ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart21a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB086416.1| Hordeum vulgare mRNA for O-methyltransferase, co... 139 6e-30
2gb|AF033539.1|AF033539 Lolium perenne caffeic acid O-methyltrans... 123 4e-25
3ref|XM_480185.1| Oryza sativa (japonica cultivar-group), mRNA 64 3e-07
4dbj|AK061859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
6gb|DQ288259.1| Oryza sativa (japonica cultivar-group) O-methyltr... 64 3e-07
7dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
8dbj|AB122056.1| Oryza sativa (japonica cultivar-group) COMT mRNA... 62 1e-06
9dbj|AK064768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
10gb|AF153825.1|AF153825 Festuca arundinacea comt1c caffeic acid O... 56 7e-05
11gb|AF153823.1|AF153823 Festuca arundinacea comt1a caffeic acid O... 48 0.018
12gb|AF033538.1|AF033538 Lolium perenne caffeic acid O-methyltrans... 48 0.018
13gb|AC079258.4| Homo sapiens BAC clone RP11-410J22 from 2, comple... 46 0.069
14gb|AC003105.3| Arabidopsis thaliana chromosome 2 clone F18A8 map... 44 0.27
15gb|AF153824.1|AF153824 Festuca arundinacea comt1b caffeic acid O... 44 0.27
16ref|NM_100628.1| Arabidopsis thaliana TRFL2 (TRF-LIKE 2); DNA bi... 42 1.1
17gb|AY519535.1| Arabidopsis thaliana MYB transcription factor (At... 42 1.1
18ref|XM_742823.1| Aspergillus fumigatus Af293 AMP-binding protein... 42 1.1
19emb|Z68317.1|CET01H3 Caenorhabditis elegans Cosmid T01H3, comple... 42 1.1
20emb|AL450333.13| Human DNA sequence from clone RP11-25O6 on chro... 42 1.1
21emb|BX037446.1|CNS09122 Single read from an extremity of a full-... 42 1.1
22gb|AC064802.4| Homo sapiens chromosome 8, clone RP11-267L5, comp... 42 1.1
23gb|AC138527.22| Medicago truncatula clone mth2-10a20, complete s... 42 1.1
24gb|AC092868.2| Homo sapiens chromosome 15 clone RP11-356M20 map ... 42 1.1
25gb|AC099022.1| Drosophila melanogaster, chromosome 2L, region 23... 42 1.1
26gb|AC091748.3| Homo sapiens chromosome 15 clone RP11-99L18 map 1... 42 1.1
27gb|AC008321.7| Drosophila melanogaster, chromosome 2L, region 23... 42 1.1
28gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana... 42 1.1
29gb|AE003580.3| Drosophila melanogaster chromosome 2L, section 11... 42 1.1
30emb|CR550305.7| Zebrafish DNA sequence from clone DKEY-205E15 in... 42 1.1
31dbj|AP005623.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.1
32gb|L09204.1|DROTRS7A Drosophila melanogaster transfer RNA (tRNA-... 42 1.1
33gb|AC116413.12| Mus musculus chromosome 8, clone RP24-84J11, com... 40 4.3
34gb|AC122536.4| Mus musculus BAC clone RP24-542K22 from chromosom... 40 4.3
35gb|AC124350.4| Mus musculus BAC clone RP24-466K21 from chromosom... 40 4.3
36gb|AC147430.9| Medicago truncatula clone mth2-71e6, complete seq... 40 4.3
37gb|AF003138.2| Caenorhabditis elegans cosmid F12B6, complete seq... 40 4.3
38emb|AL121871.8|HSB258O15 Human DNA sequence from clone RP13-258O... 40 4.3
39emb|CR628339.1| Legionella pneumophila str. Lens plasmid pLPL, c... 40 4.3
40gb|AC007268.5| Arabidopsis thaliana chromosome 2 clone T27D6 map... 40 4.3
41gb|L36901.1|YSCMTCG17 Saccharomyces cerevisiae mitochondrion DNA... 40 4.3
42ref|XM_693754.1| PREDICTED: Danio rerio similar to gamma filamin... 40 4.3
43gb|AC117427.3| Homo sapiens 3 BAC RP11-66I5 (Roswell Park Cancer... 40 4.3
44gb|AC010874.3|AC010874 Homo sapiens BAC clone RP11-118K2 from Y,... 40 4.3
45gb|AF538053.1|MBREV Monosiga brevicollis mitochondrion, complete... 40 4.3
46gb|AC007533.2|AC007533 Homo sapiens chromosome 16 clone RPCI-11_... 40 4.3
47gb|AF177262.1|AF177262 Bodo saltans clone BM572 mitochondrial mi... 40 4.3
48emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 i... 40 4.3
49gb|AY258061.1| Monochamus saltuarius MSLJ1 12S ribosomal RNA gen... 40 4.3
50gb|AY258060.1| Monochamus saltuarius MSL1 12S ribosomal RNA gene... 40 4.3
51emb|AL110500.1|CEY87G2A Caenorhabditis elegans YAC Y87G2A, compl... 40 4.3
52emb|BX470230.5| Zebrafish DNA sequence from clone CH211-284B12 i... 40 4.3
53dbj|AK113726.1| Ciona intestinalis cDNA, clone:cicl006j12, full ... 40 4.3
54gb|U58743.1| Caenorhabditis elegans cosmid F39F10, complete sequ... 40 4.3
55emb|AL954190.5| Zebrafish DNA sequence from clone DKEY-30O6 in l... 40 4.3
56emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chr... 40 4.3
57gb|AC066595.5| Homo sapiens chromosome 3 clone RP11-385A18 map 3... 40 4.3 
>dbj|AB086416.1| Hordeum vulgare mRNA for O-methyltransferase, complete cds
          Length = 1372

 Score =  139 bits (70), Expect = 6e-30
 Identities = 112/126 (88%)
 Strand = Plus / Minus

                                                                        
Query: 195  tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
            ||||||||||||||||||||||| ||||  ||  | |||||| ||||||||||||| |||
Sbjct: 1153 tacttggtgtactccattgcccagaagttcgcaaagatgtagctggccttgacgcctgta 1094

                                                                        
Query: 255  aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
            ||||| |||||| |||| |||||||||| |||||| |||| |||||||||||||||||||
Sbjct: 1093 aaccctgcagccttggctagcttctcgaagtccctgaggttcctttccttgccgccgggg 1034

                  
Query: 315  ctgtac 320
            ||||||
Sbjct: 1033 ctgtac 1028
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>gb|AF033539.1|AF033539 Lolium perenne caffeic acid O-methyltransferase (OMT2) mRNA, complete
            cds
          Length = 1436

 Score =  123 bits (62), Expect = 4e-25
 Identities = 110/126 (87%)
 Strand = Plus / Minus

                                                                        
Query: 195  tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
            ||||| ||||||||||| ||||| ||||||||| | |||||||||||| |||||| ||||
Sbjct: 1129 tacttagtgtactccatggcccagaagtcggcgaagatgtaggtggccgtgacgctggta 1070

                                                                        
Query: 255  aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
            || |||||  || ||||||||||||| ||||||||  ||||||| ||||||||||| |||
Sbjct: 1069 aagccggcgcccttggcgagcttctccaggtccctgtggtacctctccttgccgcccggg 1010

                  
Query: 315  ctgtac 320
            ||||||
Sbjct: 1009 ctgtac 1004
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>ref|XM_480185.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1425

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 98/120 (81%)
 Strand = Plus / Minus

                                                                        
Query: 195  tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
            ||||||||| |||| || |||||   || |||||| |||||||||||||||| |||||| 
Sbjct: 1188 tacttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtg 1129

                                                                        
Query: 255  aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
            || ||||| || | |||||||| |  ||  ||||||  |||||| |||||||||||||||
Sbjct: 1128 aatccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccgggg 1069
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>dbj|AK061859.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G09, full
           insert sequence
          Length = 1227

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 98/120 (81%)
 Strand = Plus / Minus

                                                                       
Query: 195 tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
           ||||||||| |||| || |||||   || |||||| |||||||||||||||| |||||| 
Sbjct: 986 tacttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtg 927

                                                                       
Query: 255 aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
           || ||||| || | |||||||| |  ||  ||||||  |||||| |||||||||||||||
Sbjct: 926 aatccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccgggg 867
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 98/120 (81%)
 Strand = Plus / Plus

                                                                           
Query: 195     tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
               ||||||||| |||| || |||||   || |||||| |||||||||||||||| |||||| 
Sbjct: 3331697 tacttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtg 3331756

                                                                           
Query: 255     aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
               || ||||| || | |||||||| |  ||  ||||||  |||||| |||||||||||||||
Sbjct: 3331757 aatccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccgggg 3331816
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>gb|DQ288259.1| Oryza sativa (japonica cultivar-group) O-methyltransferase (ROMT-9)
            mRNA, complete cds
          Length = 1190

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 98/120 (81%)
 Strand = Plus / Minus

                                                                        
Query: 195  tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
            ||||||||| |||| || |||||   || |||||| |||||||||||||||| |||||| 
Sbjct: 1120 tacttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtg 1061

                                                                        
Query: 255  aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
            || ||||| || | |||||||| |  ||  ||||||  |||||| |||||||||||||||
Sbjct: 1060 aatccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccgggg 1001
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>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0438H08
          Length = 148626

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 98/120 (81%)
 Strand = Plus / Plus

                                                                          
Query: 195    tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
              ||||||||| |||| || |||||   || |||||| |||||||||||||||| |||||| 
Sbjct: 109264 tacttggtgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaagccggtg 109323

                                                                          
Query: 255    aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
              || ||||| || | |||||||| |  ||  ||||||  |||||| |||||||||||||||
Sbjct: 109324 aatccggcggcgcgggcgagctccctgaactccctctcgtacctctccttgccgccgggg 109383
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>dbj|AB122056.1| Oryza sativa (japonica cultivar-group) COMT mRNA for caffeic acid
           o-methyl transferase, partial cds
          Length = 1067

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggcgtaaatgtaggtggccttgacgccggtaaacccggcagccctggcgagcttctcgag 283
           |||||| |||||||||||||||| |||||| || ||||| || | |||||||| |  || 
Sbjct: 777 ggcgtagatgtaggtggccttgaagccggtgaatccggcggcgcgggcgagctccctgaa 718

                                          
Query: 284 gtccctcaggtacctttccttgccgccgggg 314
            ||||||  |||||| |||||||||||||||
Sbjct: 717 ctccctctcgtacctctccttgccgccgggg 687
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>dbj|AK064768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A05, full
            insert sequence
          Length = 1425

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                        
Query: 224  ggcgtaaatgtaggtggccttgacgccggtaaacccggcagccctggcgagcttctcgag 283
            |||||| |||||||||||||||| |||||| || ||||| || | |||||||| |  || 
Sbjct: 1159 ggcgtagatgtaggtggccttgaagccggtgaatccggcggcgcgggcgagctccctgaa 1100

                                           
Query: 284  gtccctcaggtacctttccttgccgccgggg 314
             ||||||  |||||| |||||||||||||||
Sbjct: 1099 ctccctctcgtacctctccttgccgccgggg 1069
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>gb|AF153825.1|AF153825 Festuca arundinacea comt1c caffeic acid O-methyltransferase mRNA,
            complete cds
          Length = 1438

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 195  tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
            ||||||||| |||| || |||||   || |||||| ||||| |||| |||||||||||| 
Sbjct: 1143 tacttggtgaactcgatggcccacgcgttggcgtagatgtacgtggacttgacgccggtg 1084

                                                                        
Query: 255  aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
            || |||||  |||||||||||  |||||  |||||   |||||| ||| |||||||||||
Sbjct: 1083 aagccggctcccctggcgagcgcctcgaactccctttcgtacctctccctgccgccgggg 1024
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>gb|AF153823.1|AF153823 Festuca arundinacea comt1a caffeic acid O-methyltransferase mRNA,
            complete cds
          Length = 1446

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 195  tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
            ||||||||| |||| || |||||   || |||||| ||||| |||| |||||||||||| 
Sbjct: 1126 tacttggtgaactcgatggcccacgcgttggcgtagatgtacgtggacttgacgccggtg 1067

                                                                        
Query: 255  aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
            || |||||  ||||||||||   || ||  ||||||  |||||| ||| |||||||||||
Sbjct: 1066 aatccggctcccctggcgagagcctggaactccctctcgtacctctccctgccgccgggg 1007
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>gb|AF033538.1|AF033538 Lolium perenne caffeic acid O-methyltransferase (OMT1) mRNA, complete
            cds
          Length = 1455

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 195  tacttggtgtactccattgcccaaaagtcggcgtaaatgtaggtggccttgacgccggta 254
            ||||||||| |||| || |||||   || |||||| ||||| |||| |||||||||||| 
Sbjct: 1133 tacttggtgaactcgatggcccacgcgttggcgtagatgtacgtggacttgacgccggtg 1074

                                                                        
Query: 255  aacccggcagccctggcgagcttctcgaggtccctcaggtacctttccttgccgccgggg 314
            || |||||  ||||||||||   || ||  ||||||  |||||| ||| |||||||||||
Sbjct: 1073 aatccggctcccctggcgagagcctggaactccctctcgtacctctccctgccgccgggg 1014
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>gb|AC079258.4| Homo sapiens BAC clone RP11-410J22 from 2, complete sequence
          Length = 169408

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 156   caagaacacagcagcatgctata 178
             |||||||||||||||||||||||
Sbjct: 96328 caagaacacagcagcatgctata 96350
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>gb|AC003105.3| Arabidopsis thaliana chromosome 2 clone F18A8 map B68, complete
             sequence
          Length = 95167

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 123   tcgattaaaatttattaaaaat 144
             ||||||||||||||||||||||
Sbjct: 65647 tcgattaaaatttattaaaaat 65668
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>gb|AF153824.1|AF153824 Festuca arundinacea comt1b caffeic acid O-methyltransferase mRNA,
            complete cds
          Length = 1440

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                        
Query: 225  gcgtaaatgtaggtggccttgacgccggtaaacccggcagccctggcgagcttctcgagg 284
            ||||| ||||| |||| |||||||||||| ||||| ||  ||||||| ||   |||||  
Sbjct: 1122 gcgtagatgtacgtggacttgacgccggtgaacccagctcccctggccagggcctcgaac 1063

                                          
Query: 285  tccctcaggtacctttccttgccgccgggg 314
            ||||||  |||||| ||| |||||||||||
Sbjct: 1062 tccctctcgtacctctccctgccgccgggg 1033
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>ref|NM_100628.1| Arabidopsis thaliana TRFL2 (TRF-LIKE 2); DNA binding AT1G07540
            (TRFL2) mRNA, complete cds
          Length = 1869

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  agctgtgacctcgatacttgg 201
            |||||||||||||||||||||
Sbjct: 1149 agctgtgacctcgatacttgg 1169
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>gb|AY519535.1| Arabidopsis thaliana MYB transcription factor (At1g07540) mRNA,
            complete cds
          Length = 1893

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  agctgtgacctcgatacttgg 201
            |||||||||||||||||||||
Sbjct: 1155 agctgtgacctcgatacttgg 1175
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>ref|XM_742823.1| Aspergillus fumigatus Af293 AMP-binding protein (Afu5g04270) partial
            mRNA
          Length = 2127

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 268  tggcgagcttctcgaggtccctcag 292
            |||||| ||||||||||||||||||
Sbjct: 1930 tggcgatcttctcgaggtccctcag 1906
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>emb|Z68317.1|CET01H3 Caenorhabditis elegans Cosmid T01H3, complete sequence
          Length = 21870

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 123  tcgattaaaatttattaaaaa 143
            |||||||||||||||||||||
Sbjct: 2100 tcgattaaaatttattaaaaa 2080
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>emb|AL450333.13| Human DNA sequence from clone RP11-25O6 on chromosome 6, complete
             sequence
          Length = 156964

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 126   attaaaatttattaaaaattgagct 150
             |||||| ||||||||||||||||||
Sbjct: 90329 attaaattttattaaaaattgagct 90305
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>emb|BX037446.1|CNS09122 Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 3-PRIME end
          of clone FK0AAA9DF09 of strain 6-9 of Anopheles gambiae
          (African malaria mosquito)
          Length = 691

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 cttccttttattcgaacacaa 73
          |||||||||||||||||||||
Sbjct: 25 cttccttttattcgaacacaa 45
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>gb|AC064802.4| Homo sapiens chromosome 8, clone RP11-267L5, complete sequence
          Length = 181079

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 126    attaaaatttattaaaaattg 146
              |||||||||||||||||||||
Sbjct: 151552 attaaaatttattaaaaattg 151532
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>gb|AC138527.22| Medicago truncatula clone mth2-10a20, complete sequence
          Length = 115023

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 125    gattaaaatttattaaaaatt 145
              |||||||||||||||||||||
Sbjct: 105907 gattaaaatttattaaaaatt 105927
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>gb|AC092868.2| Homo sapiens chromosome 15 clone RP11-356M20 map 15q21.3, complete
             sequence
          Length = 157533

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   tttattaaaaattgagctggt 153
             |||||||||||||||||||||
Sbjct: 49676 tttattaaaaattgagctggt 49656
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>gb|AC099022.1| Drosophila melanogaster, chromosome 2L, region 23C-23D, BAC clone
             BACR48B06, complete sequence
          Length = 184554

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    cttgcttccttttattcgaacacaa 73
             |||||||||||||||||||| ||||
Sbjct: 29824 cttgcttccttttattcgaatacaa 29800
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>gb|AC091748.3| Homo sapiens chromosome 15 clone RP11-99L18 map 15q21.3, complete
             sequence
          Length = 150294

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   tttattaaaaattgagctggt 153
             |||||||||||||||||||||
Sbjct: 21355 tttattaaaaattgagctggt 21335
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>gb|AC008321.7| Drosophila melanogaster, chromosome 2L, region 23D-23F, BAC clone
             BACR11E09, complete sequence
          Length = 169931

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    cttgcttccttttattcgaacacaa 73
             |||||||||||||||||||| ||||
Sbjct: 88188 cttgcttccttttattcgaatacaa 88164
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>gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana BAC F22G5 from chromosome I,
             complete sequence
          Length = 104830

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   agctgtgacctcgatacttgg 201
             |||||||||||||||||||||
Sbjct: 24614 agctgtgacctcgatacttgg 24634
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>gb|AE003580.3| Drosophila melanogaster chromosome 2L, section 11 of 83 of the complete
             sequence
          Length = 286920

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 49    cttgcttccttttattcgaacacaa 73
             |||||||||||||||||||| ||||
Sbjct: 28588 cttgcttccttttattcgaatacaa 28612
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>emb|CR550305.7| Zebrafish DNA sequence from clone DKEY-205E15 in linkage group 11,
              complete sequence
          Length = 159061

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 125    gattaaaatttattaaaaatt 145
              |||||||||||||||||||||
Sbjct: 105867 gattaaaatttattaaaaatt 105887
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>dbj|AP005623.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1311A1, complete
              sequence
          Length = 187346

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 126    attaaaatttattaaaaattg 146
              |||||||||||||||||||||
Sbjct: 144482 attaaaatttattaaaaattg 144502
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>gb|L09204.1|DROTRS7A Drosophila melanogaster transfer RNA (tRNA-Ser7) gene
          Length = 3485

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 49  cttgcttccttttattcgaacacaa 73
           |||||||||||||||||||| ||||
Sbjct: 239 cttgcttccttttattcgaatacaa 215
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>gb|AC116413.12| Mus musculus chromosome 8, clone RP24-84J11, complete sequence
          Length = 210471

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   taaaatttattaaaaattga 147
             ||||||||||||||||||||
Sbjct: 77079 taaaatttattaaaaattga 77098
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>gb|AC122536.4| Mus musculus BAC clone RP24-542K22 from chromosome 17, complete
             sequence
          Length = 150022

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     caacatgaaaaatttcaaga 28
             ||||||||||||||||||||
Sbjct: 68823 caacatgaaaaatttcaaga 68804
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>gb|AC124350.4| Mus musculus BAC clone RP24-466K21 from chromosome 8, complete sequence
          Length = 160905

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    taaaatttattaaaaattga 147
              ||||||||||||||||||||
Sbjct: 160670 taaaatttattaaaaattga 160689
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>gb|AC147430.9| Medicago truncatula clone mth2-71e6, complete sequence
          Length = 125478

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    tgaaaaatttcaagatggag 33
             ||||||||||||||||||||
Sbjct: 60019 tgaaaaatttcaagatggag 60038
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>gb|AF003138.2| Caenorhabditis elegans cosmid F12B6, complete sequence
          Length = 29268

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   cgattaaaatttattaaaaattga 147
             |||||||||||| |||||||||||
Sbjct: 12108 cgattaaaattttttaaaaattga 12131
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>emb|AL121871.8|HSB258O15 Human DNA sequence from clone RP13-258O15 on chromosome X Contains a
              ribosomal protein L26 pseudogene, complete sequence
          Length = 183876

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    ttaaaatttattaaaaattg 146
              ||||||||||||||||||||
Sbjct: 102097 ttaaaatttattaaaaattg 102078
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>emb|CR628339.1| Legionella pneumophila str. Lens plasmid pLPL, complete sequence
          Length = 59832

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   aatttattaaaaattgagct 150
             ||||||||||||||||||||
Sbjct: 42133 aatttattaaaaattgagct 42114
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>gb|AC007268.5| Arabidopsis thaliana chromosome 2 clone T27D6 map PR1, complete
            sequence
          Length = 89685

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 54   ttccttttattcgaacacaaaata 77
            ||||||| ||||||||||||||||
Sbjct: 1413 ttcctttaattcgaacacaaaata 1390
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>gb|L36901.1|YSCMTCG17 Saccharomyces cerevisiae mitochondrion DNA segment
          Length = 1748

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 attaaaatttattaaaaatt 145
           ||||||||||||||||||||
Sbjct: 546 attaaaatttattaaaaatt 565
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>ref|XM_693754.1| PREDICTED: Danio rerio similar to gamma filamin (LOC570288), mRNA
          Length = 7913

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   caaaatacaaaatgaaacga 90
            ||||||||||||||||||||
Sbjct: 7345 caaaatacaaaatgaaacga 7326
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>gb|AC117427.3| Homo sapiens 3 BAC RP11-66I5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86087

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   attaaaatttattaaaaatt 145
             ||||||||||||||||||||
Sbjct: 78637 attaaaatttattaaaaatt 78618
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>gb|AC010874.3|AC010874 Homo sapiens BAC clone RP11-118K2 from Y, complete sequence
          Length = 114045

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   ttaaaatttattaaaaattg 146
             ||||||||||||||||||||
Sbjct: 73119 ttaaaatttattaaaaattg 73100
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>gb|AF538053.1|MBREV Monosiga brevicollis mitochondrion, complete genome
          Length = 76568

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   attaaaatttattaaaaatt 145
             ||||||||||||||||||||
Sbjct: 32317 attaaaatttattaaaaatt 32298
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>gb|AC007533.2|AC007533 Homo sapiens chromosome 16 clone RPCI-11_474B12, complete sequence
          Length = 153053

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   taaaatttattaaaaattga 147
             ||||||||||||||||||||
Sbjct: 80258 taaaatttattaaaaattga 80277
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>gb|AF177262.1|AF177262 Bodo saltans clone BM572 mitochondrial minicircle fragment
          Length = 402

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 attaaaatttattaaaaatt 145
           ||||||||||||||||||||
Sbjct: 253 attaaaatttattaaaaatt 234
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>emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 in linkage group 19,
             complete sequence
          Length = 182182

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    acacaaaatacaaaatgaaa 87
             ||||||||||||||||||||
Sbjct: 13106 acacaaaatacaaaatgaaa 13125
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>gb|AY258061.1| Monochamus saltuarius MSLJ1 12S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 344

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 attaaaatttattaaaaatt 145
           ||||||||||||||||||||
Sbjct: 323 attaaaatttattaaaaatt 304
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>gb|AY258060.1| Monochamus saltuarius MSL1 12S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 344

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 attaaaatttattaaaaatt 145
           ||||||||||||||||||||
Sbjct: 323 attaaaatttattaaaaatt 304
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>emb|AL110500.1|CEY87G2A Caenorhabditis elegans YAC Y87G2A, complete sequence
          Length = 123091

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   attaaaatttattaaaaatt 145
             ||||||||||||||||||||
Sbjct: 99163 attaaaatttattaaaaatt 99144
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>emb|BX470230.5| Zebrafish DNA sequence from clone CH211-284B12 in linkage group 4,
             complete sequence
          Length = 173564

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    caaaatacaaaatgaaacga 90
             ||||||||||||||||||||
Sbjct: 65724 caaaatacaaaatgaaacga 65705
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>dbj|AK113726.1| Ciona intestinalis cDNA, clone:cicl006j12, full insert sequence
          Length = 1703

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 74   aatacaaaatgaaacgattg 93
            ||||||||||||||||||||
Sbjct: 1599 aatacaaaatgaaacgattg 1580
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>gb|U58743.1| Caenorhabditis elegans cosmid F39F10, complete sequence
          Length = 25370

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 attaaaatttattaaaaatt 145
           ||||||||||||||||||||
Sbjct: 671 attaaaatttattaaaaatt 690
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>emb|AL954190.5| Zebrafish DNA sequence from clone DKEY-30O6 in linkage group 4,
             complete sequence
          Length = 144062

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    caaaatacaaaatgaaacga 90
             ||||||||||||||||||||
Sbjct: 28373 caaaatacaaaatgaaacga 28354
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>emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chromosome 4, complete
             sequence
          Length = 189040

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   agaacacagcagcatgctat 177
             ||||||||||||||||||||
Sbjct: 51136 agaacacagcagcatgctat 51155
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>gb|AC066595.5| Homo sapiens chromosome 3 clone RP11-385A18 map 3p, complete sequence
          Length = 172123

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    attaaaatttattaaaaatt 145
              ||||||||||||||||||||
Sbjct: 116696 attaaaatttattaaaaatt 116715


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,477,998
Number of Sequences: 3902068
Number of extensions: 4477998
Number of successful extensions: 95323
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95157
Number of HSP's gapped (non-prelim): 158
length of query: 324
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 302
effective length of database: 17,147,199,772
effective search space: 5178454331144
effective search space used: 5178454331144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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