataaact 211
             |||||||||||||| |||||||||
Sbjct: 35122 tttttatcaaaaccaatataaact 35145

>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a
              pseudogene similar to part of a novel protein
              (DKFZp434A171), a pseudogene similar to part of meprin A,
              alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
              similar to part of a novel transmembrane receptor protein
              and two novel pseudogenes, complete sequence
          Length = 189495

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    ttgattttcaagggggtggg 153
              ||||||||||||||||||||
Sbjct: 100040 ttgattttcaagggggtggg 100021

>emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chromosome 9, complete
              sequence
          Length = 166827

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ttgattttcaagggggtggg 153
              ||||||||||||||||||||
Sbjct: 130557 ttgattttcaagggggtggg 130576

>emb|CR606783.1| full-length cDNA clone CS0DE007YB16 of Placenta of Homo sapiens
            (human)
          Length = 1675

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 134  ttgattttcaagggggtggg 153
            ||||||||||||||||||||
Sbjct: 1325 ttgattttcaagggggtggg 1344

>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 35/39 (89%), Gaps = 2/39 (5%)
 Strand = Plus / Minus

                                                     
Query: 105    attctttctttctaactaaccattcccccttgattttca 143
              |||||||||||||| ||||||||  ||| ||||||||||
Sbjct: 181174 attctttctttctagctaaccat--ccctttgattttca 181138



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 205    ataaacttatgtatgtgtagcatt 228
              |||||| |||||||||||||||||
Sbjct: 181075 ataaacctatgtatgtgtagcatt 181052

>emb|CT485615.6| Mouse DNA sequence from clone RP23-32L22 on chromosome 16, complete
              sequence
          Length = 197249

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 174    caataaaaactacctttttatcaa 197
              ||||||||||||| ||||||||||
Sbjct: 101333 caataaaaactacatttttatcaa 101356

>emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on chromosome 9, complete
            sequence
          Length = 186615

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 134  ttgattttcaagggggtggg 153
            ||||||||||||||||||||
Sbjct: 9702 ttgattttcaagggggtggg 9683

>emb|AL356332.1|ATT31P16 Arabidopsis thaliana DNA chromosome 5, BAC clone T31P16 (ESSA project)
          Length = 80088

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   caaaacctatataaacttat 214
             ||||||||||||||||||||
Sbjct: 56151 caaaacctatataaacttat 56170


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,691,772
Number of Sequences: 3902068
Number of extensions: 3691772
Number of successful extensions: 46028
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45959
Number of HSP's gapped (non-prelim): 67
length of query: 270
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 248
effective length of database: 17,147,199,772
effective search space: 4252505543456
effective search space used: 4252505543456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)