ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart21b07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009410.1| Triticum aestivum clone wlm96.pk061.i14:fis, full insert mRNA sequence Length = 1317 Score = 680 bits (343), Expect = 0.0 Identities = 406/427 (95%) Strand = Plus / Minus Query: 45 tacaacaaattgaccacttaatccagtgacaattcctcttcatggggacgcatgcacgtg 104 |||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1209 tacaacgaattgacctcttaatccagtgtcaattcctcttcatggggacgcatgcatgtg 1150 Query: 105 ccccgtggcgtgcaacaccatcgtctccacggtgagccccggcccgaaggtcatcatcac 164 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1149 cccagtggcgtgcaacaccatcgtctccacggtgagccccggcccgaaggtcatcaccac 1090 Query: 165 accccactccggcacgccgccgaccccttgctgctccctaagcctccgccgcagctcgtc 224 ||||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||| Sbjct: 1089 accccactccggcgcgccgccggccccttcctgctccctaagcctccggcgcagctcgtc 1030 Query: 225 gagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctcagcacccggcggct 284 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1029 gagaacaaatataattgtcacgccgaacatgttgccgtagtcgctcagcacccggcggct 970 Query: 285 cgccgccagcttctccggctcgagctggagcaccgtgtcaatgcgatccagtatggcaga 344 ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 969 cgccgccagcttctccggctcgagctggagcaccgtgtcgatgcggtccagaatggcaga 910 Query: 345 cgagccggggtgcaccgcccagaagaggtcgttccatttcgcggcgatgccgagcggctc 404 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 909 cgacccggggtgcaccgcccagaagaggtcgttccatttcgcgccgatgccgagcggctc 850 Query: 405 aagcgagtcgtggaggcaccgctcgacgttgtccccgatgaacactgggacctgcctcgt 464 ||||||||||||||||||||||||||||||||||| |||||||| ||||| | |||||| Sbjct: 849 cagcgagtcgtggaggcaccgctcgacgttgtccccaatgaacaccgggacgtccctcgt 790 Query: 465 ggagatg 471 ||||||| Sbjct: 789 ggagatg 783 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 8 tttgactttattacgcacacattcaagtcaggatg 42 |||||||||||||||||||||||||||| |||||| Sbjct: 1289 tttgactttattacgcacacattcaagtaaggatg 1255
>gb|BT018164.1| Zea mays clone EL01N0556E06.c mRNA sequence Length = 979 Score = 83.8 bits (42), Expect = 5e-13 Identities = 204/258 (79%) Strand = Plus / Minus Query: 214 cgcagctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctcagc 273 |||||||||||||| || || || | ||| |||||| ||||||| ||||| ||||| || Sbjct: 492 cgcagctcgtcgagcacgaagatcaccgtgacgccgtacatgttcccgtactcgctgagg 433 Query: 274 acccggcggctcgccgccagcttctccggctcgagctggagcaccgtgtcaatgcgatcc 333 || || | |||||||||||||||||| |||| ||||| |||| | | ||| | | ||| Sbjct: 432 acacgtctgctcgccgccagcttctcaggcttgagcttgagctcggcgtcgacctggtcc 373 Query: 334 agtatggcagacgagccggggtgcaccgcccagaagaggtcgttccatttcgcggcgatg 393 || || || |||||||| |||||||| ||||||| |||||||||||| ||| ||| | Sbjct: 372 aggatcgccgacgagcccgggtgcacgtcccagaacaggtcgttccatccggcgccgacg 313 Query: 394 ccgagcggctcaagcgagtcgtggaggcaccgctcgacgttgtccccgatgaacactggg 453 ||||||||| ||| | ||| ||| || |||||| || ||| ||||||| || ||| Sbjct: 312 ccgagcggcgcaaaagcgtccgtgagacagcgctcgctgtggtcgccgatgagtacgggg 253 Query: 454 acctgcctcgtggagatg 471 |||||||| ||||||||| Sbjct: 252 acctgcctggtggagatg 235 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caccatcgtctccacggtgagccc 143 |||||||||||| ||||||||||| Sbjct: 586 caccatcgtctcgacggtgagccc 563
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 214 cgcagctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctcagc 273 |||||||||||||| || || || |||| ||||| |||||||||||| ||||||||| Sbjct: 140532 cgcagctcgtcgaggacgaagatgatcgcggcgccgctcatgttgccgtactcgctcagc 140591 Query: 274 acccggcggctcgccgccagcttctccggctcgagctggag 314 ||||| |||||||||||||||||| | ||||| ||| |||| Sbjct: 140592 acccgccggctcgccgccagcttcccgggctccagccggag 140632 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagctg 311 |||||||||||| |||||||||||||| |||||||||||||||||| | ||||| ||| | Sbjct: 151543 catgttgccgtactcgctcagcacccgccggctcgccgccagcttcccgggctccagccg 151484 Query: 312 gag 314 ||| Sbjct: 151483 gag 151481 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||||||||||||| Sbjct: 121323 gccggggtgcaccgcccagaagaggtcgttcca 121355 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 120 caccatcgtctccacggtgagccccggcccga 151 |||||||||||| | ||||||||||||||||| Sbjct: 140417 caccatcgtctcaatggtgagccccggcccga 140448 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 211 cgccgcagctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctc 270 ||||||||||||||||| || || | | |||| | ||| |||||| ||| | |||| | Sbjct: 156750 cgccgcagctcgtcgagcacgaagaacaccgtcgccccggccatgttcccgaactcgccc 156809 Query: 271 agcacccggcggctcgccgccagcttc 297 ||||| |||||| |||||||||||||| Sbjct: 156810 agcacgcggcggttcgccgccagcttc 156836 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Plus Query: 111 ggcgtgcaacaccatcgtctccacggtgagccccggcccgaa 152 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 156656 ggcgcgcagcaccatcgtctcgacggtgacgcccggcccgaa 156697 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 gccggggtgcaccgcccagaa 368 ||||||||||||||||||||| Sbjct: 156887 gccggggtgcaccgcccagaa 156907 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||| |||||||||||||| |||||| Sbjct: 151443 gggtgcatcgcccagaagaggtggttcca 151415 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 atcgtctccacggtgagccccggcccga 151 |||||||| | ||||||||||||||||| Sbjct: 151686 atcgtctcaatggtgagccccggcccga 151659 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 217 agctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctcag 272 ||||||||||| || || ||||||| | |||| ||||||| ||||| |||||||| Sbjct: 121192 agctcgtcgaggacgaagataatcgacgcgccagacatgttcccgtactcgctcag 121247
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 214 cgcagctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctcagc 273 |||||||||||||| || || || |||| ||||| |||||||||||| ||||||||| Sbjct: 18561217 cgcagctcgtcgaggacgaagatgatcgcggcgccgctcatgttgccgtactcgctcagc 18561276 Query: 274 acccggcggctcgccgccagcttctccggctcgagctggag 314 ||||| |||||||||||||||||| | ||||| ||| |||| Sbjct: 18561277 acccgccggctcgccgccagcttcccgggctccagccggag 18561317 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagctg 311 |||||||||||| |||||||||||||| |||||||||||||||||| | ||||| ||| | Sbjct: 18572228 catgttgccgtactcgctcagcacccgccggctcgccgccagcttcccgggctccagccg 18572169 Query: 312 gag 314 ||| Sbjct: 18572168 gag 18572166 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||||||||||||| Sbjct: 18542008 gccggggtgcaccgcccagaagaggtcgttcca 18542040 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 120 caccatcgtctccacggtgagccccggcccga 151 |||||||||||| | ||||||||||||||||| Sbjct: 18561102 caccatcgtctcaatggtgagccccggcccga 18561133 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 211 cgccgcagctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctc 270 ||||||||||||||||| || || | | |||| | ||| |||||| ||| | |||| | Sbjct: 18577435 cgccgcagctcgtcgagcacgaagaacaccgtcgccccggccatgttcccgaactcgccc 18577494 Query: 271 agcacccggcggctcgccgccagcttc 297 ||||| |||||| |||||||||||||| Sbjct: 18577495 agcacgcggcggttcgccgccagcttc 18577521 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Plus Query: 111 ggcgtgcaacaccatcgtctccacggtgagccccggcccgaa 152 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 18577341 ggcgcgcagcaccatcgtctcgacggtgacgcccggcccgaa 18577382 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 gccggggtgcaccgcccagaa 368 ||||||||||||||||||||| Sbjct: 18577572 gccggggtgcaccgcccagaa 18577592 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||| |||||||||||||| |||||| Sbjct: 18572128 gggtgcatcgcccagaagaggtggttcca 18572100 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 atcgtctccacggtgagccccggcccga 151 |||||||| | ||||||||||||||||| Sbjct: 18572371 atcgtctcaatggtgagccccggcccga 18572344 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 217 agctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctcag 272 ||||||||||| || || ||||||| | |||| ||||||| ||||| |||||||| Sbjct: 18541877 agctcgtcgaggacgaagataatcgacgcgccagacatgttcccgtactcgctcag 18541932
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 214 cgcagctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctcagc 273 |||||||||||||| || || || |||| ||||| |||||||||||| ||||||||| Sbjct: 18720618 cgcagctcgtcgaggacgaagatgatcgcggcgccgctcatgttgccgtactcgctcagc 18720677 Query: 274 acccggcggctcgccgccagcttctccggctcgagctggag 314 ||||| |||||||||||||||||| | ||||| ||| |||| Sbjct: 18720678 acccgccggctcgccgccagcttcccgggctccagccggag 18720718 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagctg 311 |||||||||||| |||||||||||||| |||||||||||||||||| | ||||| ||| | Sbjct: 18731629 catgttgccgtactcgctcagcacccgccggctcgccgccagcttcccgggctccagccg 18731570 Query: 312 gag 314 ||| Sbjct: 18731569 gag 18731567 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||||||||||||| Sbjct: 18701409 gccggggtgcaccgcccagaagaggtcgttcca 18701441 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 120 caccatcgtctccacggtgagccccggcccga 151 |||||||||||| | ||||||||||||||||| Sbjct: 18720503 caccatcgtctcaatggtgagccccggcccga 18720534 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 211 cgccgcagctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctc 270 ||||||||||||||||| || || | | |||| | ||| |||||| ||| | |||| | Sbjct: 18736836 cgccgcagctcgtcgagcacgaagaacaccgtcgccccggccatgttcccgaactcgccc 18736895 Query: 271 agcacccggcggctcgccgccagcttc 297 ||||| |||||| |||||||||||||| Sbjct: 18736896 agcacgcggcggttcgccgccagcttc 18736922 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Plus Query: 111 ggcgtgcaacaccatcgtctccacggtgagccccggcccgaa 152 |||| ||| |||||||||||| ||||||| ||||||||||| Sbjct: 18736742 ggcgcgcagcaccatcgtctcgacggtgacgcccggcccgaa 18736783 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 gccggggtgcaccgcccagaa 368 ||||||||||||||||||||| Sbjct: 18736973 gccggggtgcaccgcccagaa 18736993 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||| |||||||||||||| |||||| Sbjct: 18731529 gggtgcatcgcccagaagaggtggttcca 18731501 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 atcgtctccacggtgagccccggcccga 151 |||||||| | ||||||||||||||||| Sbjct: 18731772 atcgtctcaatggtgagccccggcccga 18731745 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 217 agctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctcag 272 ||||||||||| || || ||||||| | |||| ||||||| ||||| |||||||| Sbjct: 18701278 agctcgtcgaggacgaagataatcgacgcgccagacatgttcccgtactcgctcag 18701333
>ref|XM_477391.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1595 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcacccggcggctcgccgccagctt 296 ||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 1138 acatgttcccgtagtcgctgagcacacggcggctcgccgccagctt 1093 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 416 ggaggcaccgctcgacgttgtccccgatgaacactgggacctgcc 460 |||||||||||||||||||||||||||||| | | |||||||||| Sbjct: 964 ggaggcaccgctcgacgttgtccccgatgagccccgggacctgcc 920 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 343 gacgagccggggtgcaccgcccagaagaggtcgttcca 380 |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1046 gacgagcccgggtgcaccgcccagaacaggtcgttcca 1009 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Minus Query: 109 gtggcgtgcaacaccatcgtctccacggtgagccccggcccgaaggtcatcatcacaccc 168 ||||||||||||| ||||| || ||||| | |||||| ||||| | ||||||||| ||| Sbjct: 1280 gtggcgtgcaacagcatcgcatcaacggtcatccccgggccgaacgccatcatcactccc 1221 Query: 169 cactccggc 177 |||||||| Sbjct: 1220 aactccggc 1212
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcacccggcggctcgccgccagctt 296 ||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 10052433 acatgttcccgtagtcgctgagcacacggcggctcgccgccagctt 10052388 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 416 ggaggcaccgctcgacgttgtccccgatgaacactgggacctgcc 460 |||||||||||||||||||||||||||||| | | |||||||||| Sbjct: 10052259 ggaggcaccgctcgacgttgtccccgatgagccccgggacctgcc 10052215 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 343 gacgagccggggtgcaccgcccagaagaggtcgttcca 380 |||||||| ||||||||||||||||| ||||||||||| Sbjct: 10052341 gacgagcccgggtgcaccgcccagaacaggtcgttcca 10052304 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||||||||| Sbjct: 20451704 gggtgcaccgcccagaagaggtcgttcca 20451732 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||||||||| Sbjct: 20402195 gggtgcaccgcccagaagaggtcgttcca 20402223 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 246 gccgaacatgttgccgtagtcgctcagcacccggcggctcgccgccagcttctccggctc 305 ||||| |||||||||||| || || || |||| ||| |||||||||||||| |||||| Sbjct: 20402089 gccgagcatgttgccgtactcccttagaaccctccgggtcgccgccagcttccccggctt 20402148 Query: 306 gagctggag 314 |||||||| Sbjct: 20402149 tagctggag 20402157 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgcca 292 |||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 18820713 catgttgccgtactcgcgcagcacctgccggctcgccgcca 18820753 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgcca 292 |||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 18799052 catgttgccgtactcgcgcagcacctgccggctcgccgcca 18799092 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Minus Query: 109 gtggcgtgcaacaccatcgtctccacggtgagccccggcccgaaggtcatcatcacaccc 168 ||||||||||||| ||||| || ||||| | |||||| ||||| | ||||||||| ||| Sbjct: 10052575 gtggcgtgcaacagcatcgcatcaacggtcatccccgggccgaacgccatcatcactccc 10052516 Query: 169 cactccggc 177 |||||||| Sbjct: 10052515 aactccggc 10052507 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Plus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagctg 311 |||||||||||| || || |||||| |||||||||||||||||| | ||||| ||| | Sbjct: 20366721 catgttgccgtactcccttagcaccttccggctcgccgccagcttcccgggctccagccg 20366780 Query: 312 gag 314 ||| Sbjct: 20366781 gag 20366783 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 gccggggtgcaccgcccagaa 368 ||||||||||||||||||||| Sbjct: 12831443 gccggggtgcaccgcccagaa 12831463
>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01 Length = 130152 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcacccggcggctcgccgccagctt 296 ||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 25109 acatgttcccgtagtcgctgagcacacggcggctcgccgccagctt 25064 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 416 ggaggcaccgctcgacgttgtccccgatgaacactgggacctgcc 460 |||||||||||||||||||||||||||||| | | |||||||||| Sbjct: 24935 ggaggcaccgctcgacgttgtccccgatgagccccgggacctgcc 24891 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 343 gacgagccggggtgcaccgcccagaagaggtcgttcca 380 |||||||| ||||||||||||||||| ||||||||||| Sbjct: 25017 gacgagcccgggtgcaccgcccagaacaggtcgttcca 24980 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Minus Query: 109 gtggcgtgcaacaccatcgtctccacggtgagccccggcccgaaggtcatcatcacaccc 168 ||||||||||||| ||||| || ||||| | |||||| ||||| | ||||||||| ||| Sbjct: 25251 gtggcgtgcaacagcatcgcatcaacggtcatccccgggccgaacgccatcatcactccc 25192 Query: 169 cactccggc 177 |||||||| Sbjct: 25191 aactccggc 25183
>dbj|AK109558.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-E09, full insert sequence Length = 1595 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcacccggcggctcgccgccagctt 296 ||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 1138 acatgttcccgtagtcgctgagcacacggcggctcgccgccagctt 1093 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 416 ggaggcaccgctcgacgttgtccccgatgaacactgggacctgcc 460 |||||||||||||||||||||||||||||| | | |||||||||| Sbjct: 964 ggaggcaccgctcgacgttgtccccgatgagccccgggacctgcc 920 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 343 gacgagccggggtgcaccgcccagaagaggtcgttcca 380 |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1046 gacgagcccgggtgcaccgcccagaacaggtcgttcca 1009 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Minus Query: 109 gtggcgtgcaacaccatcgtctccacggtgagccccggcccgaaggtcatcatcacaccc 168 ||||||||||||| ||||| || ||||| | |||||| ||||| | ||||||||| ||| Sbjct: 1280 gtggcgtgcaacagcatcgcatcaacggtcatccccgggccgaacgccatcatcactccc 1221 Query: 169 cactccggc 177 |||||||| Sbjct: 1220 aactccggc 1212
>dbj|AP003797.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1001_C01 Length = 90750 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcacccggcggctcgccgccagctt 296 ||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 84082 acatgttcccgtagtcgctgagcacacggcggctcgccgccagctt 84037 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 416 ggaggcaccgctcgacgttgtccccgatgaacactgggacctgcc 460 |||||||||||||||||||||||||||||| | | |||||||||| Sbjct: 83908 ggaggcaccgctcgacgttgtccccgatgagccccgggacctgcc 83864 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 343 gacgagccggggtgcaccgcccagaagaggtcgttcca 380 |||||||| ||||||||||||||||| ||||||||||| Sbjct: 83990 gacgagcccgggtgcaccgcccagaacaggtcgttcca 83953 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Minus Query: 109 gtggcgtgcaacaccatcgtctccacggtgagccccggcccgaaggtcatcatcacaccc 168 ||||||||||||| ||||| || ||||| | |||||| ||||| | ||||||||| ||| Sbjct: 84224 gtggcgtgcaacagcatcgcatcaacggtcatccccgggccgaacgccatcatcactccc 84165 Query: 169 cactccggc 177 |||||||| Sbjct: 84164 aactccggc 84156
>ref|NM_195048.1| Oryza sativa (japonica cultivar-group) putative Chalcone synthase 1B (OSJNBb0081F12.9), mRNA Length = 885 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 349 ccggggtgcaccgcccagaagaggtcgttccattt 383 |||||||| |||||||||||||||||||||||||| Sbjct: 650 ccggggtgtaccgcccagaagaggtcgttccattt 616
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 349 ccggggtgcaccgcccagaagaggtcgttccattt 383 |||||||| |||||||||||||||||||||||||| Sbjct: 144255 ccggggtgtaccgcccagaagaggtcgttccattt 144221 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 |||||||||||| |||||||||||||||||||| Sbjct: 119776 gccggggtgcactgcccagaagaggtcgttcca 119744 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 |||||||||||||||||||||||| | |||||| Sbjct: 100862 gccggggtgcaccgcccagaagagattgttcca 100830
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 349 ccggggtgcaccgcccagaagaggtcgttccattt 383 |||||||| |||||||||||||||||||||||||| Sbjct: 38322 ccggggtgtaccgcccagaagaggtcgttccattt 38288 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 |||||||||||| |||||||||||||||||||| Sbjct: 13843 gccggggtgcactgcccagaagaggtcgttcca 13811
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 349 ccggggtgcaccgcccagaagaggtcgttccattt 383 |||||||| |||||||||||||||||||||||||| Sbjct: 4376714 ccggggtgtaccgcccagaagaggtcgttccattt 4376680 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 259 ccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagctggagc 315 ||||| ||||||||||| ||||||||||||| |||||| | ||||| ||||||||| Sbjct: 4985665 ccgtactcgctcagcacgtggcggctcgccgcaagcttccctggctctagctggagc 4985721 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 |||||||||||| |||||||||||||||||||| Sbjct: 4352235 gccggggtgcactgcccagaagaggtcgttcca 4352203 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||| ||||| Sbjct: 4985758 gggtgcaccgcccagaagaggtcattcca 4985786 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 |||||||||||||||||||||||| | |||||| Sbjct: 4333321 gccggggtgcaccgcccagaagagattgttcca 4333289 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||| |||||||||||||||||||| Sbjct: 3677512 gggtgcactgcccagaagaggtcgttcca 3677484
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 349 ccggggtgcaccgcccagaagaggtcgttccattt 383 |||||||| |||||||||||||||||||||||||| Sbjct: 4377535 ccggggtgtaccgcccagaagaggtcgttccattt 4377501 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 259 ccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagctggagc 315 ||||| ||||||||||| ||||||||||||| |||||| | ||||| ||||||||| Sbjct: 4986452 ccgtactcgctcagcacgtggcggctcgccgcaagcttccctggctctagctggagc 4986508 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 |||||||||||| |||||||||||||||||||| Sbjct: 4353056 gccggggtgcactgcccagaagaggtcgttcca 4353024 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||| ||||| Sbjct: 4986545 gggtgcaccgcccagaagaggtcattcca 4986573 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 |||||||||||||||||||||||| | |||||| Sbjct: 4334142 gccggggtgcaccgcccagaagagattgttcca 4334110 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||| |||||||||||||||||||| Sbjct: 3677433 gggtgcactgcccagaagaggtcgttcca 3677405
>ref|NM_195148.1| Oryza sativa (japonica cultivar-group) putative chalcone synthase (OSJNBa0051J07.20), mRNA Length = 1092 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 259 ccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagctggagc 315 ||||| ||||||||||| ||||||||||||| |||||| | ||||| ||||||||| Sbjct: 920 ccgtactcgctcagcacgtggcggctcgccgcaagcttccctggctctagctggagc 864 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||| ||||| Sbjct: 827 gggtgcaccgcccagaagaggtcattcca 799
>ref|NM_195043.1| Oryza sativa (japonica cultivar-group) putative chalcone synthase (OSJNBb0081F12.5), mRNA Length = 1032 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 |||||||||||| |||||||||||||||||||| Sbjct: 765 gccggggtgcactgcccagaagaggtcgttcca 733
>ref|XM_478473.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1200 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||||||||| Sbjct: 941 gggtgcaccgcccagaagaggtcgttcca 913
>gb|AY232492.1| Anthurium andraeanum putative chalcone synthase (CHS1) mRNA, complete cds Length = 1514 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagct 310 ||||||||||||| ||||||||||||| ||| | ||| |||||||||||| || |||| Sbjct: 1111 acatgttgccgtactcgctcagcaccctccgggtggcccccagcttctccgactggagcc 1052 Query: 311 ggagc 315 ||||| Sbjct: 1051 ggagc 1047
>gb|DQ421809.1| Anthurium andraeanum chalcone synthase (CHS) gene, complete cds Length = 1700 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagct 310 ||||||||||||| ||||||||||||| ||| | ||| |||||||||||| || |||| Sbjct: 1542 acatgttgccgtactcgctcagcaccctccgggtggcccccagcttctccgactggagcc 1483 Query: 311 ggagc 315 ||||| Sbjct: 1482 ggagc 1478
>gb|AC098566.3| Oryza sativa chromosome 10 clone OSJNBa0051J07, complete sequence Length = 148301 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 259 ccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagctggagc 315 ||||| ||||||||||| ||||||||||||| |||||| | ||||| ||||||||| Sbjct: 132586 ccgtactcgctcagcacgtggcggctcgccgcaagcttccctggctctagctggagc 132642 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||| ||||| Sbjct: 132679 gggtgcaccgcccagaagaggtcattcca 132707
>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077J18 Length = 180944 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||||||||| Sbjct: 32814 gggtgcaccgcccagaagaggtcgttcca 32842
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0678G09 Length = 139220 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||||||||| Sbjct: 111095 gggtgcaccgcccagaagaggtcgttcca 111123 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 246 gccgaacatgttgccgtagtcgctcagcacccggcggctcgccgccagcttctccggctc 305 ||||| |||||||||||| || || || |||| ||| |||||||||||||| |||||| Sbjct: 110989 gccgagcatgttgccgtactcccttagaaccctccgggtcgccgccagcttccccggctt 111048 Query: 306 gagctggag 314 |||||||| Sbjct: 111049 tagctggag 111057 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Plus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgccagcttctccggctcgagctg 311 |||||||||||| || || |||||| |||||||||||||||||| | ||||| ||| | Sbjct: 75621 catgttgccgtactcccttagcaccttccggctcgccgccagcttcccgggctccagccg 75680 Query: 312 gag 314 ||| Sbjct: 75681 gag 75683
>ref|XM_476153.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||| ||||| Sbjct: 926 gggtgcaccgcccagaagaggtcattcca 898
>ref|NM_195038.1| Oryza sativa (japonica cultivar-group) putative chalcone synthase (OSJNAb0015J03.16), mRNA Length = 1200 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttcca 380 |||||||||||||||||||||||| | |||||| Sbjct: 933 gccggggtgcaccgcccagaagagattgttcca 901
>ref|NM_194948.1| Oryza sativa (japonica cultivar-group) putative chalcone synthase (OSJNBa0036D19.7), mRNA Length = 1197 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||| |||||||||||||||||||| Sbjct: 926 gggtgcactgcccagaagaggtcgttcca 898
>ref|XM_478252.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1726 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgcca 292 |||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 1224 catgttgccgtactcgcgcagcacctgccggctcgccgcca 1184
>gb|AC116600.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0036D19, complete sequence Length = 126686 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||| |||||||||||||||||||| Sbjct: 25994 gggtgcactgcccagaagaggtcgttcca 25966
>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15, complete sequence Length = 184316 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||| ||||| Sbjct: 16094 gggtgcaccgcccagaagaggtcattcca 16122 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||||||||| |||||||| ||||| Sbjct: 44319 gggtgcaccgcccaaaagaggtcattcca 44347 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||| |||||||||||||| ||||| Sbjct: 31716 gggtgcactgcccagaagaggtcattcca 31744
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11, complete sequence Length = 148753 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||| ||||| Sbjct: 122125 gggtgcaccgcccagaagaggtcattcca 122153 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||| |||||||||||||| ||||| Sbjct: 137747 gggtgcactgcccagaagaggtcattcca 137775
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||| |||||||||||||||||||| Sbjct: 110353 gggtgcactgcccagaagaggtcgttcca 110325
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 ||||||||||||||||||||||| ||||| Sbjct: 6891171 gggtgcaccgcccagaagaggtcattcca 6891199 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||||||||| |||||||| ||||| Sbjct: 6919396 gggtgcaccgcccaaaagaggtcattcca 6919424 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||| |||||||||||||| ||||| Sbjct: 6906793 gggtgcactgcccagaagaggtcattcca 6906821
>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0055I24 Length = 155872 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgcca 292 |||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 153001 catgttgccgtactcgcgcagcacctgccggctcgccgcca 153041 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgcca 292 |||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 131340 catgttgccgtactcgcgcagcacctgccggctcgccgcca 131380
>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_F06 Length = 104419 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgcca 292 |||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 20899 catgttgccgtactcgcgcagcacctgccggctcgccgcca 20939
>dbj|AK110924.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-D05, full insert sequence Length = 1726 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 252 catgttgccgtagtcgctcagcacccggcggctcgccgcca 292 |||||||||||| |||| ||||||| | ||||||||||||| Sbjct: 1224 catgttgccgtactcgcgcagcacctgccggctcgccgcca 1184
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 245 cgccgaacatgttgccgtagtcgctca 271 |||||||||||||||||| |||||||| Sbjct: 49858 cgccgaacatgttgccgtggtcgctca 49884
>gb|S67975.1| lig D=C alpha-dehydrogenase [Pseudomonas paucimobilis, Genomic, 1229 nt] Length = 1229 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 ccgccagcttctccggctcgagc 309 ||||||||||||||||||||||| Sbjct: 851 ccgccagcttctccggctcgagc 829
>dbj|AB099849.1| Streptomyces violaceoruber plasmid pSV1 dnaE gene for putative DNA polymerase III, alpha chain, partial cds Length = 1812 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 245 cgccgaacatgttgccgtagtcgctca 271 |||||||||||||||||| |||||||| Sbjct: 962 cgccgaacatgttgccgtggtcgctca 988
>dbj|D11473.1|PSELIG Sphingomonas paucimobilis gene for C alpha-dehydrogenase, beta-etherase, beta-etherase, complete cds Length = 3044 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 ccgccagcttctccggctcgagc 309 ||||||||||||||||||||||| Sbjct: 851 ccgccagcttctccggctcgagc 829
>dbj|D11341.1|PSELIGD Sphingomonas paucimobilis DNA for C alpha-dehydrogenase, complete cds Length = 1229 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 ccgccagcttctccggctcgagc 309 ||||||||||||||||||||||| Sbjct: 851 ccgccagcttctccggctcgagc 829
>gb|AC125205.4| Mus musculus BAC clone RP23-238I2 from 14, complete sequence Length = 205957 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 aatccagtgacaattcctcttc 85 |||||||||||||||||||||| Sbjct: 177526 aatccagtgacaattcctcttc 177547
>gb|AY131328.1| Mazus pumilus chalcone synthase (CHS) mRNA, complete cds Length = 1179 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 115 tgcaacaccatcgtctccacggtgagccccggcccgaa 152 |||| ||||| |||||||||||| || ||||||||||| Sbjct: 1157 tgcagcaccaccgtctccacggtcaggcccggcccgaa 1120
>gb|AC140230.3| Mus musculus BAC clone RP24-493E4 from 14, complete sequence Length = 154085 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 aatccagtgacaattcctcttc 85 |||||||||||||||||||||| Sbjct: 112019 aatccagtgacaattcctcttc 111998
>gb|AF035622.1|AF035622 Scutellaria baicalensis chalcone synthase (CHS-P) mRNA, complete cds Length = 1402 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcacc 276 ||||||| |||||||||||||||||| Sbjct: 1012 acatgttcccgtagtcgctcagcacc 987 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 121 accatcgtctccacggtgagccccggcccgaag 153 |||| |||||| |||||||| |||||||||||| Sbjct: 1148 accaccgtctcaacggtgaggcccggcccgaag 1116
>dbj|AB009351.1| Citrus sinensis mRNA for chalcone synthase, complete cds, clone CitCHS2 Length = 1412 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 127 gtctccacggtgagccccggcccgaa 152 ||||| |||||||||||||||||||| Sbjct: 1171 gtctcgacggtgagccccggcccgaa 1146
>ref|XM_476157.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||||||||| |||||||| ||||| Sbjct: 926 gggtgcaccgcccaaaagaggtcattcca 898
>ref|XM_476155.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1605 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 gggtgcaccgcccagaagaggtcgttcca 380 |||||||| |||||||||||||| ||||| Sbjct: 926 gggtgcactgcccagaagaggtcattcca 898
>ref|NM_187818.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1218 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaa 368 ||||||||||||||||||||| Sbjct: 942 gccggggtgcaccgcccagaa 922
>gb|AY321087.1| Pinus pinaster chalcone synthase (chs3) mRNA, complete cds Length = 1486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcac 275 ||||||| ||||||||||||||||| Sbjct: 1105 acatgtttccgtagtcgctcagcac 1081
>gb|AY168851.1| Pinus pinaster chalcone synthase (chs2) mRNA, complete cds Length = 1476 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 251 acatgttgccgtagtcgctcagcac 275 ||||||| ||||||||||||||||| Sbjct: 1095 acatgtttccgtagtcgctcagcac 1071
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 gccggggtgcaccgcccagaa 368 ||||||||||||||||||||| Sbjct: 89567 gccggggtgcaccgcccagaa 89587
>ref|XM_320253.2| Anopheles gambiae str. PEST ENSANGP00000016493 (ENSANGG00000014004), partial mRNA Length = 2232 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gtagtcgctcagcacccggcg 281 ||||||||||||||||||||| Sbjct: 225 gtagtcgctcagcacccggcg 205
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 tcgccgccagcttctccggct 304 ||||||||||||||||||||| Sbjct: 1839762 tcgccgccagcttctccggct 1839782
>dbj|AB002815.1| Perilla frutescens mRNA for chalcone synthase, complete cds Length = 1449 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 120 caccatcgtctccacggtgagccccggcccgaa 152 ||||| ||||||||| ||||| ||||||||||| Sbjct: 1167 caccaccgtctccaccgtgaggcccggcccgaa 1135
>gb|AY728834.1| Zea mays cultivar EP1 chalcone synthase C2-like (c2) gene, complete sequence Length = 3559 Score = 40.1 bits (20), Expect = 6.4 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 348 gccggggtgcaccgcccagaagaggtcgttccatttcgcggcgatgccgagcggct 403 |||||||||| || ||||||||| | |||||| | ||||| |||||||||||||| Sbjct: 3016 gccggggtgcgccacccagaagatggagttccagt-cgcggagatgccgagcggct 2962
>gb|BT009068.1| Triticum aestivum clone wfl1c.pk001.k16:fis, full insert mRNA sequence Length = 1540 Score = 40.1 bits (20), Expect = 6.4 Identities = 65/80 (81%) Strand = Plus / Minus Query: 218 gctcgtcgagaacaaatataatcgtcacgccgaacatgttgccgtagtcgctcagcaccc 277 |||||||||| || || || | |||| |||| | |||||||||||| || |||||||| Sbjct: 1178 gctcgtcgagcacgaagatcagcgtcgcgccaagcatgttgccgtactctctcagcacgg 1119 Query: 278 ggcggctcgccgccagcttc 297 ||||||||| |||||||| Sbjct: 1118 tccggctcgccaccagcttc 1099
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctccggctcgagctgga 313 |||||||||||||||||||| Sbjct: 125491 cttctccggctcgagctgga 125472
>ref|NM_061698.1| Caenorhabditis elegans C16C4.7 (C16C4.7) mRNA, complete cds Length = 1086 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aatccagtgacaattcctct 83 |||||||||||||||||||| Sbjct: 718 aatccagtgacaattcctct 737
>dbj|AB020746.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MOB24 Length = 79706 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aacaaattgaccacttaatc 67 |||||||||||||||||||| Sbjct: 71735 aacaaattgaccacttaatc 71716
>ref|NM_209123.1| Eremothecium gossypii ADL326Wp (ADL326W), mRNA Length = 780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cttctccggctcgagctgga 313 |||||||||||||||||||| Sbjct: 525 cttctccggctcgagctgga 506
>gb|AF016657.1| Caenorhabditis elegans cosmid C16C4, complete sequence Length = 38708 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aatccagtgacaattcctct 83 |||||||||||||||||||| Sbjct: 2323 aatccagtgacaattcctct 2342
>gb|AY107634.1| Zea mays PCO095241 mRNA sequence Length = 899 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatcatcacaccccactcc 174 |||||||||||||||||||| Sbjct: 816 tcatcatcacaccccactcc 797 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,815,031 Number of Sequences: 3902068 Number of extensions: 2815031 Number of successful extensions: 52822 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 52349 Number of HSP's gapped (non-prelim): 473 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
