ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart21b10 |
|---|---|
| Clone Library Name | barley_pub |
>TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 homolog Length = 692 Score = 30.4 bits (67), Expect = 1.0 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +2 Query: 242 RLPFDVLRSPPTSVGSSPFDLPRHRI 319 ++P RSPPTS +SP+ P+H++ Sbjct: 262 QIPQSAFRSPPTSQCTSPYSSPQHQV 287
>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related| protein E74A) Length = 829 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -3 Query: 170 HPQLHPRAAPHRRGTVAGAAARPIVS 93 HP HP A H T+A AAA S Sbjct: 625 HPHSHPHAGQHTHSTIAAAAAAAAAS 650
>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related| protein E74B) Length = 883 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -3 Query: 170 HPQLHPRAAPHRRGTVAGAAARPIVS 93 HP HP A H T+A AAA S Sbjct: 679 HPHSHPHAGQHTHSTIAAAAAAAAAS 704
>MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 410 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 302 LPRHRICGGLPLPPRARQRVRLV 370 LP + GLPLPPR R+R+ +V Sbjct: 140 LPAYLAARGLPLPPRRRRRIPVV 162
>MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 410 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 302 LPRHRICGGLPLPPRARQRVRLV 370 LP + GLPLPPR R+R+ +V Sbjct: 140 LPAYLAARGLPLPPRRRRRIPVV 162
>FES_MOUSE (P16879) Proto-oncogene tyrosine-protein kinase Fes/Fps (EC| 2.7.10.2) (C-Fes) Length = 820 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +2 Query: 83 HNQTRRWAERRHRLPCP 133 + QTR + E+ HRLPCP Sbjct: 764 NQQTREFVEKGHRLPCP 780
>GRP78_PICAN (Q9HG01) 78 kDa glucose-regulated protein homolog precursor (GRP| 78) (Immunoglobulin heavy chain-binding protein homolog) (BiP) Length = 665 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -1 Query: 262 EDVEGKAEVDARAEQFIRQFRE-ELKLERINSILNYTHALRRTA 134 E++E K E AE+F +Q +E K+E N++ NY H+L+ A Sbjct: 546 EEIEKKIE---EAEKFAQQDKELREKVESRNALENYAHSLKNQA 586
>ILVD_CARHZ (Q3AER0) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 553 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +2 Query: 233 VHLRLPFDVLRSPPTSVGSSPFDLPRHRICGGLPL 337 VHLR + +++ + G PF+LP +C G+ + Sbjct: 48 VHLRTVVEAVKAGVRTAGGVPFELPVIGVCDGIAM 82
>GPA1_EMENI (Q00743) Guanine nucleotide-binding protein alpha subunit| Length = 352 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 280 GCGRGTEDVEGKAEVDARAEQFIRQFREELKLER 179 GCG TED EGK AR E+ Q + + ++R Sbjct: 1 GCGMSTEDKEGK----ARNEEIENQLKRDKMMQR 30
>GPA1_COLTR (O42784) Guanine nucleotide-binding protein alpha subunit| Length = 352 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 280 GCGRGTEDVEGKAEVDARAEQFIRQFREELKLER 179 GCG TED EGK AR E+ Q + + ++R Sbjct: 1 GCGMSTEDKEGK----ARNEEIENQLKRDKMMQR 30
>GPA1_NEUCR (Q05425) Guanine nucleotide-binding protein alpha-1 subunit| (GP1-alpha) Length = 353 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%) Frame = -1 Query: 280 GCGRGTEDVEGKA---EVDARAEQFIRQFREELKL 185 GCG TE+ EGKA E++ + ++ Q R E+K+ Sbjct: 2 GCGMSTEEKEGKARNEEIENQLKRDRMQQRNEIKM 36
>APX8_ORYSA (Q69SV0) Probable L-ascorbate peroxidase 8, chloroplast precursor| (EC 1.11.1.11) Length = 478 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = +3 Query: 228 RASTSAFPSTSSVPRPHP*APRPLTFLGTVSAADCRCRPARASAYASSKLMDSPS 392 R + S P+ S P P P PRP VSAA P +++ +L PS Sbjct: 4 RIAASLLPAASPSPAPSPPPPRP-----RVSAAAAASFPCCSTSAGGLRLRSRPS 53
>ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 480 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Frame = +3 Query: 234 STSAFPSTSSVPRPHP*APRPLTFLGT----VSAADCRCRPARASAYASSKLM 380 S S PS S VP P P PRP T V+ + RP+R A K + Sbjct: 274 SPSPSPSPSPVPAPPPGPPRPAAAAATTAPLVNGRAGKRRPSRLVALREQKAL 326
>GPA1_CRYPA (Q00580) Guanine nucleotide-binding protein alpha subunit| Length = 352 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%) Frame = -1 Query: 280 GCGRGTEDVEGKA---EVDARAEQFIRQFREELKL 185 GCG TE+ EGKA E++ + ++ Q R E+K+ Sbjct: 1 GCGMSTEEKEGKARNEEIENQLKRDRMQQRNEIKM 35
>TAB3_MOUSE (Q571K4) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 (TAK1-binding protein 3) Length = 716 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +2 Query: 242 RLPFDVLRSPPTSVGSSPFDLPRHRI 319 ++P V SPP S SPF P+H++ Sbjct: 286 QIPQSVYHSPPPSQCPSPFSSPQHQV 311
>UBP49_MOUSE (Q6P9L4) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)| (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49) Length = 685 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 50 MLYRANEIFSLHNQTRRWAERRHR 121 M+YR ++ LH + RW+ R HR Sbjct: 538 MIYRLPQVLRLHLKRFRWSGRNHR 561
>RTX2A_ACTPL (P15377) RTX-II toxin determinant A (APX-IIA) (Hemolysin IIA)| (HLY-IIA) (Cytolysin IIA) (CLY-IIA) Length = 956 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -1 Query: 250 GKAEVDARAEQFIRQFREELKLERINSILNYTHALRRTAGAR*PVPPLGP 101 GKA VDA E + + ++L+ N I+N ++ R+T P L P Sbjct: 496 GKAYVDAFEEGQHQSYDSSVQLDNKNGIINISNTNRKTQSVLFRTPLLTP 545
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 27.3 bits (59), Expect = 8.8 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1 Query: 73 YFVCSVQHF*LMDHSHRECNSST 5 YF+CS+Q F L+ +S C S T Sbjct: 122 YFICSIQDFKLVHNSQACCRSPT 144
>PTPRM_HUMAN (P28827) Receptor-type tyrosine-protein phosphatase mu precursor (EC| 3.1.3.48) (Protein-tyrosine phosphatase mu) (R-PTP-mu) Length = 1452 Score = 27.3 bits (59), Expect = 8.8 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = -3 Query: 173 LHPQLHPRAAPHRRGTVAGAAARPIVSFDCVERIFRLLCTAFLIDGSFPQRMQQQY 6 L PQ P HR G + + D + RIFR+ A DG RM QQ+ Sbjct: 1294 LCPQYWPENGVHRHGPIQVEFVSADLEEDIISRIFRIYNAARPQDG---YRMVQQF 1346
>MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substrate (MARCKS)| Length = 280 Score = 27.3 bits (59), Expect = 8.8 Identities = 18/77 (23%), Positives = 30/77 (38%) Frame = -1 Query: 412 ASKAEVGDGESISLDEAYALARAGRQRQSAADTVPRKVKGRGAYGCGRGTEDVEGKAEVD 233 A+K E GD + DEA G + +A + ++ + + A G G E + Sbjct: 193 AAKEEAGDSQEAKSDEAAPEKATGEEAPAAEEQQQQQQQEKAAEEAGAAATSEAGSGEQE 252 Query: 232 ARAEQFIRQFREELKLE 182 A + R+E E Sbjct: 253 AAPAEEPAAARQEAPSE 269
>AKAP9_HUMAN (Q99996) A-kinase anchor protein 9 (Protein kinase A-anchoring| protein 9) (PRKA9) (A-kinase anchor protein 450 kDa) (AKAP 450) (A-kinase anchor protein 350 kDa) (AKAP 350) (hgAKAP 350) (AKAP 120-like protein) (Hyperion protein) (Yotiao protei Length = 3911 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Frame = -1 Query: 409 SKAEVGDGESISLDEAYALARAGR--QRQSAADTVPRKVKG 293 S ++ G G ++ + + +A GR + +SA D+ P+K+KG Sbjct: 2909 SGSDWGQGIYLTHSQGFDIASEGRGEESESATDSFPKKIKG 2949
>GPA1_MAGGR (O13315) Guanine nucleotide-binding protein alpha subunit| Length = 352 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%) Frame = -1 Query: 280 GCGRGTEDVEGKA---EVDARAEQFIRQFREELKL 185 GCG TE+ EGKA E++ + ++ Q R E+K+ Sbjct: 1 GCGMSTEEKEGKARNEEIENQLKRDRLQQRNEIKM 35
>CATA_STRCO (Q9Z598) Catalase (EC 1.11.1.6)| Length = 487 Score = 27.3 bits (59), Expect = 8.8 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Frame = -1 Query: 409 SKAEVGDGESISLDEAYALARAGRQRQSAADTVPRKV---KGRGAYGCGRGTEDVEGKAE 239 + A G G + + + + + + R + + +P +V +G GAYG T+DV G Sbjct: 19 NSASAGIGGPLLIQDQHLIEKLARFNR---ERIPERVVHARGSGAYGHFEVTDDVSGFTH 75 Query: 238 VD------ARAEQFIR 209 D R E F+R Sbjct: 76 ADFLNTVGKRTEVFLR 91
>UBP49_HUMAN (Q70CQ1) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)| (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49) Length = 688 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 50 MLYRANEIFSLHNQTRRWAERRHR 121 M+YR ++ LH + RW+ R HR Sbjct: 541 MIYRLPQVLRLHLKRFRWSGRNHR 564 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,081,207 Number of Sequences: 219361 Number of extensions: 847109 Number of successful extensions: 3462 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3388 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3461 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
