Clone Name | rbart21a09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YCXN_PORPU (P51364) Hypothetical 26.5 kDa protein in ycf44-cpcG ... | 29 | 6.8 | 2 | DGKE_MOUSE (Q9R1C6) Diacylglycerol kinase epsilon (EC 2.7.1.107)... | 29 | 6.8 | 3 | DGKE_HUMAN (P52429) Diacylglycerol kinase epsilon (EC 2.7.1.107)... | 28 | 8.9 | 4 | Y826_METTH (O26914) Hypothetical UPF0004 protein MTH826 | 28 | 8.9 |
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>YCXN_PORPU (P51364) Hypothetical 26.5 kDa protein in ycf44-cpcG intergenic| region (ORF240) Length = 240 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/41 (46%), Positives = 23/41 (56%) Frame = -2 Query: 269 SLFCTTTTGPFVSYLWYPFQTSGQTVLDLQLEFDLFCSSCK 147 S F TT + PF++ LW PF SG T+L F LF S K Sbjct: 202 SRFLTTASSPFLNNLWAPF--SG-TILLSAGTFSLFSSILK 239
>DGKE_MOUSE (Q9R1C6) Diacylglycerol kinase epsilon (EC 2.7.1.107) (Diglyceride| kinase epsilon) (DGK-epsilon) (DAG kinase epsilon) Length = 564 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 8/77 (10%) Frame = -2 Query: 455 CTGRRVDTGAYSKAQGLHACRRVYL--------LPCHSSIRARSWLAPKCNTCMFLFCSV 300 C G RVD G K C+ + L +P H IR P C+ C+F Sbjct: 87 CCGLRVDEGCLKKVDKRFPCKEIMLKNDKAADAMP-HHWIRGN---VPLCSYCVFCRQQC 142 Query: 299 GHAEKTQVARSLFCTTT 249 G K R ++C T Sbjct: 143 GSQPKLCDYRCIWCQKT 159
>DGKE_HUMAN (P52429) Diacylglycerol kinase epsilon (EC 2.7.1.107) (Diglyceride| kinase epsilon) (DGK-epsilon) (DAG kinase epsilon) Length = 567 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 5/74 (6%) Frame = -2 Query: 455 CTGRRVDTGAYSKAQGLHACRRVYLLPCHSSIRA--RSWL---APKCNTCMFLFCSVGHA 291 C G RVD G KA C+ + L + A W+ P C+ CM G Sbjct: 89 CCGLRVDEGCLRKADKRFQCKEIMLKNDTKVLDAMPHHWIRGNVPLCSYCMVCKQQCGCQ 148 Query: 290 EKTQVARSLFCTTT 249 K R ++C T Sbjct: 149 PKLCDYRCIWCQKT 162
>Y826_METTH (O26914) Hypothetical UPF0004 protein MTH826| Length = 424 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -1 Query: 369 FVHTCSIVARTKM*YVHVSVLFGRARGENSSSTEPFLHDYNRAFRVL 229 F+ TCS++ K ++H+S R R +SS E + R R L Sbjct: 309 FMDTCSLLEEVKPSFIHLSKYRHRPRARSSSLDEIDFRELRRRSRAL 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,586,664 Number of Sequences: 219361 Number of extensions: 1477152 Number of successful extensions: 4041 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3915 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4039 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)