ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart21a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0... 289 4e-75
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 289 4e-75
3dbj|AK103256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 4e-75
4dbj|AK069197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 4e-75
5gb|BT016727.1| Zea mays clone Contig560 mRNA sequence 254 2e-64
6gb|AY108511.1| Zea mays PCO079010 mRNA sequence 254 2e-64
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 248 1e-62
8dbj|AK101464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
9dbj|AK063753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 248 1e-62
11emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb... 248 1e-62
12emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388... 248 1e-62
13gb|BT016687.1| Zea mays clone Contig520 mRNA sequence 238 1e-59
14dbj|AK104972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
15gb|AF124755.1|AF124755 Pinus banksiana pyruvate dehydrogenase E1... 60 7e-06
16gb|AY104779.1| Zea mays PCO116203 mRNA sequence 58 3e-05
17gb|AF051249.1|AF051249 Picea mariana pyruvate dehydrogenase E1 b... 54 4e-04
18gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP... 42 1.6
19gb|AC165346.4| Mus musculus BAC clone RP23-354N5 from chromosome... 42 1.6
20gb|AC124183.4| Mus musculus BAC clone RP23-213I18 from 13, compl... 42 1.6
21emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; se... 42 1.6
22dbj|AK132272.1| Mus musculus 18 days pregnant adult female place... 42 1.6
23emb|AJ223375.1|PUU223375 Puumala virus RNA, strain Puu/Mellansel... 42 1.6
24emb|AJ223374.1|PUU223374 Puumala virus RNA, strain Puu/Mellansel... 42 1.6
25gb|AF099099.1|AF099099 Trypanosoma cruzi TolT1 (tolT1), TolT2 (t... 42 1.6
26gb|AC002538.1|AC002538 Homo sapiens chromosome 17, clone 138g16,... 42 1.6
27emb|AL840624.14| Mouse DNA sequence from clone RP23-183D3 on chr... 42 1.6
28gb|AY548382.1| Alcaligenes faecalis strain WM2072 htx/ptx operon... 40 6.2
29gb|AC158537.2| Mus musculus BAC clone RP23-2H7 from chromosome 1... 40 6.2
30gb|AY728028.1| Cenibacterium arsenoxidans clone M36 FliG (fliG),... 40 6.2
31gb|AF061267.2| Pseudomonas stutzeri strain WM88 operon htx, comp... 40 6.2
32gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 6.2
33emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome 40 6.2
34gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosom... 40 6.2
35gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete... 40 6.2
36gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete se... 40 6.2
37emb|AL158012.14| Human DNA sequence from clone RP11-157A10 on ch... 40 6.2
38emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigrovi... 40 6.2
39emb|AL732457.1|SPBPB21E7 S.pombe chromosome II BAC pB21E7 40 6.2
40gb|AC112481.2| Homo sapiens 12 BAC RP11-20L19 (Roswell Park Canc... 40 6.2
41emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence 40 6.2
42dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.2
43emb|CT010474.12| Mouse DNA sequence from clone RP23-199B14 on ch... 40 6.2
44gb|AC172892.1| Mus musculus BAC clone RP23-269B2 from chromosome... 40 6.2
45gb|U09962.1|HSU09962 Human ferritin H (FTHP2) pseudogene, partia... 40 6.2 
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183327

 Score =  289 bits (146), Expect = 4e-75
 Identities = 209/230 (90%)
 Strand = Plus / Minus

                                                                         
Query: 225   tggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcctcc 284
             |||||||||||||| || ||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 88845 tggcatatttgctcaacggcagccacaatctgggcaggctgcacgacggtggcatcctcc 88786

                                                                         
Query: 285   aaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcgtcg 344
             | ||  || || ||||| |||||||||||||| || |||| |||||||||||| ||||| 
Sbjct: 88785 agaggcgcagcatacggcgtcggcacatcctgcgacgacaagcacatgatgggtgcgtca 88726

                                                                         
Query: 345   aggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgccagtg 404
             |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||
Sbjct: 88725 aggtagtcccagaagttgtcgatgatggccgatctcaagctggcgccgatcccgcccgtg 88666

                                                               
Query: 405   cgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
             |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 88665 cgcatgcactcctccacaatcagcacgcggtgggtcttcttgatagagtt 88616



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 115   aagcctataccacaatgaacacctcgctaca 145
             ||||||||||||||||| | |||||||||||
Sbjct: 88941 aagcctataccacaatggatacctcgctaca 88911
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  289 bits (146), Expect = 4e-75
 Identities = 209/230 (90%)
 Strand = Plus / Minus

                                                                            
Query: 225      tggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcctcc 284
                |||||||||||||| || ||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 24710156 tggcatatttgctcaacggcagccacaatctgggcaggctgcacgacggtggcatcctcc 24710097

                                                                            
Query: 285      aaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcgtcg 344
                | ||  || || ||||| |||||||||||||| || |||| |||||||||||| ||||| 
Sbjct: 24710096 agaggcgcagcatacggcgtcggcacatcctgcgacgacaagcacatgatgggtgcgtca 24710037

                                                                            
Query: 345      aggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgccagtg 404
                |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||
Sbjct: 24710036 aggtagtcccagaagttgtcgatgatggccgatctcaagctggcgccgatcccgcccgtg 24709977

                                                                  
Query: 405      cgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
                |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 24709976 cgcatgcactcctccacaatcagcacgcggtgggtcttcttgatagagtt 24709927



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 115      aagcctataccacaatgaacacctcgctaca 145
                ||||||||||||||||| | |||||||||||
Sbjct: 24710252 aagcctataccacaatggatacctcgctaca 24710222
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>dbj|AK103256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124A09, full
            insert sequence
          Length = 2662

 Score =  289 bits (146), Expect = 4e-75
 Identities = 209/230 (90%)
 Strand = Plus / Minus

                                                                        
Query: 225  tggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcctcc 284
            |||||||||||||| || ||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 2423 tggcatatttgctcaacggcagccacaatctgggcaggctgcacgacggtggcatcctcc 2364

                                                                        
Query: 285  aaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcgtcg 344
            | ||  || || ||||| |||||||||||||| || |||| |||||||||||| ||||| 
Sbjct: 2363 agaggcgcagcatacggcgtcggcacatcctgcgacgacaagcacatgatgggtgcgtca 2304

                                                                        
Query: 345  aggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgccagtg 404
            |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||
Sbjct: 2303 aggtagtcccagaagttgtcgatgatggccgatctcaagctggcgccgatcccgcccgtg 2244

                                                              
Query: 405  cgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
            |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2243 cgcatgcactcctccacaatcagcacgcggtgggtcttcttgatagagtt 2194



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 115  aagcctataccacaatgaacacctcgctaca 145
            ||||||||||||||||| | |||||||||||
Sbjct: 2519 aagcctataccacaatggatacctcgctaca 2489
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>dbj|AK069197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008A03, full
           insert sequence
          Length = 1178

 Score =  289 bits (146), Expect = 4e-75
 Identities = 209/230 (90%)
 Strand = Plus / Minus

                                                                       
Query: 225 tggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcctcc 284
           |||||||||||||| || ||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 963 tggcatatttgctcaacggcagccacaatctgggcaggctgcacgacggtggcatcctcc 904

                                                                       
Query: 285 aaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcgtcg 344
           | ||  || || ||||| |||||||||||||| || |||| |||||||||||| ||||| 
Sbjct: 903 agaggcgcagcatacggcgtcggcacatcctgcgacgacaagcacatgatgggtgcgtca 844

                                                                       
Query: 345 aggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgccagtg 404
           |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||
Sbjct: 843 aggtagtcccagaagttgtcgatgatggccgatctcaagctggcgccgatcccgcccgtg 784

                                                             
Query: 405 cgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
           |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 783 cgcatgcactcctccacaatcagcacgcggtgggtcttcttgatagagtt 734



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 115  aagcctataccacaatgaacacctcgctaca 145
            ||||||||||||||||| | |||||||||||
Sbjct: 1059 aagcctataccacaatggatacctcgctaca 1029
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>gb|BT016727.1| Zea mays clone Contig560 mRNA sequence
          Length = 1617

 Score =  254 bits (128), Expect = 2e-64
 Identities = 206/232 (88%)
 Strand = Plus / Minus

                                                                        
Query: 223  attggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcct 282
            ||||||| || |||||||| || || || ||||| || |||||||| || || || ||||
Sbjct: 1358 attggcagatctgctcgacggcggccacgatctgcgcgggctgcaccacggtggcgtcct 1299

                                                                        
Query: 283  ccaaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcgt 342
            |||  || |||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1298 ccagcgtcgcggcgtacggggtcggcacgtcctgcgacgacaggcacatgatgggggcgt 1239

                                                                        
Query: 343  cgaggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgccag 402
            | |||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| |
Sbjct: 1238 ccaggtagtcccagaagttgtcgatgatggccgaccgcaggctggcgccgatgccgcccg 1179

                                                                
Query: 403  tgcgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
            | ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 1178 tccgcatgcactcctccacgatcagcacgcggtgggtcttcttgatcgagtt 1127
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>gb|AY108511.1| Zea mays PCO079010 mRNA sequence
          Length = 1714

 Score =  254 bits (128), Expect = 2e-64
 Identities = 206/232 (88%)
 Strand = Plus / Minus

                                                                        
Query: 223  attggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcct 282
            ||||||| || |||||||| || || || ||||| || |||||||| || || || ||||
Sbjct: 1372 attggcagatctgctcgacggcggccacgatctgcgcgggctgcaccacggtggcgtcct 1313

                                                                        
Query: 283  ccaaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcgt 342
            |||  || |||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1312 ccagcgtcgcggcgtacggggtcggcacgtcctgcgacgacaggcacatgatgggggcgt 1253

                                                                        
Query: 343  cgaggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgccag 402
            | |||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| |
Sbjct: 1252 ccaggtagtcccagaagttgtcgatgatggccgaccgcaggctggcgccgatgccgcccg 1193

                                                                
Query: 403  tgcgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
            | ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 1192 tccgcatgcactcctccacgatcagcacgcggtgggtcttcttgatcgagtt 1141
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  248 bits (125), Expect = 1e-62
 Identities = 206/233 (88%)
 Strand = Plus / Minus

                                                                            
Query: 222      tattggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcc 281
                |||||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||
Sbjct: 26236811 tattggcagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcc 26236752

                                                                            
Query: 282      tccaaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcg 341
                |||| |||||| || || || ||||| |||||||| ||||||| ||||||||||||||| 
Sbjct: 26236751 tccagagttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggca 26236692

                                                                            
Query: 342      tcgaggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgcca 401
                || ||||||||||||||||| || ||||||||||||||||| ||||||||||| || || 
Sbjct: 26236691 tcaaggtagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccaccc 26236632

                                                                     
Query: 402      gtgcgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
                || ||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 26236631 gttcgcatgcactcctccacaatcagaacgcggtgggtcttcttaatggagtt 26236579
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>dbj|AK101464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040H13, full
            insert sequence
          Length = 1406

 Score =  248 bits (125), Expect = 1e-62
 Identities = 206/233 (88%)
 Strand = Plus / Minus

                                                                        
Query: 222  tattggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcc 281
            |||||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||
Sbjct: 1259 tattggcagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcc 1200

                                                                        
Query: 282  tccaaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcg 341
            |||| |||||| || || || ||||| |||||||| ||||||| ||||||||||||||| 
Sbjct: 1199 tccagagttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggca 1140

                                                                        
Query: 342  tcgaggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgcca 401
            || ||||||||||||||||| || ||||||||||||||||| ||||||||||| || || 
Sbjct: 1139 tcaaggtagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccaccc 1080

                                                                 
Query: 402  gtgcgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
            || ||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1079 gttcgcatgcactcctccacaatcagaacgcggtgggtcttcttaatggagtt 1027
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>dbj|AK063753.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A03, full
            insert sequence
          Length = 1415

 Score =  248 bits (125), Expect = 1e-62
 Identities = 206/233 (88%)
 Strand = Plus / Minus

                                                                        
Query: 222  tattggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcc 281
            |||||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||
Sbjct: 1258 tattggcagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcc 1199

                                                                        
Query: 282  tccaaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcg 341
            |||| |||||| || || || ||||| |||||||| ||||||| ||||||||||||||| 
Sbjct: 1198 tccagagttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggca 1139

                                                                        
Query: 342  tcgaggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgcca 401
            || ||||||||||||||||| || ||||||||||||||||| ||||||||||| || || 
Sbjct: 1138 tcaaggtagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccaccc 1079

                                                                 
Query: 402  gtgcgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
            || ||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1078 gttcgcatgcactcctccacaatcagaacgcggtgggtcttcttaatggagtt 1026
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  248 bits (125), Expect = 1e-62
 Identities = 206/233 (88%)
 Strand = Plus / Minus

                                                                            
Query: 222      tattggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcc 281
                |||||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||
Sbjct: 26164987 tattggcagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcc 26164928

                                                                            
Query: 282      tccaaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcg 341
                |||| |||||| || || || ||||| |||||||| ||||||| ||||||||||||||| 
Sbjct: 26164927 tccagagttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggca 26164868

                                                                            
Query: 342      tcgaggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgcca 401
                || ||||||||||||||||| || ||||||||||||||||| ||||||||||| || || 
Sbjct: 26164867 tcaaggtagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccaccc 26164808

                                                                     
Query: 402      gtgcgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
                || ||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 26164807 gttcgcatgcactcctccacaatcagaacgcggtgggtcttcttaatggagtt 26164755
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>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb
           from chromosome 12 of cultivar Nipponbare of ssp.
           japonica of Oryza sativa (rice), complete sequence
          Length = 133978

 Score =  248 bits (125), Expect = 1e-62
 Identities = 206/233 (88%)
 Strand = Plus / Minus

                                                                       
Query: 222 tattggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcc 281
           |||||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||
Sbjct: 795 tattggcagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcc 736

                                                                       
Query: 282 tccaaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcg 341
           |||| |||||| || || || ||||| |||||||| ||||||| ||||||||||||||| 
Sbjct: 735 tccagagttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggca 676

                                                                       
Query: 342 tcgaggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgcca 401
           || ||||||||||||||||| || ||||||||||||||||| ||||||||||| || || 
Sbjct: 675 tcaaggtagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccaccc 616

                                                                
Query: 402 gtgcgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
           || ||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 615 gttcgcatgcactcctccacaatcagaacgcggtgggtcttcttaatggagtt 563
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>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144241

 Score =  248 bits (125), Expect = 1e-62
 Identities = 206/233 (88%)
 Strand = Plus / Minus

                                                                          
Query: 222    tattggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcc 281
              |||||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||
Sbjct: 127049 tattggcagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcc 126990

                                                                          
Query: 282    tccaaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcg 341
              |||| |||||| || || || ||||| |||||||| ||||||| ||||||||||||||| 
Sbjct: 126989 tccagagttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggca 126930

                                                                          
Query: 342    tcgaggtagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgcca 401
              || ||||||||||||||||| || ||||||||||||||||| ||||||||||| || || 
Sbjct: 126929 tcaaggtagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccaccc 126870

                                                                   
Query: 402    gtgcgcatgcactcctccacaatcagcacgcggtgggtcttcttgatggagtt 454
              || ||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 126869 gttcgcatgcactcctccacaatcagaacgcggtgggtcttcttaatggagtt 126817
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>gb|BT016687.1| Zea mays clone Contig520 mRNA sequence
          Length = 1423

 Score =  238 bits (120), Expect = 1e-59
 Identities = 189/212 (89%)
 Strand = Plus / Minus

                                                                        
Query: 243  gcagcaacaatctgggcaggctgcacgactgtcgcatcctccaaagttgcggcgtacggg 302
            ||||| || ||||||||||| ||  | || || |||||||||| ||| || || || |||
Sbjct: 1208 gcagccacgatctgggcagggtgggcaacggttgcatcctccagagtcgcagcatatggg 1149

                                                                        
Query: 303  gtcggcacatcctgagatgacaggcacatgatgggggcgtcgaggtagtcccagaagttg 362
            || |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 1148 gtaggcacatcctgagatgacaggcacatgatgggggcgtcaaggtagtcccagaaattg 1089

                                                                        
Query: 363  tcgatgatggccgacctcagactggcgccgatcccgccagtgcgcatgcactcctccaca 422
            |||| |||||||||||| ||  ||||||||||||| || |||||||||||||||||||| 
Sbjct: 1088 tcgacgatggccgacctaagggtggcgccgatcccacccgtgcgcatgcactcctccacg 1029

                                            
Query: 423  atcagcacgcggtgggtcttcttgatggagtt 454
            ||||||||||||||||||||||||||||||||
Sbjct: 1028 atcagcacgcggtgggtcttcttgatggagtt 997
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>dbj|AK104972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A07, full
           insert sequence
          Length = 397

 Score =  176 bits (89), Expect = 4e-41
 Identities = 140/157 (89%)
 Strand = Plus / Minus

                                                                       
Query: 225 tggcatatttgctcgacagcagcaacaatctgggcaggctgcacgactgtcgcatcctcc 284
           |||||||||||||| || ||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 158 tggcatatttgctcaacggcagccacaatctgggcaggctgcacgacggtggcatcctcc 99

                                                                       
Query: 285 aaagttgcggcgtacggggtcggcacatcctgagatgacaggcacatgatgggggcgtcg 344
           | ||  || || ||||| |||||||||||||| || |||| |||||||||||| ||||| 
Sbjct: 98  agaggcgcagcatacggcgtcggcacatcctgcgacgacaagcacatgatgggtgcgtca 39

                                                
Query: 345 aggtagtcccagaagttgtcgatgatggccgacctca 381
           |||||||||||||||||||||||||||||||| ||||
Sbjct: 38  aggtagtcccagaagttgtcgatgatggccgatctca 2



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 115 aagcctataccacaatgaacacctcgctaca 145
           ||||||||||||||||| | |||||||||||
Sbjct: 254 aagcctataccacaatggatacctcgctaca 224
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>gb|AF124755.1|AF124755 Pinus banksiana pyruvate dehydrogenase E1 beta subunit (Sb68) gene,
           partial cds
          Length = 517

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 99/122 (81%)
 Strand = Plus / Minus

                                                                       
Query: 309 acatcctgagatgacaggcacatgatgggggcgtcgaggtagtcccagaagttgtcgatg 368
           |||||||| || || | |||||||||||| || || | ||||||||||||||| || || 
Sbjct: 247 acatcctgtgaagataagcacatgatgggtgcatctaagtagtcccagaagttttcaata 188

                                                                       
Query: 369 atggccgacctcagactggcgccgatcccgccagtgcgcatgcactcctccacaatcagc 428
           || || | ||| ||||| || || || || ||||| ||||||||||| || |||||||||
Sbjct: 187 attgcagccctgagactcgctccaatgccaccagtacgcatgcactcttcaacaatcagc 128

             
Query: 429 ac 430
           ||
Sbjct: 127 ac 126
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>gb|AY104779.1| Zea mays PCO116203 mRNA sequence
          Length = 1131

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 426  agcacgcggtgggtcttcttgatggagtt 454
            |||||||||||||||||||||||||||||
Sbjct: 1131 agcacgcggtgggtcttcttgatggagtt 1103
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>gb|AF051249.1|AF051249 Picea mariana pyruvate dehydrogenase E1 beta subunit (Sb68) mRNA,
           partial cds
          Length = 1047

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 348 tagtcccagaagttgtcgatgatggccgacctcagactggcgccgatcccgccagtgcgc 407
           |||||||||||||| ||||| || || | ||| ||||| || || || || ||||| |||
Sbjct: 737 tagtcccagaagttttcgataattgcagccctgagactagctccaatgccaccagtacgc 678

                                  
Query: 408 atgcactcctccacaatcagcac 430
           |||||||| || |||||||||||
Sbjct: 677 atgcactcttcaacaatcagcac 655
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>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24,
              Map qA7.1, complete sequences
          Length = 393632

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 399    ccagtgcgcatgcactcctcc 419
              |||||||||||||||||||||
Sbjct: 291229 ccagtgcgcatgcactcctcc 291209
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>gb|AC165346.4| Mus musculus BAC clone RP23-354N5 from chromosome 13, complete sequence
          Length = 233740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 308    cacatcctgagatgacaggcacatg 332
              |||||||||||||||||||| ||||
Sbjct: 219216 cacatcctgagatgacaggcgcatg 219240
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>gb|AC124183.4| Mus musculus BAC clone RP23-213I18 from 13, complete sequence
          Length = 215251

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 308   cacatcctgagatgacaggcacatg 332
             |||||||||||||||||||| ||||
Sbjct: 75337 cacatcctgagatgacaggcgcatg 75313
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>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5
          Length = 348178

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 7      agatttcttccaataaacccgagtt 31
              |||||||||||||||||| ||||||
Sbjct: 279663 agatttcttccaataaacacgagtt 279639
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>dbj|AK132272.1| Mus musculus 18 days pregnant adult female placenta and extra
            embryonic tissue cDNA, RIKEN full-length enriched
            library, clone:3830420C14 product:G-protein-coupled
            receptor 50, full insert sequence
          Length = 3069

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 399  ccagtgcgcatgcactcctcc 419
            |||||||||||||||||||||
Sbjct: 2222 ccagtgcgcatgcactcctcc 2202
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>emb|AJ223375.1|PUU223375 Puumala virus RNA, strain Puu/Mellansel/Cg49/94
          Length = 1829

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 aaaaaatggatacaaagccta 121
           |||||||||||||||||||||
Sbjct: 257 aaaaaatggatacaaagccta 277
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>emb|AJ223374.1|PUU223374 Puumala virus RNA, strain Puu/Mellansel/Cg47/94
          Length = 1828

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 aaaaaatggatacaaagccta 121
           |||||||||||||||||||||
Sbjct: 257 aaaaaatggatacaaagccta 277
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>gb|AF099099.1|AF099099 Trypanosoma cruzi TolT1 (tolT1), TolT2 (tolT2), and TolT3 (tolT3)
            genes, complete cds
          Length = 6093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 399  ccagtgcgcatgcactcctccacaa 423
            ||||||||||||||||| |||||||
Sbjct: 3516 ccagtgcgcatgcactcatccacaa 3492



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 399  ccagtgcgcatgcactcctccacaa 423
            ||||||||||||||||| |||||||
Sbjct: 1860 ccagtgcgcatgcactcatccacaa 1836
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>gb|AC002538.1|AC002538 Homo sapiens chromosome 17, clone 138g16, complete sequence
          Length = 106793

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 144   caaggcaaaaatgacaaattaaagg 168
             ||||||||||||||||||| |||||
Sbjct: 78051 caaggcaaaaatgacaaatgaaagg 78027
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>emb|AL840624.14| Mouse DNA sequence from clone RP23-183D3 on chromosome X, complete
             sequence
          Length = 124795

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 399   ccagtgcgcatgcactcctcc 419
             |||||||||||||||||||||
Sbjct: 91257 ccagtgcgcatgcactcctcc 91237
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>gb|AY548382.1| Alcaligenes faecalis strain WM2072 htx/ptx operon, complete sequence
          Length = 8400

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 405  cgcatgcactcctccacaat 424
            ||||||||||||||||||||
Sbjct: 1303 cgcatgcactcctccacaat 1322
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>gb|AC158537.2| Mus musculus BAC clone RP23-2H7 from chromosome 14, complete sequence
          Length = 204554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    attaaaggttcttccaagcc 180
              ||||||||||||||||||||
Sbjct: 122158 attaaaggttcttccaagcc 122139
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>gb|AY728028.1| Cenibacterium arsenoxidans clone M36 FliG (fliG), FliH (fliH), FliI
            (fliI), FliJ (fliJ), FliK (fliK), FliL (fliL), FliM
            (fliM), FliN (fliN), FliO (fliO), and FliP (fliP) genes,
            complete cds
          Length = 8550

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  tttgctcgacagcagcaaca 251
            ||||||||||||||||||||
Sbjct: 5341 tttgctcgacagcagcaaca 5322
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>gb|AF061267.2| Pseudomonas stutzeri strain WM88 operon htx, complete sequence
          Length = 14979

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 cgcatgcactcctccacaat 424
           ||||||||||||||||||||
Sbjct: 749 cgcatgcactcctccacaat 768
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 430    cgcggtgggtcttcttgatg 449
              ||||||||||||||||||||
Sbjct: 817705 cgcggtgggtcttcttgatg 817686
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>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome
          Length = 1395502

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    gctgaaacagatgatgccct 222
              ||||||||||||||||||||
Sbjct: 920888 gctgaaacagatgatgccct 920869
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>gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosome 1, complete
            sequence
          Length = 197488

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   aaacccgagttcagacccct 40
            ||||||||||||||||||||
Sbjct: 2149 aaacccgagttcagacccct 2130
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>gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete sequence
          Length = 226443

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aaacccgagttcagacccct 40
             ||||||||||||||||||||
Sbjct: 73237 aaacccgagttcagacccct 73256
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>gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete sequence
          Length = 135726

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   caaaaatgacaaattaaagg 168
             ||||||||||||||||||||
Sbjct: 43476 caaaaatgacaaattaaagg 43457
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>emb|AL158012.14| Human DNA sequence from clone RP11-157A10 on chromosome 9 Contains part
             of the gene for a novel GLI Kruppel family member zinc
             finger protein (FLJ38999), complete sequence
          Length = 124474

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   agatgacaggcacatgatgg 336
             ||||||||||||||||||||
Sbjct: 81320 agatgacaggcacatgatgg 81301
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>emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigroviridis
          Length = 265677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    aggcaaaaatgacaaattaa 165
              ||||||||||||||||||||
Sbjct: 205909 aggcaaaaatgacaaattaa 205890
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>emb|AL732457.1|SPBPB21E7 S.pombe chromosome II BAC pB21E7
          Length = 21862

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  tgacaaattaaaggttcttc 174
            ||||||||||||||||||||
Sbjct: 4559 tgacaaattaaaggttcttc 4540
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>gb|AC112481.2| Homo sapiens 12 BAC RP11-20L19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116996

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     tcaaagatttcttccaataa 22
             ||||||||||||||||||||
Sbjct: 68874 tcaaagatttcttccaataa 68893
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>emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence
          Length = 265677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    aggcaaaaatgacaaattaa 165
              ||||||||||||||||||||
Sbjct: 205909 aggcaaaaatgacaaattaa 205890
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 372     gccgacctcagactggcgcc 391
               ||||||||||||||||||||
Sbjct: 6173160 gccgacctcagactggcgcc 6173179
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>emb|CT010474.12| Mouse DNA sequence from clone RP23-199B14 on chromosome 12, complete
              sequence
          Length = 205340

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    caaaaatgacaaattaaagg 168
              ||||||||||||||||||||
Sbjct: 114550 caaaaatgacaaattaaagg 114569
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>gb|AC172892.1| Mus musculus BAC clone RP23-269B2 from chromosome 16, complete sequence
          Length = 206740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   caaggcaaaaatgacaaatt 163
             ||||||||||||||||||||
Sbjct: 95833 caaggcaaaaatgacaaatt 95814
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>gb|U09962.1|HSU09962 Human ferritin H (FTHP2) pseudogene, partial cds
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  acaaggcaaaaatgacaaat 162
            ||||||||||||||||||||
Sbjct: 1052 acaaggcaaaaatgacaaat 1071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,128,707
Number of Sequences: 3902068
Number of extensions: 4128707
Number of successful extensions: 107005
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106872
Number of HSP's gapped (non-prelim): 133
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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