ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart21a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009328.1| Triticum aestivum clone wlm24.pk0018.g9:fis, full... 377 e-101
2gb|BT009198.1| Triticum aestivum clone wle1n.pk0004.c11:fis, ful... 244 2e-61
3ref|XM_475682.1| Oryza sativa (japonica cultivar-group), predic... 224 2e-55
4dbj|AK072992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
5gb|AY109667.1| Zea mays CL644_1 mRNA sequence 172 7e-40
6gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 151 3e-33
7gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome... 151 3e-33
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
9ref|NM_191431.1| Oryza sativa (japonica cultivar-group), predic... 70 7e-09
10dbj|AK103491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
11dbj|AK060471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
12ref|NM_115087.1| Arabidopsis thaliana unknown protein AT3G52270 ... 44 0.43
13gb|AE010365.1| Methanopyrus kandleri AV19 section 64 of 157 of t... 44 0.43
14emb|CR354428.16| Zebrafish DNA sequence from clone DKEY-20D16 in... 44 0.43
15gb|AC156945.2| Pan troglodytes BAC clone CH251-464H12 from chrom... 44 0.43
16dbj|AB226203.1| Aspergillus oryzae cDNA, contig sequence: AoEST3062 42 1.7
17dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 42 1.7
18gb|AC096750.3| Homo sapiens BAC clone RP11-426F15 from 4, comple... 42 1.7
19gb|AC079899.16| Homo sapiens 4 BAC RP11-399C9 (Roswell Park Canc... 42 1.7
20gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complet... 42 1.7
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
22dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
23gb|AC107710.5| Mus musculus chromosome 19, clone RP23-269K10, co... 40 6.7
24ref|XM_479299.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
25gb|L14561.1|HUMCAATPX Homo sapiens plasma membrane calcium ATPas... 40 6.7
26gb|AY748349.1| Drosophila melanogaster uncoordinated (unc) mRNA,... 40 6.7
27gb|AC104631.2| Drosophila melanogaster clone BACR35D19, complete... 40 6.7
28ref|XM_415583.1| PREDICTED: Gallus gallus similar to Dual specif... 40 6.7
29gb|AE013212.1| Thermoanaerobacter tengcongensis MB4, section 239... 40 6.7
30gb|AC124459.5| Mus musculus BAC clone RP24-140E5 from chromosome... 40 6.7
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.7
32gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete... 40 6.7
33emb|AL354828.12| Human DNA sequence from clone RP11-274P12 on ch... 40 6.7
34ref|XM_784662.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.7
35gb|AC068641.18| Homo sapiens 12 BAC RP11-981P6 (Roswell Park Can... 40 6.7
36emb|BX255918.16| Zebrafish DNA sequence from clone CH211-239I2 i... 40 6.7
37gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.7
38gb|AY118608.1| Drosophila melanogaster LP08350 full insert cDNA 40 6.7
39ref|NM_134591.2| Drosophila melanogaster uncoordinated CG1501-RA... 40 6.7
40gb|AC160393.2| Mus musculus BAC clone RP23-136M3 from chromosome... 40 6.7
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
43dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.7
44gb|AC010629.8| Homo sapiens chromosome 5 clone CTD-2213L16, comp... 40 6.7
45emb|BX548173.6| Zebrafish DNA sequence from clone DKEY-47K16 in ... 40 6.7
46gb|AY178381.1| Trifolium repens microsatellite agr1100 sequence 40 6.7
47gb|AY178306.1| Trifolium repens microsatellite agr1019 sequence 40 6.7
48gb|AY178304.1| Trifolium repens microsatellite agr1017 sequence 40 6.7
49emb|AL590152.51| Zebrafish DNA sequence from clone RP71-5O12 in ... 40 6.7
50dbj|AB073156.1| Arabidopsis thaliana DNA, chromosome 4 centromer... 40 6.7
51dbj|AK122129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
52dbj|AK119728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
53dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
54gb|AE003569.4| Drosophila melanogaster chromosome X, section 70 ... 40 6.7
55gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone... 40 6.7
56emb|AL929535.6| Zebrafish DNA sequence from clone CH211-151O1, c... 40 6.7
57gb|AF009413.1|AF009413 Oryza sativa 10 kDa chaperonin mRNA, comp... 40 6.7
58dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosy... 40 6.7 
>gb|BT009328.1| Triticum aestivum clone wlm24.pk0018.g9:fis, full insert mRNA
           sequence
          Length = 642

 Score =  377 bits (190), Expect = e-101
 Identities = 229/242 (94%)
 Strand = Plus / Minus

                                                                       
Query: 209 atcatcttcacggagcgccggcggcatcctccgatgacttcttgtactcgggcttgagct 268
           ||||||||||||| || ||||| || ||||| || |||||||||||||||||||||||||
Sbjct: 242 atcatcttcacggggcaccggcagcgtcctcagacgacttcttgtactcgggcttgagct 183

                                                                       
Query: 269 catgtgtgccctggttcggccctcgcttgttgtacatacagaggtcgttcaatatctcct 328
           | || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 182 cgtgcgtgccctggtttggccctcgtttgttgtacatacagaggtcgttcaatatctcct 123

                                                                       
Query: 329 tgaggaattgctctggctggtcggtttcttgcactagagccttcagtgcccagttaggct 388
           |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 122 tgaggaattgctctggctggtcagtctcttgcactagagccttcagtgcccagttaggct 63

                                                                       
Query: 389 gcttttcgaaaagcttgaagataatgttttccagttcccggcgatccctacgtgttcttt 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 62  gcttttcgaaaagcttgaagataatgttttccagttcccggcgatccctacgtgtccttt 3

             
Query: 449 tg 450
           ||
Sbjct: 2   tg 1



 Score =  159 bits (80), Expect = 1e-35
 Identities = 123/136 (90%), Gaps = 1/136 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ttatcaatagtttcatttcccttctgtgacatgtgttgtatatgtatcatctttataccc 63
           |||||| ||| | |||||||  ||||||||||||||||||||||||||||||| ||||||
Sbjct: 449 ttatcagtagatccatttcctctctgtgacatgtgttgtatatgtatcatctt-ataccc 391

                                                                       
Query: 64  atacaattacaaccatgcctcttaataaaaagcaaacaaacgcagcccaggcatgatggg 123
           ||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||  ||
Sbjct: 390 atacaattacaacaatgcctcttaataaaaagcaagcaaatgcagcccaagcatgactgg 331

                           
Query: 124 aggcttcagatagaca 139
           |||||||| |||||||
Sbjct: 330 aggcttcacatagaca 315
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>gb|BT009198.1| Triticum aestivum clone wle1n.pk0004.c11:fis, full insert mRNA
           sequence
          Length = 526

 Score =  244 bits (123), Expect = 2e-61
 Identities = 159/171 (92%)
 Strand = Plus / Minus

                                                                       
Query: 209 atcatcttcacggagcgccggcggcatcctccgatgacttcttgtactcgggcttgagct 268
           ||||||||||||| || ||||| || ||||| || |||||||||||||||||||||||||
Sbjct: 177 atcatcttcacggggcaccggcagcgtcctcagacgacttcttgtactcgggcttgagct 118

                                                                       
Query: 269 catgtgtgccctggttcggccctcgcttgttgtacatacagaggtcgttcaatatctcct 328
           | || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 117 cgtgcgtgccctggtttggccctcgtttgttgtacatacagaggtcgttcaatatctcct 58

                                                              
Query: 329 tgaggaattgctctggctggtcggtttcttgcactagagccttcagtgccc 379
           |||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 57  tgaggaattgctctggctggtcagtctcttgcactagagccttcagtgccc 7



 Score =  159 bits (80), Expect = 1e-35
 Identities = 123/136 (90%), Gaps = 1/136 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ttatcaatagtttcatttcccttctgtgacatgtgttgtatatgtatcatctttataccc 63
           |||||| ||| | |||||||  ||||||||||||||||||||||||||||||| ||||||
Sbjct: 384 ttatcagtagatccatttcctctctgtgacatgtgttgtatatgtatcatctt-ataccc 326

                                                                       
Query: 64  atacaattacaaccatgcctcttaataaaaagcaaacaaacgcagcccaggcatgatggg 123
           ||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||  ||
Sbjct: 325 atacaattacaacaatgcctcttaataaaaagcaagcaaatgcagcccaagcatgactgg 266

                           
Query: 124 aggcttcagatagaca 139
           |||||||| |||||||
Sbjct: 265 aggcttcacatagaca 250
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>ref|XM_475682.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 780

 Score =  224 bits (113), Expect = 2e-55
 Identities = 212/245 (86%)
 Strand = Plus / Minus

                                                                       
Query: 247 ttcttgtactcgggcttgagctcatgtgtgccctggttcggccctcgcttgttgtacata 306
           ||||||||||| |||||||||||||| || |||||||| || ||||| |||||||| | |
Sbjct: 752 ttcttgtactcaggcttgagctcatgcgttccctggtttggtcctcgtttgttgtaaaaa 693

                                                                       
Query: 307 cagaggtcgttcaatatctccttgaggaattgctctggctggtcggtttcttgcactaga 366
           || || || ||||  |||||||| |||||||||||||||||||| ||||||||||| || 
Sbjct: 692 cacagatcattcagaatctccttcaggaattgctctggctggtcagtttcttgcaccagc 633

                                                                       
Query: 367 gccttcagtgcccagttaggctgcttttcgaaaagcttgaagataatgttttccagttcc 426
           ||||| |||||||| || |||||  |||| ||||||||||| ||||| ||||||||||||
Sbjct: 632 gcctttagtgcccaattgggctgtctttcaaaaagcttgaatataatattttccagttcc 573

                                                                       
Query: 427 cggcgatccctacgtgttcttttgacatcagatggtttggttggcgtcggcttcctcttc 486
           | ||||||||||||| |||||||  ||||||||||||||||||| ||  ||||| |||||
Sbjct: 572 ctgcgatccctacgtattctttttgcatcagatggtttggttggtgtttgcttcttcttc 513

                
Query: 487 tcctt 491
           |||||
Sbjct: 512 tcctt 508
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>dbj|AK072992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147N17, full
           insert sequence
          Length = 1290

 Score =  224 bits (113), Expect = 2e-55
 Identities = 212/245 (86%)
 Strand = Plus / Minus

                                                                       
Query: 247 ttcttgtactcgggcttgagctcatgtgtgccctggttcggccctcgcttgttgtacata 306
           ||||||||||| |||||||||||||| || |||||||| || ||||| |||||||| | |
Sbjct: 924 ttcttgtactcaggcttgagctcatgcgttccctggtttggtcctcgtttgttgtaaaaa 865

                                                                       
Query: 307 cagaggtcgttcaatatctccttgaggaattgctctggctggtcggtttcttgcactaga 366
           || || || ||||  |||||||| |||||||||||||||||||| ||||||||||| || 
Sbjct: 864 cacagatcattcagaatctccttcaggaattgctctggctggtcagtttcttgcaccagc 805

                                                                       
Query: 367 gccttcagtgcccagttaggctgcttttcgaaaagcttgaagataatgttttccagttcc 426
           ||||| |||||||| || |||||  |||| ||||||||||| ||||| ||||||||||||
Sbjct: 804 gcctttagtgcccaattgggctgtctttcaaaaagcttgaatataatattttccagttcc 745

                                                                       
Query: 427 cggcgatccctacgtgttcttttgacatcagatggtttggttggcgtcggcttcctcttc 486
           | ||||||||||||| |||||||  ||||||||||||||||||| ||  ||||| |||||
Sbjct: 744 ctgcgatccctacgtattctttttgcatcagatggtttggttggtgtttgcttcttcttc 685

                
Query: 487 tcctt 491
           |||||
Sbjct: 684 tcctt 680
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>gb|AY109667.1| Zea mays CL644_1 mRNA sequence
          Length = 858

 Score =  172 bits (87), Expect = 7e-40
 Identities = 184/218 (84%)
 Strand = Plus / Minus

                                                                       
Query: 247 ttcttgtactcgggcttgagctcatgtgtgccctggttcggccctcgcttgttgtacata 306
           ||||||||||| ||||| |||||||| || |||||||| || ||||| || || |||| |
Sbjct: 542 ttcttgtactctggcttaagctcatgagttccctggtttggtcctcgtttattatacaca 483

                                                                       
Query: 307 cagaggtcgttcaatatctccttgaggaattgctctggctggtcggtttcttgcactaga 366
           ||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| || 
Sbjct: 482 cagagatcgttcaatatctccttcagaaattgctctggctggtcagtttcttgcaccagc 423

                                                                       
Query: 367 gccttcagtgcccagttaggctgcttttcgaaaagcttgaagataatgttttccagttcc 426
           ||||| |||||||| || || ||| ||||     ||||||| |||||||||||||  |||
Sbjct: 422 gcctttagtgcccaattgggttgcctttcnnnnngcttgaatataatgttttccatctcc 363

                                                 
Query: 427 cggcgatccctacgtgttcttttgacatcagatggttt 464
              ||||||||||| |||||||||||||| ||||||||
Sbjct: 362 gtacgatccctacgagttcttttgacatcggatggttt 325
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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17,
              complete sequence
          Length = 139829

 Score =  151 bits (76), Expect = 3e-33
 Identities = 133/152 (87%)
 Strand = Plus / Plus

                                                                          
Query: 339    ctctggctggtcggtttcttgcactagagccttcagtgcccagttaggctgcttttcgaa 398
              |||||||||||| ||||||||||| || ||||| |||||||| || |||||  |||| ||
Sbjct: 129834 ctctggctggtcagtttcttgcaccagcgcctttagtgcccaattgggctgtctttcaaa 129893

                                                                          
Query: 399    aagcttgaagataatgttttccagttcccggcgatccctacgtgttcttttgacatcaga 458
              ||||||||| ||||| ||||||||||||| ||||||||||||| |||||||  |||||||
Sbjct: 129894 aagcttgaatataatattttccagttccctgcgatccctacgtattctttttgcatcaga 129953

                                              
Query: 459    tggtttggttggcgtcggcttcctcttctcct 490
              |||||||||||| ||  ||||| |||||||||
Sbjct: 129954 tggtttggttggtgtttgcttcttcttctcct 129985



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                          
Query: 247    ttcttgtactcgggcttgagctcatgtgtgccctggttcggccctcgcttgttgtacata 306
              ||||||||||| |||||||||||||| || |||||||| || ||||| |||||||| | |
Sbjct: 129592 ttcttgtactcaggcttgagctcatgcgttccctggtttggtcctcgtttgttgtaaaaa 129651

                                                
Query: 307    cagaggtcgttcaatatctccttgaggaattgct 340
              || || || ||||  |||||||| ||||||||||
Sbjct: 129652 cacagatcattcagaatctccttcaggaattgct 129685
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>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11,
            complete sequence
          Length = 162772

 Score =  151 bits (76), Expect = 3e-33
 Identities = 133/152 (87%)
 Strand = Plus / Plus

                                                                        
Query: 339  ctctggctggtcggtttcttgcactagagccttcagtgcccagttaggctgcttttcgaa 398
            |||||||||||| ||||||||||| || ||||| |||||||| || |||||  |||| ||
Sbjct: 3636 ctctggctggtcagtttcttgcaccagcgcctttagtgcccaattgggctgtctttcaaa 3695

                                                                        
Query: 399  aagcttgaagataatgttttccagttcccggcgatccctacgtgttcttttgacatcaga 458
            ||||||||| ||||| ||||||||||||| ||||||||||||| |||||||  |||||||
Sbjct: 3696 aagcttgaatataatattttccagttccctgcgatccctacgtattctttttgcatcaga 3755

                                            
Query: 459  tggtttggttggcgtcggcttcctcttctcct 490
            |||||||||||| ||  ||||| |||||||||
Sbjct: 3756 tggtttggttggtgtttgcttcttcttctcct 3787



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                        
Query: 247  ttcttgtactcgggcttgagctcatgtgtgccctggttcggccctcgcttgttgtacata 306
            ||||||||||| |||||||||||||| || |||||||| || ||||| |||||||| | |
Sbjct: 3394 ttcttgtactcaggcttgagctcatgcgttccctggtttggtcctcgtttgttgtaaaaa 3453

                                              
Query: 307  cagaggtcgttcaatatctccttgaggaattgct 340
            || || || ||||  |||||||| ||||||||||
Sbjct: 3454 cacagatcattcagaatctccttcaggaattgct 3487
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  151 bits (76), Expect = 3e-33
 Identities = 133/152 (87%)
 Strand = Plus / Plus

                                                                            
Query: 339      ctctggctggtcggtttcttgcactagagccttcagtgcccagttaggctgcttttcgaa 398
                |||||||||||| ||||||||||| || ||||| |||||||| || |||||  |||| ||
Sbjct: 25060981 ctctggctggtcagtttcttgcaccagcgcctttagtgcccaattgggctgtctttcaaa 25061040

                                                                            
Query: 399      aagcttgaagataatgttttccagttcccggcgatccctacgtgttcttttgacatcaga 458
                ||||||||| ||||| ||||||||||||| ||||||||||||| |||||||  |||||||
Sbjct: 25061041 aagcttgaatataatattttccagttccctgcgatccctacgtattctttttgcatcaga 25061100

                                                
Query: 459      tggtttggttggcgtcggcttcctcttctcct 490
                |||||||||||| ||  ||||| |||||||||
Sbjct: 25061101 tggtttggttggtgtttgcttcttcttctcct 25061132



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                            
Query: 247      ttcttgtactcgggcttgagctcatgtgtgccctggttcggccctcgcttgttgtacata 306
                ||||||||||| |||||||||||||| || |||||||| || ||||| |||||||| | |
Sbjct: 25060739 ttcttgtactcaggcttgagctcatgcgttccctggtttggtcctcgtttgttgtaaaaa 25060798

                                                  
Query: 307      cagaggtcgttcaatatctccttgaggaattgct 340
                || || || ||||  |||||||| ||||||||||
Sbjct: 25060799 cacagatcattcagaatctccttcaggaattgct 25060832
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>ref|NM_191431.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 786

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                       
Query: 295 ttgttgtacatacagaggtcgttcaatatctccttgaggaattgctctggctggtcggtt 354
           |||||||| | ||| || || |||||||||||||| | |||||||||||| || || |||
Sbjct: 704 ttgttgtagaaacacagatcattcaatatctccttcaagaattgctctggttgatcagtt 645

                                                                       
Query: 355 tcttgcactagagccttcagtgcccagttaggctgcttttcgaaaagcttgaagataatg 414
           |||||||  |||  ||| || | ||| || |||||| | || ||||||||||| |  || 
Sbjct: 644 tcttgcatgagattcttaagagaccaattcggctgcctctcaaaaagcttgaataagata 585

                                  
Query: 415 ttttccagttcccggcgatccct 437
           ||||||||||||| |||||||||
Sbjct: 584 ttttccagttccctgcgatccct 562
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>dbj|AK103491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130N17, full
           insert sequence
          Length = 1276

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                       
Query: 295 ttgttgtacatacagaggtcgttcaatatctccttgaggaattgctctggctggtcggtt 354
           |||||||| | ||| || || |||||||||||||| | |||||||||||| || || |||
Sbjct: 880 ttgttgtagaaacacagatcattcaatatctccttcaagaattgctctggttgatcagtt 821

                                                                       
Query: 355 tcttgcactagagccttcagtgcccagttaggctgcttttcgaaaagcttgaagataatg 414
           |||||||  |||  ||| || | ||| || |||||| | || ||||||||||| |  || 
Sbjct: 820 tcttgcatgagattcttaagagaccaattcggctgcctctcaaaaagcttgaataagata 761

                                  
Query: 415 ttttccagttcccggcgatccct 437
           ||||||||||||| |||||||||
Sbjct: 760 ttttccagttccctgcgatccct 738
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>dbj|AK060471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E06, full
           insert sequence
          Length = 1325

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                       
Query: 295 ttgttgtacatacagaggtcgttcaatatctccttgaggaattgctctggctggtcggtt 354
           |||||||| | ||| || || |||||||||||||| | |||||||||||| || || |||
Sbjct: 916 ttgttgtagaaacacagatcattcaatatctccttcaagaattgctctggttgatcagtt 857

                                                                       
Query: 355 tcttgcactagagccttcagtgcccagttaggctgcttttcgaaaagcttgaagataatg 414
           |||||||  |||  ||| || | ||| || |||||| | || ||||||||||| |  || 
Sbjct: 856 tcttgcatgagattcttaagagaccaattcggctgcctctcaaaaagcttgaataagata 797

                                  
Query: 415 ttttccagttcccggcgatccct 437
           ||||||||||||| |||||||||
Sbjct: 796 ttttccagttccctgcgatccct 774
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>ref|NM_115087.1| Arabidopsis thaliana unknown protein AT3G52270 mRNA, complete cds
          Length = 1095

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 331 aggaattgctctggctggtcggtttc 356
           |||||||||||||||||||| |||||
Sbjct: 995 aggaattgctctggctggtcagtttc 970
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>gb|AE010365.1| Methanopyrus kandleri AV19 section 64 of 157 of the complete genome
          Length = 12251

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 19   tttcccttctgtgacatgtgttgtat 44
            |||||| |||||||||||||||||||
Sbjct: 2915 tttcccatctgtgacatgtgttgtat 2940
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>emb|CR354428.16| Zebrafish DNA sequence from clone DKEY-20D16 in linkage group 6,
             complete sequence
          Length = 214395

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 88    ataaaaagcaaacaaacgcagc 109
             ||||||||||||||||||||||
Sbjct: 45640 ataaaaagcaaacaaacgcagc 45661
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>gb|AC156945.2| Pan troglodytes BAC clone CH251-464H12 from chromosome unknown,
             complete sequence
          Length = 184973

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 188   aacagcagtaggattacacaaa 209
             ||||||||||||||||||||||
Sbjct: 59849 aacagcagtaggattacacaaa 59828
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>dbj|AB226203.1| Aspergillus oryzae cDNA, contig sequence: AoEST3062
          Length = 1325

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 251 tgtactcgggcttgagctcat 271
           |||||||||||||||||||||
Sbjct: 916 tgtactcgggcttgagctcat 896
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 251    tgtactcgggcttgagctcat 271
              |||||||||||||||||||||
Sbjct: 703914 tgtactcgggcttgagctcat 703894
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>gb|AC096750.3| Homo sapiens BAC clone RP11-426F15 from 4, complete sequence
          Length = 159618

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 37     tgttgtatatgtatcatcttt 57
              |||||||||||||||||||||
Sbjct: 115913 tgttgtatatgtatcatcttt 115933
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>gb|AC079899.16| Homo sapiens 4 BAC RP11-399C9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166679

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    tgttgtatatgtatcatcttt 57
             |||||||||||||||||||||
Sbjct: 37996 tgttgtatatgtatcatcttt 38016
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>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence
          Length = 173840

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 383    taggctgcttttcgaaaagct 403
              |||||||||||||||||||||
Sbjct: 170036 taggctgcttttcgaaaagct 170016
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 397      aaaagcttgaagataatgttttccagttcccggcgatccct 437
                ||||||||||| |  || ||||||||||||| |||||||||
Sbjct: 32591981 aaaagcttgaataagatattttccagttccctgcgatccct 32592021
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>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0695H10
          Length = 136883

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 397   aaaagcttgaagataatgttttccagttcccggcgatccct 437
             ||||||||||| |  || ||||||||||||| |||||||||
Sbjct: 54776 aaaagcttgaataagatattttccagttccctgcgatccct 54816
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>gb|AC107710.5| Mus musculus chromosome 19, clone RP23-269K10, complete sequence
          Length = 188708

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    ttaataaaaagcaaacaaac 104
             ||||||||||||||||||||
Sbjct: 39776 ttaataaaaagcaaacaaac 39757
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>ref|XM_479299.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 297

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 gagcgccggcggcatcctcc 240
           ||||||||||||||||||||
Sbjct: 66  gagcgccggcggcatcctcc 85
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>gb|L14561.1|HUMCAATPX Homo sapiens plasma membrane calcium ATPase isoform 1 (ATP2B1) gene,
             alternative splice products, partial cds
          Length = 50450

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    ttaataaaaagcaaacaaac 104
             ||||||||||||||||||||
Sbjct: 31662 ttaataaaaagcaaacaaac 31643
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>gb|AY748349.1| Drosophila melanogaster uncoordinated (unc) mRNA, complete cds
          Length = 4471

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  gcggcatcctccgatgactt 248
            ||||||||||||||||||||
Sbjct: 3373 gcggcatcctccgatgactt 3354
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>gb|AC104631.2| Drosophila melanogaster clone BACR35D19, complete sequence
          Length = 166908

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   gcggcatcctccgatgactt 248
             ||||||||||||||||||||
Sbjct: 94552 gcggcatcctccgatgactt 94571
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>ref|XM_415583.1| PREDICTED: Gallus gallus similar to Dual specificity
            mitogen-activated protein kinase kinase 4 (MAP kinase
            kinase 4) (JNK activating kinase 1) (c-Jun N-terminal
            kinase kinase 1) (JNKK) (SAPK/ERK kinase 1) (SEK1)
            (LOC417312), mRNA
          Length = 2288

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   taataaaaagcaaacaaacg 105
            ||||||||||||||||||||
Sbjct: 1833 taataaaaagcaaacaaacg 1852
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>gb|AE013212.1| Thermoanaerobacter tengcongensis MB4, section 239 of 244 of the
            complete genome
          Length = 13761

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 444  tcttttgacatcagatggtt 463
            ||||||||||||||||||||
Sbjct: 2324 tcttttgacatcagatggtt 2305
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>gb|AC124459.5| Mus musculus BAC clone RP24-140E5 from chromosome 19, complete sequence
          Length = 170323

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    ttaataaaaagcaaacaaac 104
             ||||||||||||||||||||
Sbjct: 64452 ttaataaaaagcaaacaaac 64471
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 221      gagcgccggcggcatcctcc 240
                ||||||||||||||||||||
Sbjct: 14139370 gagcgccggcggcatcctcc 14139351
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>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence
          Length = 452156

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    gcgccggcggcatcctccga 242
              ||||||||||||||||||||
Sbjct: 205095 gcgccggcggcatcctccga 205114
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>emb|AL354828.12| Human DNA sequence from clone RP11-274P12 on chromosome 13 Contains a
             ferritin heavy polypeptide 1 (FTH1) pseudogene and a
             DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 39 (DDX39)
             (DDXL, MGC8471, MGC8203) pseudogene, complete sequence
          Length = 168114

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   aagataatgttttccagttc 425
             ||||||||||||||||||||
Sbjct: 17805 aagataatgttttccagttc 17786
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>ref|XM_784662.1| PREDICTED: Strongylocentrotus purpuratus similar to CG32333-PA,
            isoform A (LOC584813), mRNA
          Length = 3795

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  tcagttatacaacagcagta 197
            ||||||||||||||||||||
Sbjct: 3330 tcagttatacaacagcagta 3349
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>gb|AC068641.18| Homo sapiens 12 BAC RP11-981P6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 106525

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    ttaataaaaagcaaacaaac 104
             ||||||||||||||||||||
Sbjct: 90944 ttaataaaaagcaaacaaac 90925
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>emb|BX255918.16| Zebrafish DNA sequence from clone CH211-239I2 in linkage group 11,
              complete sequence
          Length = 189958

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    ggtttggttggcgtcggctt 479
              ||||||||||||||||||||
Sbjct: 120930 ggtttggttggcgtcggctt 120949
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>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0012F18, from chromosome 3, complete sequence
          Length = 122903

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gagcgccggcggcatcctcc 240
             ||||||||||||||||||||
Sbjct: 13661 gagcgccggcggcatcctcc 13642
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>gb|AY118608.1| Drosophila melanogaster LP08350 full insert cDNA
          Length = 3933

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  gcggcatcctccgatgactt 248
            ||||||||||||||||||||
Sbjct: 2835 gcggcatcctccgatgactt 2816
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>ref|NM_134591.2| Drosophila melanogaster uncoordinated CG1501-RA (unc), mRNA
          Length = 4454

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  gcggcatcctccgatgactt 248
            ||||||||||||||||||||
Sbjct: 3373 gcggcatcctccgatgactt 3354
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>gb|AC160393.2| Mus musculus BAC clone RP23-136M3 from chromosome 12, complete
            sequence
          Length = 215692

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  ttcagatagacagcttcatc 147
            ||||||||||||||||||||
Sbjct: 8257 ttcagatagacagcttcatc 8276
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 221      gagcgccggcggcatcctcc 240
                ||||||||||||||||||||
Sbjct: 26652462 gagcgccggcggcatcctcc 26652481
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 221      gagcgccggcggcatcctcc 240
                ||||||||||||||||||||
Sbjct: 14134345 gagcgccggcggcatcctcc 14134326
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 470    gcgtcggcttcctcttctcc 489
              ||||||||||||||||||||
Sbjct: 541961 gcgtcggcttcctcttctcc 541942
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>gb|AC010629.8| Homo sapiens chromosome 5 clone CTD-2213L16, complete sequence
          Length = 82882

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   cccagttaggctgcttttcg 396
             ||||||||||||||||||||
Sbjct: 69198 cccagttaggctgcttttcg 69179
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>emb|BX548173.6| Zebrafish DNA sequence from clone DKEY-47K16 in linkage group 21,
            complete sequence
          Length = 210873

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   ctcttaataaaaagcaaaca 101
            ||||||||||||||||||||
Sbjct: 4900 ctcttaataaaaagcaaaca 4881



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   ctcttaataaaaagcaaaca 101
            ||||||||||||||||||||
Sbjct: 1697 ctcttaataaaaagcaaaca 1678



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  ctcttaataaaaagcaaaca 101
           ||||||||||||||||||||
Sbjct: 91  ctcttaataaaaagcaaaca 72
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>gb|AY178381.1| Trifolium repens microsatellite agr1100 sequence
          Length = 484

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  aaaaagcaaacaaacgcagc 109
           ||||||||||||||||||||
Sbjct: 316 aaaaagcaaacaaacgcagc 335
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>gb|AY178306.1| Trifolium repens microsatellite agr1019 sequence
          Length = 490

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  aaaaagcaaacaaacgcagc 109
           ||||||||||||||||||||
Sbjct: 322 aaaaagcaaacaaacgcagc 341
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>gb|AY178304.1| Trifolium repens microsatellite agr1017 sequence
          Length = 632

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 90  aaaaagcaaacaaacgcagc 109
           ||||||||||||||||||||
Sbjct: 313 aaaaagcaaacaaacgcagc 294
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>emb|AL590152.51| Zebrafish DNA sequence from clone RP71-5O12 in linkage group 20, complete
              sequence
          Length = 150235

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ctcttaataaaaagcaaaca 101
              ||||||||||||||||||||
Sbjct: 149932 ctcttaataaaaagcaaaca 149913



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ctcttaataaaaagcaaaca 101
              ||||||||||||||||||||
Sbjct: 148326 ctcttaataaaaagcaaaca 148307
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>dbj|AB073156.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
             clone:F13F19
          Length = 97397

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   aggattacacaaatcatctt 216
             ||||||||||||||||||||
Sbjct: 69466 aggattacacaaatcatctt 69447
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>dbj|AK122129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132M21, full
           insert sequence
          Length = 574

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 gagcgccggcggcatcctcc 240
           ||||||||||||||||||||
Sbjct: 141 gagcgccggcggcatcctcc 160
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>dbj|AK119728.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-H07, full
           insert sequence
          Length = 572

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 gagcgccggcggcatcctcc 240
           ||||||||||||||||||||
Sbjct: 140 gagcgccggcggcatcctcc 159
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>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524G08
          Length = 146690

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   gagcgccggcggcatcctcc 240
             ||||||||||||||||||||
Sbjct: 70066 gagcgccggcggcatcctcc 70085
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>gb|AE003569.4| Drosophila melanogaster chromosome X, section 70 of 74 of the complete
              sequence
          Length = 283558

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    gcggcatcctccgatgactt 248
              ||||||||||||||||||||
Sbjct: 190784 gcggcatcctccgatgactt 190803
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>gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone rp23-327i21, complete
              sequence
          Length = 218889

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ttcagatagacagcttcatc 147
              ||||||||||||||||||||
Sbjct: 198043 ttcagatagacagcttcatc 198062
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>emb|AL929535.6| Zebrafish DNA sequence from clone CH211-151O1, complete sequence
          Length = 162436

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atgcctcttaataaaaagca 97
              ||||||||||||||||||||
Sbjct: 122035 atgcctcttaataaaaagca 122054
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>gb|AF009413.1|AF009413 Oryza sativa 10 kDa chaperonin mRNA, complete cds
          Length = 631

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 gagcgccggcggcatcctcc 240
           ||||||||||||||||||||
Sbjct: 155 gagcgccggcggcatcctcc 174
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>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster
          Length = 78210

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 470   gcgtcggcttcctcttctcc 489
             ||||||||||||||||||||
Sbjct: 22897 gcgtcggcttcctcttctcc 22916


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,871,270
Number of Sequences: 3902068
Number of extensions: 4871270
Number of successful extensions: 133489
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133171
Number of HSP's gapped (non-prelim): 311
length of query: 492
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 470
effective length of database: 17,147,199,772
effective search space: 8059183892840
effective search space used: 8059183892840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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