Clone Name | rbart21a09 |
---|---|
Clone Library Name | barley_pub |
>gb|AC111057.6| Mus musculus chromosome 15, clone RP24-572A2, complete sequence Length = 127727 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 tctgggttgtgagtcaaggac 91 ||||||||||||||||||||| Sbjct: 9125 tctgggttgtgagtcaaggac 9145
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence Length = 125424 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 tctgggttgtgagtcaaggac 91 ||||||||||||||||||||| Sbjct: 7316 tctgggttgtgagtcaaggac 7296
>dbj|AP005209.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-138E9, complete sequence Length = 161797 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 gccccagtatccacccttctc 447 ||||||||||||||||||||| Sbjct: 54920 gccccagtatccacccttctc 54900
>gb|AC151775.1| Ornithorhynchus anatinus chromosome UNK clone OABb-307A1, complete sequence Length = 195598 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cttgtgccttgctgtatgcc 429 |||||||||||||||||||| Sbjct: 83618 cttgtgccttgctgtatgcc 83599
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 agtatccacccttctccctg 451 |||||||||||||||||||| Sbjct: 143409 agtatccacccttctccctg 143390
>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01, complete sequence Length = 156691 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 agtatccacccttctccctg 451 |||||||||||||||||||| Sbjct: 66260 agtatccacccttctccctg 66241
>ref|XM_418162.1| PREDICTED: Gallus gallus similar to type I hair keratin KA31 (LOC420039), mRNA Length = 2583 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cagtccttgtgccttgctgt 424 |||||||||||||||||||| Sbjct: 1529 cagtccttgtgccttgctgt 1510
>emb|CR932807.1| Mus musculus chromosome 2, clone ResGen-172B22 strain 129/Sv, complete sequence Length = 138840 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 aggacagacttgcagctgggacaa 110 |||||||||||||||||| ||||| Sbjct: 81537 aggacagacttgcagctgagacaa 81514
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 agtatccacccttctccctg 451 |||||||||||||||||||| Sbjct: 8657837 agtatccacccttctccctg 8657818
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aacagaacagaaacatgcac 324 |||||||||||||||||||| Sbjct: 25756970 aacagaacagaaacatgcac 25756951
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aacagaacagaaacatgcac 324 |||||||||||||||||||| Sbjct: 59434 aacagaacagaaacatgcac 59415
>emb|AL928877.6| Mouse DNA sequence from clone RP23-52D18 on chromosome 2, complete sequence Length = 201120 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 aggacagacttgcagctgggacaa 110 |||||||||||||||||| ||||| Sbjct: 55712 aggacagacttgcagctgagacaa 55689 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,708,999 Number of Sequences: 3902068 Number of extensions: 3708999 Number of successful extensions: 58990 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58955 Number of HSP's gapped (non-prelim): 35 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)