>ref|NM_185701.1| Oryza sativa (japonica cultivar-group), Ozsa8052 predicted mRNA
          Length = 1050

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 359 aaccctatgcaccaagcttttgaaaaacccattgctcaaaatctccat 406
           ||||||||||||| |||| || |||| |||||||||||  ||||||||
Sbjct: 849 aaccctatgcaccgagctcttaaaaatcccattgctcattatctccat 802

>ref|NM_185691.1| Oryza sativa (japonica cultivar-group), Ozsa8042 predicted mRNA
          Length = 1050

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 359 aaccctatgcaccaagcttttgaaaaacccattgctcaaaatctccat 406
           ||||||||||||| |||| || |||| |||||||||||  ||||||||
Sbjct: 849 aaccctatgcaccgagctcttaaaaatcccattgctcattatctccat 802

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 359     aaccctatgcaccaagcttttgaaaaacccattgctca 396
               ||||||||||||| |||| || |||| |||||||||||
Sbjct: 3902973 aaccctatgcaccgagctcttaaaaatcccattgctca 3902936



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 359     aaccctatgcaccaagcttttgaaaaacccattgctca 396
               ||||||||||||| |||| || |||| |||||||||||
Sbjct: 3891150 aaccctatgcaccgagctcttaaaaatcccattgctca 3891113



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 359     aaccctatgcaccaagcttttgaaaaacccattgctca 396
               ||||||||||||| |||| || |||| |||||||||||
Sbjct: 3853094 aaccctatgcaccgagctcttaaaaatcccattgctca 3853057

>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0035I03
          Length = 153749

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 359  aaccctatgcaccaagcttttgaaaaacccattgctca 396
            ||||||||||||| |||| || |||| |||||||||||
Sbjct: 8849 aaccctatgcaccgagctcttaaaaatcccattgctca 8812

>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0015E04
          Length = 152046

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 359    aaccctatgcaccaagcttttgaaaaacccattgctca 396
              ||||||||||||| |||| || |||| |||||||||||
Sbjct: 149104 aaccctatgcaccgagctcttaaaaatcccattgctca 149067



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 359    aaccctatgcaccaagcttttgaaaaacccattgctca 396
              ||||||||||||| |||| || |||| |||||||||||
Sbjct: 111048 aaccctatgcaccgagctcttaaaaatcccattgctca 111011

>gb|AC145935.3| Gallus gallus BAC clone CH261-42P15 from chromosome unknown, complete
             sequence
          Length = 194387

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 387   ccattgctcaaaatctccatta 408
             ||||||||||||||||||||||
Sbjct: 42770 ccattgctcaaaatctccatta 42749

>ref|NM_185693.1| Oryza sativa (japonica cultivar-group), Ozsa8044 predicted mRNA
          Length = 1059

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 343 tctccgcgttggtgacaaccctatgcaccaagcttttgaaaaacccattgctcaaaatct 402
           |||| ||||| || || ||||||||||||  ||| || || |||||||||||||  ||||
Sbjct: 865 tctcggcgttcgtcaccaccctatgcaccgggctctttaacaacccattgctcattatct 806

                
Query: 403 ccatt 407
           |||||
Sbjct: 805 ccatt 801

>ref|XM_476310.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 942

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 343 tctccgcgttggtgacaaccctatgcaccaagcttttgaaaaacccattgctcaaaatct 402
           |||| ||||| || || ||||||||||||  ||| || || |||||||||||||  ||||
Sbjct: 748 tctcggcgttcgtcaccaccctatgcaccgggctctttaacaacccattgctcattatct 689

                
Query: 403 ccatt 407
           |||||
Sbjct: 688 ccatt 684

>gb|AC133123.3| Homo sapiens 3 BAC RP11-441E2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 50    acaaaaatctgggaaataggtaaaa 74
             |||||||| ||||||||||||||||
Sbjct: 59281 acaaaaatttgggaaataggtaaaa 59305

>gb|AC140112.3| Homo sapiens BAC clone RP11-1278I4 from UL, complete sequence
          Length = 216658

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 50    acaaaaatctgggaaataggtaaaa 74
             |||||||| ||||||||||||||||
Sbjct: 33363 acaaaaatttgggaaataggtaaaa 33339

>emb|AL359181.28| Human DNA sequence from clone RP11-392N11 on chromosome 9 Contains the 3'
              end of the PHF2 gene for PHD finger protein 2 (GRC5,
              KIAA0662), complete sequence
          Length = 165415

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 50     acaaaaatctgggaaataggtaaaa 74
              |||||||| ||||||||||||||||
Sbjct: 137509 acaaaaatttgggaaataggtaaaa 137485

>gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, complete sequence
          Length = 191144

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 50    acaaaaatctgggaaataggtaaaa 74
             |||||||| ||||||||||||||||
Sbjct: 28926 acaaaaatttgggaaataggtaaaa 28950

>gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, complete sequence
          Length = 162914

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 50     acaaaaatctgggaaataggtaaaa 74
              |||||||| ||||||||||||||||
Sbjct: 110749 acaaaaatttgggaaataggtaaaa 110773

>gb|AC148939.8| Pan troglodytes BAC clone CH251-51M11 from chromosome 7, complete
             sequence
          Length = 183313

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 50    acaaaaatctgggaaataggtaaaa 74
             |||||||| ||||||||||||||||
Sbjct: 70525 acaaaaatttgggaaataggtaaaa 70549

>dbj|AK131448.1| Homo sapiens cDNA FLJ16592 fis, clone TESTI4001984
          Length = 3944

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 50   acaaaaatctgggaaataggtaaaa 74
            |||||||| ||||||||||||||||
Sbjct: 2648 acaaaaatttgggaaataggtaaaa 2672

>gb|AC114954.2| Homo sapiens chromosome 5 clone RP11-103A10, complete sequence
          Length = 157980

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 50     acaaaaatctgggaaataggtaaaa 74
              |||||||| ||||||||||||||||
Sbjct: 105144 acaaaaatttgggaaataggtaaaa 105120

>gb|AC046144.15| Homo sapiens 3 BAC RP11-628J14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188840

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 59     tgggaaataggtaaaaacata 79
              |||||||||||||||||||||
Sbjct: 143378 tgggaaataggtaaaaacata 143358

>gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chromosome 7, complete
              sequence
          Length = 237211

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 50     acaaaaatctgggaaataggtaaaa 74
              |||||||| ||||||||||||||||
Sbjct: 105323 acaaaaatttgggaaataggtaaaa 105299

>emb|BX546492.4| Human DNA sequence from clone RP11-441E2 on chromosome 22, complete
             sequence
          Length = 165333

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 50    acaaaaatctgggaaataggtaaaa 74
             |||||||| ||||||||||||||||
Sbjct: 59282 acaaaaatttgggaaataggtaaaa 59306

>dbj|AB016870.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15I22
          Length = 59648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   tacacacacaaaaatctggga 63
            |||||||||||||||||||||
Sbjct: 6042 tacacacacaaaaatctggga 6022

>gb|AC160127.2| Mus musculus BAC clone RP23-295O2 from chromosome 9, complete sequence
          Length = 205289

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    acattttacatgaggagtac 45
             ||||||||||||||||||||
Sbjct: 86957 acattttacatgaggagtac 86976

>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence
          Length = 210819

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    caaaaatctgggaaataggtaaaa 74
             ||||||||||||||| ||||||||
Sbjct: 28379 caaaaatctgggaaagaggtaaaa 28402

>gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, complete sequence
          Length = 217989

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    caaaaatctgggaaataggtaaaa 74
             ||||||||||||||| ||||||||
Sbjct: 10578 caaaaatctgggaaagaggtaaaa 10555

>ref|XM_662703.1| Cryptosporidium hominis TU502 ubiquitin specific protease 66
           (Chro.20366) partial mRNA
          Length = 1149

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 403 ccattatatctcctatgttt 422
           ||||||||||||||||||||
Sbjct: 951 ccattatatctcctatgttt 970

>emb|AL390783.12| Human DNA sequence from clone RP11-109I13 on chromosome 10 Contains part
              of the CACNB2 gene for calcium channel voltage-dependent
              beta 2 subunit and a novel gene, complete sequence
          Length = 177656

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 55     aatctgggaaataggtaaaaacataaac 82
              |||||||||||||||||  |||||||||
Sbjct: 108527 aatctgggaaataggtattaacataaac 108500

>gb|AF203743.1| Eonycteris spelaea 16S ribosomal RNA gene, complete sequence;
           mitochondrial gene for mitochondrial product
          Length = 1572

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 catgtagtcgttgagcttga 237
           ||||||||||||||||||||
Sbjct: 554 catgtagtcgttgagcttga 535

>emb|AL929495.21| Zebrafish DNA sequence from clone CH211-136M16 in linkage group 12,
             complete sequence
          Length = 157568

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 44    acacacacaaaaatctgggaaataggtaaaaa 75
             ||||||||||||| |||| ||||| |||||||
Sbjct: 23475 acacacacaaaaaactggaaaatacgtaaaaa 23444

>gb|AC007953.21| Homo sapiens 3 BAC RP11-2L8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152210

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 372    aagcttttgaaaaacccattgctc 395
              ||||||||||||||| ||||||||
Sbjct: 142629 aagcttttgaaaaacacattgctc 142652

>gb|AC103549.6| Homo sapiens 3 BAC RP11-795G18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165139

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 372   aagcttttgaaaaacccattgctc 395
             ||||||||||||||| ||||||||
Sbjct: 71998 aagcttttgaaaaacacattgctc 71975

>gb|AC098847.4| Homo sapiens chromosome 18, clone RP11-824M15, complete sequence
          Length = 206693

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    gaggagtacacacacaaaaa 56
             ||||||||||||||||||||
Sbjct: 77623 gaggagtacacacacaaaaa 77642

>ref|XM_626532.1| Cryptosporidium parvum Iowa II ubiquitin C-terminal hydrolase of
           the cysteine proteinase fold (cgd2_3450), partial mRNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 403 ccattatatctcctatgttt 422
           ||||||||||||||||||||
Sbjct: 957 ccattatatctcctatgttt 976

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 357      acaaccctatgcaccaagcttttgaaaaacccattgctca 396
                |||||||||||||||  |||| |||| | |||||||||||
Sbjct: 12789500 acaaccctatgcaccgggcttctgaacatcccattgctca 12789461

>gb|AC099790.3| Homo sapiens chromosome 1 clone RP11-397G23, complete sequence
          Length = 213942

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 32     tacatgaggagtacacacacaaaa 55
              ||||||| ||||||||||||||||
Sbjct: 175815 tacatgaagagtacacacacaaaa 175792

>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0086N11
          Length = 146185

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 357    acaaccctatgcaccaagcttttgaaaaacccattgctca 396
              |||||||||||||||  |||| |||| | |||||||||||
Sbjct: 137777 acaaccctatgcaccgggcttctgaacatcccattgctca 137738

>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0073A18
          Length = 176755

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 357  acaaccctatgcaccaagcttttgaaaaacccattgctca 396
            |||||||||||||||  |||| |||| | |||||||||||
Sbjct: 8982 acaaccctatgcaccgggcttctgaacatcccattgctca 8943

>dbj|AK111474.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-F04, full
           insert sequence
          Length = 1257

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 357 acaaccctatgcaccaagcttttgaaaaacccattgctca 396
           |||||||||||||||  |||| |||| | |||||||||||
Sbjct: 914 acaaccctatgcaccgggcttctgaacatcccattgctca 875

>emb|Y11658.1|ECVHL88 Equus caballus DNA for CA microsatellite, locus ECVHL88
          Length = 595

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  tacatgaggagtacacacac 51
           ||||||||||||||||||||
Sbjct: 317 tacatgaggagtacacacac 298

>emb|AL713979.6| Mouse DNA sequence from clone RP23-434O7 on chromosome X, complete
              sequence
          Length = 148507

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    agtgtcatggtatttttcca 219
              ||||||||||||||||||||
Sbjct: 139391 agtgtcatggtatttttcca 139410


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,214,617
Number of Sequences: 3902068
Number of extensions: 4214617
Number of successful extensions: 81664
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81559
Number of HSP's gapped (non-prelim): 105
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)