ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart21b08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transferase mRNA, complete cds Length = 1092 Score = 793 bits (400), Expect = 0.0 Identities = 403/404 (99%) Strand = Plus / Minus Query: 1 aaatcaaatcgactcacagccttcttaatttattcatcgcatggagcgggtatagaaatg 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1057 aaatcaaatcgactcacagccttcttaatttattcatcgcacggagcgggtatagaaatg 998 Query: 61 gaatcgcaggtggcaactcggtgctgcccccaccgaagaccagggttgacacatgacaca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 gaatcgcaggtggcaactcggtgctgcccccaccgaagaccagggttgacacatgacaca 938 Query: 121 cacatagagcaggagagcacaacacgcacccacactgcctgacccaaccatatactacca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 cacatagagcaggagagcacaacacgcacccacactgcctgacccaaccatatactacca 878 Query: 181 accactcacacgcgaacaatttattccactaataaagaaagaaatatccaaacgcacgca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 877 accactcacacgcgaacaatttattccactaataaagaaagaaatatccaaacgcacgca 818 Query: 241 ctgcaggccacccaaatcgctccataatttttatctgtagcttccttccggcaggccggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 ctgcaggccacccaaatcgctccataatttttatctgtagcttccttccggcaggccggc 758 Query: 301 cggccggccggcttgcgcgtgcatggcggtccgccggcgcgcctactcgatgccgtacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 cggccggccggcttgcgcgtgcatggcggtccgccggcgcgcctactcgatgccgtacct 698 Query: 361 cttcttaagcaggccgatgaagtcgtagaccttctcgggcgagt 404 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 cttcttaagcaggccgatgaagtcgtagaccttctcgggcgagt 654
>gb|BT009437.1| Triticum aestivum clone wlmk4.pk0012.c2:fis, full insert mRNA sequence Length = 1966 Score = 141 bits (71), Expect = 2e-30 Identities = 163/190 (85%), Gaps = 4/190 (2%) Strand = Plus / Minus Query: 83 gctgcccccaccgaagaccagggttgacacat-gacacacacatagagcaggagagcaca 141 |||||| |||| |||||||||||||||||||| |||||||||| | || ||| | || Sbjct: 990 gctgccaccactgaagaccagggttgacacattgacacacacacat--cacgagtacgca 933 Query: 142 acacgcacccacactgcctgacccaaccatatactaccaaccactcacacgcg-aacaat 200 |||||||||||||||| |||||||||||| ||| ||||||||| ||||| || |||| | Sbjct: 932 acacgcacccacactgactgacccaaccaactaccaccaaccacacacacacggaacact 873 Query: 201 ttattccactaataaagaaagaaatatccaaacgcacgcactgcaggccacccaaatcgc 260 ||||||||| || ||||||| ||||||||| ||| ||||| || |||||||||||||||| Sbjct: 872 ttattccacgaagaaagaaacaaatatccagacgtacgcattgtaggccacccaaatcgc 813 Query: 261 tccataattt 270 ||||| |||| Sbjct: 812 tccatgattt 803 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 342 cctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcg 401 ||||||||||||||||| ||||||| |||||||||||||||||||| ||||| || |||| Sbjct: 736 cctactcgatgccgtacttcttcttgagcaggccgatgaagtcgtacaccttgtccggcg 677 Query: 402 agt 404 ||| Sbjct: 676 agt 674
>dbj|AB207242.1| Hordeum vulgare mRNA for glutathione-S-transferase, complete cds Length = 669 Score = 123 bits (62), Expect = 5e-25 Identities = 62/62 (100%) Strand = Plus / Minus Query: 343 ctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcga 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 ctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcga 610 Query: 403 gt 404 || Sbjct: 609 gt 608
>emb|AJ414697.1|TAE414697 Triticum aestivum mRNA for glutathione transferase (gstu1A gene) Length = 1085 Score = 117 bits (59), Expect = 3e-23 Identities = 69/71 (97%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 55 gaaatggaatcgcaggtggcaactcggtgctgcccccaccgaagaccagggttgacaca- 113 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1023 gaaatggaatggcaggtggcaactcggtgctgcccccaccgaagaccagggttgacacat 964 Query: 114 tgacacacaca 124 ||||||||||| Sbjct: 963 tgacacacaca 953 Score = 103 bits (52), Expect = 4e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 329 gtccgccggcgcgcctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtag 388 ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 728 gtccgtcggcgcgcctactcgatgccgtacttcttcttgagcaggccgatgaagtcgtac 669 Query: 389 accttctcgggcgagt 404 ||||| || ||||||| Sbjct: 668 accttgtccggcgagt 653 Score = 46.1 bits (23), Expect = 0.088 Identities = 35/39 (89%) Strand = Plus / Minus Query: 225 tatccaaacgcacgcactgcaggccacccaaatcgctcc 263 |||||| ||| ||||| || ||||||||||||||||||| Sbjct: 831 tatccagacgtacgcattgtaggccacccaaatcgctcc 793
>emb|AJ414699.1|TAE414699 Triticum aestivum mRNA for glutathione transferase (gstu1C gene) Length = 1008 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 337 gcgcgcctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctc 396 ||||| |||||||||||||||| ||||||| |||||||||||||||||||| ||||| || Sbjct: 728 gcgcggctactcgatgccgtacttcttcttgagcaggccgatgaagtcgtacaccttgtc 669 Query: 397 gggcgagt 404 ||||||| Sbjct: 668 cggcgagt 661 Score = 46.1 bits (23), Expect = 0.088 Identities = 49/58 (84%), Gaps = 6/58 (10%) Strand = Plus / Minus Query: 20 ccttcttaatttattcatcgcatggagcgggtatagaaatggaatcgcaggtggcaac 77 |||||||||||||||||||||| ||| || |||||||||||||||||||||| Sbjct: 984 ccttcttaatttattcatcgcacgga------atgaaaatggaatcgcaggtggcaac 933
>emb|AJ414698.1|TAE414698 Triticum aestivum mRNA for glutathione transferase (gstu1B gene) Length = 1051 Score = 77.8 bits (39), Expect = 2e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 342 cctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcg 401 ||||||| ||||||||| ||||||| |||||||||||||||||||| ||||| || |||| Sbjct: 711 cctactctatgccgtacttcttcttgagcaggccgatgaagtcgtacaccttgtccggcg 652 Query: 402 agt 404 ||| Sbjct: 651 agt 649 Score = 69.9 bits (35), Expect = 6e-09 Identities = 112/134 (83%), Gaps = 4/134 (2%) Strand = Plus / Minus Query: 140 caacacgcacccacactgcctgacccaaccatatactaccaaccac--tcacacgcgaac 197 |||||||||||||||||| |||||||||||| ||| ||||||||| ||||||| |||| Sbjct: 910 caacacgcacccacactgactgacccaaccaactaccaccaaccacactcacacg-gaac 852 Query: 198 aatttattccactaataaagaaagaaatatccaa-acgcacgcactgcaggccacccaaa 256 | ||| |||| | || ||||||| ||| |||| ||| |||| || |||||||||||| Sbjct: 851 actttcttccccgaaaaaagaaaccaatttccaccacgttcgcattgtaggccacccaaa 792 Query: 257 tcgctccataattt 270 ||||||||| |||| Sbjct: 791 tcgctccatgattt 778
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 343 ctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcga 402 |||||||| ||||||| ||||||| || | ||||| |||||||||||||||||| ||||| Sbjct: 32315537 ctactcgacgccgtacttcttcttgaggacgccgacgaagtcgtagaccttctccggcga 32315596 Query: 403 g 403 | Sbjct: 32315597 g 32315597
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 343 ctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcga 402 |||||||| ||||||| ||||||| || | ||||| |||||||||||||||||| ||||| Sbjct: 49304 ctactcgacgccgtacttcttcttgaggacgccgacgaagtcgtagaccttctccggcga 49363 Query: 403 g 403 | Sbjct: 49364 g 49364
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 343 ctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcga 402 |||||||| ||||||| ||||||| || | ||||| |||||||||||||||||| ||||| Sbjct: 32406047 ctactcgacgccgtacttcttcttgaggacgccgacgaagtcgtagaccttctccggcga 32406106 Query: 403 g 403 | Sbjct: 32406107 g 32406107
>dbj|AK105407.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F01, full insert sequence Length = 2644 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 343 ctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcga 402 |||||||| ||||||| ||||||| || | ||||| |||||||||||||||||| ||||| Sbjct: 2427 ctactcgacgccgtacttcttcttgaggacgccgacgaagtcgtagaccttctccggcga 2368 Query: 403 g 403 | Sbjct: 2367 g 2367
>dbj|AK103358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126L16, full insert sequence Length = 944 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 343 ctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcga 402 |||||||| ||||||| ||||||| || | ||||| |||||||||||||||||| ||||| Sbjct: 747 ctactcgacgccgtacttcttcttgaggacgccgacgaagtcgtagaccttctccggcga 688 Query: 403 g 403 | Sbjct: 687 g 687
>gb|AF050102.1|AF050102 Oryza sativa glutathione s-transferase (GST1) mRNA, complete cds Length = 945 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 343 ctactcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcga 402 |||||||| ||||||| ||||||| || | ||||| |||||||||||||||||| ||||| Sbjct: 701 ctactcgacgccgtacttcttcttgaggacgccgacgaagtcgtagaccttctccggcga 642 Query: 403 g 403 | Sbjct: 641 g 641
>ref|NM_190795.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1680 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 290 ggcaggccggccggccggccggc 312 ||||||||||||||||||||||| Sbjct: 1607 ggcaggccggccggccggccggc 1585
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccggc 312 ||||||||||||||||||||||| Sbjct: 74890 ggcaggccggccggccggccggc 74912
>emb|Y12862.1|ZMY12862 Zea mays mRNA for glutathione transferase Length = 947 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 379 gaagtcgtagaccttctcgggcg 401 ||||||||||||||||||||||| Sbjct: 674 gaagtcgtagaccttctcgggcg 652
>gb|AC111069.9| Mus musculus chromosome 18, clone RP24-164O22, complete sequence Length = 183457 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccggc 312 ||||||||||||||||||||||| Sbjct: 80522 ggcaggccggccggccggccggc 80544 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 caggccggccggccggccggc 312 ||||||||||||||||||||| Sbjct: 80551 caggccggccggccggccggc 80531
>gb|BT009150.1| Triticum aestivum clone wl1n.pk0062.h4:fis, full insert mRNA sequence Length = 993 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 379 gaagtcgtagaccttctcgggcg 401 ||||||||||||||||||||||| Sbjct: 742 gaagtcgtagaccttctcgggcg 720
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccggc 312 ||||||||||||||||||||||| Sbjct: 1754675 ggcaggccggccggccggccggc 1754697
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccggc 312 ||||||||||||||||||||||| Sbjct: 37748987 ggcaggccggccggccggccggc 37749009 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 caggccggccggccggccggc 312 ||||||||||||||||||||| Sbjct: 37479776 caggccggccggccggccggc 37479796 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 cggcaggccggccggccggccggc 312 |||| ||||||||||||||||||| Sbjct: 7239130 cggctggccggccggccggccggc 7239107
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccggc 312 ||||||||||||||||||||||| Sbjct: 77288 ggcaggccggccggccggccggc 77310
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccggc 312 ||||||||||||||||||||||| Sbjct: 79824 ggcaggccggccggccggccggc 79846
>gb|AY103716.1| Zea mays PCO118532 mRNA sequence Length = 1237 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 379 gaagtcgtagaccttctcgggcg 401 ||||||||||||||||||||||| Sbjct: 913 gaagtcgtagaccttctcgggcg 891
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccggc 312 ||||||||||||||||||||||| Sbjct: 171554 ggcaggccggccggccggccggc 171576 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 ccggcaggccggccggccggcc 309 |||||||||||||||||||||| Sbjct: 293736 ccggcaggccggccggccggcc 293715
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccggc 312 ||||||||||||||||||||||| Sbjct: 8235 ggcaggccggccggccggccggc 8257
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 280 gcttccttccggcaggccggcc 301 |||||||||||||||||||||| Sbjct: 1877991 gcttccttccggcaggccggcc 1878012
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 gccggccggccggccggcttgc 316 |||||||||||||||||||||| Sbjct: 1358738 gccggccggccggccggcttgc 1358759
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 ccggcaggccggccggccggcc 309 |||||||||||||||||||||| Sbjct: 26581856 ccggcaggccggccggccggcc 26581877 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccg 310 ||||||||||||||||||||| Sbjct: 26465868 ggcaggccggccggccggccg 26465888 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gcaggccggccggccggccg 310 |||||||||||||||||||| Sbjct: 35333881 gcaggccggccggccggccg 35333900 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccttcttaatttattcatcg 39 |||||||||||||||||||| Sbjct: 4116807 ccttcttaatttattcatcg 4116826
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gcaggccggccggccggccggc 312 |||||||||||||||||||||| Sbjct: 2245822 gcaggccggccggccggccggc 2245801
>gb|AF463713.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence Length = 2444 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ggcaggccggccggccggccgg 311 |||||||||||||||||||||| Sbjct: 2239 ggcaggccggccggccggccgg 2218
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 ccggcaggccggccggccggcc 309 |||||||||||||||||||||| Sbjct: 124237 ccggcaggccggccggccggcc 124258 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccg 310 ||||||||||||||||||||| Sbjct: 8249 ggcaggccggccggccggccg 8269
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 ccggcaggccggccggccggcc 309 |||||||||||||||||||||| Sbjct: 16017 ccggcaggccggccggccggcc 16038
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 280 gcttccttccggcaggccggcc 301 |||||||||||||||||||||| Sbjct: 1898857 gcttccttccggcaggccggcc 1898878
>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23, complete sequence Length = 156572 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 caggccggccggccggccggc 312 ||||||||||||||||||||| Sbjct: 100687 caggccggccggccggccggc 100667
>gb|AY550532.1| Salmo salar clone Hae459R microsatellite sequence Length = 463 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 caactcggtgctgcccccacc 94 ||||||||||||||||||||| Sbjct: 76 caactcggtgctgcccccacc 96
>gb|AC122273.4| Mus musculus BAC clone RP23-228B2 from 9, complete sequence Length = 196627 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 ggccggccggccggccggctt 314 ||||||||||||||||||||| Sbjct: 48882 ggccggccggccggccggctt 48862
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 cggccggcttgcgcgtgcatg 325 ||||||||||||||||||||| Sbjct: 72822 cggccggcttgcgcgtgcatg 72802
>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 243990 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 agggttgacacatgacacacacata 126 |||| |||||||||||||||||||| Sbjct: 157300 agggatgacacatgacacacacata 157324
>ref|XM_627133.1| Cryptosporidium parvum Iowa II brahma like protein (cgd8_2300), partial mRNA Length = 5022 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 attccactaataaagaaagaa 223 ||||||||||||||||||||| Sbjct: 1538 attccactaataaagaaagaa 1558
>dbj|AK084393.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230036B02 product:unclassifiable, full insert sequence Length = 3859 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 caggccggccggccggccggc 312 ||||||||||||||||||||| Sbjct: 2593 caggccggccggccggccggc 2573 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aggccggccggccggccggc 312 |||||||||||||||||||| Sbjct: 2571 aggccggccggccggccggc 2590
>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215953 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 102 agggttgacacatgacacacacata 126 |||| |||||||||||||||||||| Sbjct: 200389 agggatgacacatgacacacacata 200365
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 347 tcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcgag 403 ||||||||||| |||| | || ||||||||||||||||||| || ||| |||||| Sbjct: 16621508 tcgatgccgtagtgcttcctgaggaggccgatgaagtcgtagatctcctccggcgag 16621452
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 caggccggccggccggccggc 312 ||||||||||||||||||||| Sbjct: 11375410 caggccggccggccggccggc 11375390 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aggccggccggccggccggc 312 |||||||||||||||||||| Sbjct: 28588848 aggccggccggccggccggc 28588867 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 aggccggccggccggccggc 312 |||||||||||||||||||| Sbjct: 24284920 aggccggccggccggccggc 24284901
>gb|AC092608.2| Homo sapiens BAC clone RP11-154F14 from 4, complete sequence Length = 196952 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 attccactaataaagaaagaa 223 ||||||||||||||||||||| Sbjct: 105958 attccactaataaagaaagaa 105978
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 caggccggccggccggccggc 312 ||||||||||||||||||||| Sbjct: 74313 caggccggccggccggccggc 74333
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggccg 310 ||||||||||||||||||||| Sbjct: 65784 ggcaggccggccggccggccg 65804
>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0003B09 Length = 161813 Score = 42.1 bits (21), Expect = 1.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 347 tcgatgccgtacctcttcttaagcaggccgatgaagtcgtagaccttctcgggcgag 403 ||||||||||| |||| | || ||||||||||||||||||| || ||| |||||| Sbjct: 112128 tcgatgccgtagtgcttcctgaggaggccgatgaagtcgtagatctcctccggcgag 112072
>dbj|AK105890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E06, full insert sequence Length = 1012 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 371 aggccgatgaagtcgtagaccttctcgggcgag 403 ||||||||||||||||||| || ||| |||||| Sbjct: 761 aggccgatgaagtcgtagatctcctccggcgag 729
>dbj|AK069604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025D08, full insert sequence Length = 1101 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 371 aggccgatgaagtcgtagaccttctcgggcgag 403 ||||||||||||||||||| || ||| |||||| Sbjct: 838 aggccgatgaagtcgtagatctcctccggcgag 806
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggcc 309 |||||||||||||||||||| Sbjct: 101085 ggcaggccggccggccggcc 101104
>ref|XM_523098.1| PREDICTED: Pan troglodytes similar to RNA-binding protein with multiple splicing 2 (LOC467704), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ggccggccggccggccggct 313 |||||||||||||||||||| Sbjct: 233 ggccggccggccggccggct 252
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aggccggccggccggccggc 312 |||||||||||||||||||| Sbjct: 16640 aggccggccggccggccggc 16659
>gb|AC093102.2| Drosophila melanogaster clone BACR34C10, complete sequence Length = 179428 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 gctccataatttttatctgt 278 |||||||||||||||||||| Sbjct: 9702 gctccataatttttatctgt 9683
>gb|AC132852.12| Mus musculus chromosome 9, clone RP24-298N7, complete sequence Length = 183786 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggcaggccggccggccggcc 309 |||||||||||||||||||| Sbjct: 117561 ggcaggccggccggccggcc 117580
>gb|DQ496100.1| Homo sapiens hephaestin (HEPH) gene, complete cds Length = 108572 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 106013 aataaagaaagaaatatcca 105994
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aggccggccggccggccggc 312 |||||||||||||||||||| Sbjct: 116541 aggccggccggccggccggc 116560
>gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I, complete sequence Length = 99587 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aggccggccggccggccggc 312 |||||||||||||||||||| Sbjct: 3700 aggccggccggccggccggc 3719
>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04, complete sequence Length = 96328 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 aggccggccggccggccggc 312 |||||||||||||||||||| Sbjct: 50656 aggccggccggccggccggc 50637
>gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome 14, complete sequence Length = 225721 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cactaataaagaaagaaata 226 |||||||||||||||||||| Sbjct: 137428 cactaataaagaaagaaata 137409
>gb|AY358990.1| Homo sapiens clone DNA104875 HEPH (UNQ2562) mRNA, complete cds Length = 4333 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 3761 aataaagaaagaaatatcca 3742
>emb|CR792428.10| Zebrafish DNA sequence from clone CH211-148F24 in linkage group 3, complete sequence Length = 120268 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 cggcaggccggccggccggccggc 312 |||| ||||||||||||||||||| Sbjct: 105295 cggccggccggccggccggccggc 105272
>emb|Z82254.1|HSU46H11 Human DNA sequence from clone LL0XNC01-46H11 on chromosome X Contains the 3' end of the gene for a novel protein (LOC170242), a novel gene and a CpG island, complete sequence Length = 38540 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 ataatttttatctgtagcttcctt 287 |||||||| ||||||||||||||| Sbjct: 36653 ataattttaatctgtagcttcctt 36676
>ref|NM_014799.2| Homo sapiens hephaestin (HEPH), transcript variant 2, mRNA Length = 4231 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 3665 aataaagaaagaaatatcca 3646
>ref|NM_138737.1| Homo sapiens hephaestin (HEPH), transcript variant 1, mRNA Length = 4279 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 3697 aataaagaaagaaatatcca 3678
>emb|AL157698.8| Human DNA sequence from clone RP13-238N7 on chromosome Xq12-13.3 Contains the 3' end of the HEPH gene for hephaestin and a likely ortholog of chicken chondrocyte protein with a poly-proline region (CHPPR) pseudogene, complete sequence Length = 143638 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 15067 aataaagaaagaaatatcca 15048
>gb|AC092931.8| Homo sapiens 3 BAC RP11-131O20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152737 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 attccactaataaagaaagaaata 226 |||||||||||||| ||||||||| Sbjct: 68189 attccactaataaacaaagaaata 68212
>gb|AC093120.4| Mus musculus Strain C57BL6/J Chromosome 6 BAC, RP23-125A24, Complete Sequence, complete sequence Length = 187794 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 cggcaggccggccggccggccggc 312 |||| ||||||||||||||||||| Sbjct: 92751 cggctggccggccggccggccggc 92728 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aggccggccggccggccggc 312 |||||||||||||||||||| Sbjct: 92726 aggccggccggccggccggc 92745
>gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosome 6, complete sequence Length = 191467 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 cggcaggccggccggccggccggc 312 |||| ||||||||||||||||||| Sbjct: 175406 cggctggccggccggccggccggc 175383 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aggccggccggccggccggc 312 |||||||||||||||||||| Sbjct: 175381 aggccggccggccggccggc 175400
>emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment 22/24 Length = 299050 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 gcaactcggtgctgcccccaccga 96 |||||||||||||||| ||||||| Sbjct: 157810 gcaactcggtgctgcctccaccga 157833
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ggccggccggccggccggct 313 |||||||||||||||||||| Sbjct: 194686 ggccggccggccggccggct 194667
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgcctactcgatgccgtacc 359 |||||||||||||||||||| Sbjct: 68732 cgcctactcgatgccgtacc 68751
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23, complete sequence Length = 133759 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggcaggccggccggccggcc 309 |||||||||||||||||||| Sbjct: 85660 ggcaggccggccggccggcc 85641
>emb|AJ296162.2|HSA296162 Homo sapiens mRNA for hephaestin (HEPH gene) Length = 4854 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 4292 aataaagaaagaaatatcca 4273
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06, complete sequence Length = 174019 Score = 40.1 bits (20), Expect = 5.4 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 297 cggccggccggccggcttgcgcgtgcatggcggtccgcc 335 ||||| |||||||||| |||||||| |||||||||||| Sbjct: 9976 cggccagccggccggc--gcgcgtgcgtggcggtccgcc 9940
>dbj|AK022472.1| Homo sapiens cDNA FLJ12410 fis, clone MAMMA1002938, highly similar to Homo sapiens mRNA for KIAA0698 protein Length = 2621 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 577 aataaagaaagaaatatcca 558
>gb|AC093795.3| Homo sapiens BAC clone RP11-299P3 from 4, complete sequence Length = 183917 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 attccactaataaagaaagaaata 226 |||||||||||||| ||||||||| Sbjct: 61759 attccactaataaacaaagaaata 61736
>gb|AC091654.4| Homo sapiens BAC clone RP11-177C9 from 7, complete sequence Length = 116507 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcacagccttcttaatttat 33 |||||||||||||||||||| Sbjct: 11950 tcacagccttcttaatttat 11969
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggcaggccggccggccggcc 309 |||||||||||||||||||| Sbjct: 19797198 ggcaggccggccggccggcc 19797179
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.4 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 297 cggccggccggccggcttgcgcgtgcatggcggtccgcc 335 ||||| |||||||||| |||||||| |||||||||||| Sbjct: 15838452 cggccagccggccggc--gcgcgtgcgtggcggtccgcc 15838416
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ggccggccggccggccggct 313 |||||||||||||||||||| Sbjct: 22961914 ggccggccggccggccggct 22961933
>gb|AC007300.6|AC007300 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR09I15, complete sequence Length = 169090 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gctccataatttttatctgt 278 |||||||||||||||||||| Sbjct: 15989 gctccataatttttatctgt 16008
>gb|AF148860.1|AF148860 Homo sapiens hephaestin (HEPH) mRNA, complete cds Length = 4215 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 3653 aataaagaaagaaatatcca 3634
>gb|AF244684.1|AF244684 Zea mays glutathione S-transferase GST 19 mRNA, complete cds Length = 948 Score = 40.1 bits (20), Expect = 5.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 343 ctactcgatgccgtacctcttcttaagcaggccgatgaagtcgt 386 ||||||||||||||| ||||||| |||||| |||||| |||| Sbjct: 695 ctactcgatgccgtaggtcttcttgagcaggttgatgaactcgt 652
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 cggcaggccggccggccggccggc 312 |||| ||||||||||||||||||| Sbjct: 133778 cggctggccggccggccggccggc 133755
>gb|AC121344.5| Homo sapiens X BAC RP11-408N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111500 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 taataaagaaagaaatatccaaac 233 ||||||| |||||||||||||||| Sbjct: 16810 taataaacaaagaaatatccaaac 16787
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tccggcaggccggccggccggccg 310 |||||| ||||||||||||||||| Sbjct: 1904179 tccggcgggccggccggccggccg 1904202
>gb|AY148159.1| Mus musculus lamin B receptor gene, partial cds Length = 27286 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggcaggccggccggccggcc 309 |||||||||||||||||||| Sbjct: 16121 ggcaggccggccggccggcc 16102
>gb|AY148158.1| Mus musculus lamin B receptor gene, partial cds Length = 29007 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggcaggccggccggccggcc 309 |||||||||||||||||||| Sbjct: 15833 ggcaggccggccggccggcc 15814
>gb|AC092927.5| Homo sapiens 3 BAC RP11-791I24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179542 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ggccggccggccggccggct 313 |||||||||||||||||||| Sbjct: 100088 ggccggccggccggccggct 100107
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 cggcaggccggccggccggccggc 312 |||| ||||||||||||||||||| Sbjct: 40560 cggctggccggccggccggccggc 40537
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gcaggccggccggccggccg 310 |||||||||||||||||||| Sbjct: 84215 gcaggccggccggccggccg 84234
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccttcttaatttattcatcg 39 |||||||||||||||||||| Sbjct: 26821 ccttcttaatttattcatcg 26840
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccttcttaatttattcatcg 39 |||||||||||||||||||| Sbjct: 163473 ccttcttaatttattcatcg 163492
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ggccggccggccggccggct 313 |||||||||||||||||||| Sbjct: 135752 ggccggccggccggccggct 135771
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ggccggccggccggccggct 313 |||||||||||||||||||| Sbjct: 21642 ggccggccggccggccggct 21661
>emb|X58873.1|SLTRNAG1 S.lividans genes for tRNA-Glu and tRNA-Gln Length = 1480 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgcctactcgatgccgtacc 359 |||||||||||||||||||| Sbjct: 1194 cgcctactcgatgccgtacc 1213
>gb|BC011561.1| Homo sapiens hephaestin, transcript variant 1, mRNA (cDNA clone MGC:20135 IMAGE:4644318), complete cds Length = 4279 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 3697 aataaagaaagaaatatcca 3678
>gb|AE003629.2| Drosophila melanogaster chromosome 2L, section 38 of 83 of the complete sequence Length = 261176 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gctccataatttttatctgt 278 |||||||||||||||||||| Sbjct: 72634 gctccataatttttatctgt 72653
>dbj|AP002342.3| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2258N2, complete sequences Length = 174548 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 caactcggtgctgcccccac 93 |||||||||||||||||||| Sbjct: 75707 caactcggtgctgcccccac 75688
>dbj|AB000922.1| Milk vetch dwarf virus genome segment 3 encoding virus replication-associated protein, complete sequence Length = 1000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 caaatcgctccataattttt 272 |||||||||||||||||||| Sbjct: 394 caaatcgctccataattttt 375
>dbj|D50304.1|THETSA15B1 Theileria sergenti gene for piroplasm surface antigen, partial cds Length = 814 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ccgatgaagtcgtagacctt 393 |||||||||||||||||||| Sbjct: 460 ccgatgaagtcgtagacctt 441
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccggcaggccggccggccgg 307 |||||||||||||||||||| Sbjct: 291487 ccggcaggccggccggccgg 291468
>gb|AC005111.1|AC005111 Drosophila melanogaster DNA sequence (P1 DS01895 (D306)), complete sequence Length = 75551 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 gctccataatttttatctgt 278 |||||||||||||||||||| Sbjct: 29145 gctccataatttttatctgt 29126
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.4 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 297 cggccggccggccggcttgcgcgtgcatggcggtccgcc 335 ||||| |||||||||| |||||||| |||||||||||| Sbjct: 15846693 cggccagccggccggc--gcgcgtgcgtggcggtccgcc 15846657
>emb|BX088570.6| Mouse DNA sequence from clone RP23-292J1 on chromosome 4, complete sequence Length = 244187 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ccagggttgacacatgacac 119 |||||||||||||||||||| Sbjct: 182527 ccagggttgacacatgacac 182546
>dbj|D87197.1| Theileria sp. gene for major piroplasm surface protein, complete cds, clone:CJ28-28 Length = 852 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ccgatgaagtcgtagacctt 393 |||||||||||||||||||| Sbjct: 515 ccgatgaagtcgtagacctt 496
>dbj|D87191.1| Theileria sp. gene for major piroplasm surface protein, complete cds, clone:CB10 Length = 852 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ccgatgaagtcgtagacctt 393 |||||||||||||||||||| Sbjct: 515 ccgatgaagtcgtagacctt 496
>dbj|D87205.1| Theileria sp. gene for major piroplasm surface protein, complete cds, clone:OK3 Length = 852 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ccgatgaagtcgtagacctt 393 |||||||||||||||||||| Sbjct: 515 ccgatgaagtcgtagacctt 496
>dbj|D87202.1| Theileria sp. gene for major piroplasm surface protein, complete cds, clone:DJ2 Length = 852 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ccgatgaagtcgtagacctt 393 |||||||||||||||||||| Sbjct: 515 ccgatgaagtcgtagacctt 496
>dbj|AB070942.1| Streptomyces avermitilis polyketide-2 biosynthetic gene cluster Length = 27522 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tccggcaggccggccggccggccg 310 |||||| ||||||||||||||||| Sbjct: 13979 tccggcgggccggccggccggccg 14002
>dbj|AB014598.2| Homo sapiens mRNA for KIAA0698 protein, partial cds Length = 4228 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aataaagaaagaaatatcca 230 |||||||||||||||||||| Sbjct: 3665 aataaagaaagaaatatcca 3646 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,227,334 Number of Sequences: 3902068 Number of extensions: 5227334 Number of successful extensions: 117348 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 115641 Number of HSP's gapped (non-prelim): 1592 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
