ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart21a01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104741.1| Zea mays PCO101081 mRNA sequence Length = 749 Score = 153 bits (77), Expect = 6e-34 Identities = 119/133 (89%) Strand = Plus / Minus Query: 330 cgccgccatcttgtgatgaggagtctgctccttctggtacttatggagctggccgcagaa 389 |||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||| | Sbjct: 321 cgcccccatcttgtggtgcggagtctgctccttctggtacttgtggagctggccgcagta 262 Query: 390 gagggcgttgcgggggacggccatctcggtcttgtcggcgccgtcctcggggttgacgac 449 ||| |||||| ||||| ||||||||||||||||| | || |||||| ||||||||||| Sbjct: 261 gagagcgttggcggggatggccatctcggtcttgttgccggtgtcctcagggttgacgac 202 Query: 450 cctgacgtagacc 462 ||||||||||||| Sbjct: 201 cctgacgtagacc 189
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 360 cttctggtacttatggagctggccgcagaagagggcgttgcgggggacggccatctcggt 419 |||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 60141 cttctggtacttgtgaagctggccgcagaagagggcgttgtcggggatggccatctcggt 60200 Query: 420 cttgtcggcgccgtcctcggggttgacgaccctgacgtagacc 462 ||||| | || |||||| |||||||||||||||||||||||| Sbjct: 60201 cttgttgccggtgtcctcagggttgacgaccctgacgtagacc 60243
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 360 cttctggtacttatggagctggccgcagaagagggcgttgcgggggacggccatctcggt 419 |||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 143788 cttctggtacttgtgaagctggccgcagaagagggcgttgtcggggatggccatctcggt 143847 Query: 420 cttgtcggcgccgtcctcggggttgacgaccctgacgtagacc 462 ||||| | || |||||| |||||||||||||||||||||||| Sbjct: 143848 cttgttgccggtgtcctcagggttgacgaccctgacgtagacc 143890
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 360 cttctggtacttatggagctggccgcagaagagggcgttgcgggggacggccatctcggt 419 |||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 18934900 cttctggtacttgtgaagctggccgcagaagagggcgttgtcggggatggccatctcggt 18934841 Query: 420 cttgtcggcgccgtcctcggggttgacgaccctgacgtagacc 462 ||||| | || |||||| |||||||||||||||||||||||| Sbjct: 18934840 cttgttgccggtgtcctcagggttgacgaccctgacgtagacc 18934798 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 303 cggcggcacggccgccgcagacgccgccgccgcc 336 ||||| || ||||||||| ||||||||||||||| Sbjct: 19694634 cggcgccaaggccgccgccgacgccgccgccgcc 19694601 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 13219113 ccgccgcagacgccgccgccgc 13219134
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 360 cttctggtacttatggagctggccgcagaagagggcgttgcgggggacggccatctcggt 419 |||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 18946154 cttctggtacttgtgaagctggccgcagaagagggcgttgtcggggatggccatctcggt 18946095 Query: 420 cttgtcggcgccgtcctcggggttgacgaccctgacgtagacc 462 ||||| | || |||||| |||||||||||||||||||||||| Sbjct: 18946094 cttgttgccggtgtcctcagggttgacgaccctgacgtagacc 18946052 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 303 cggcggcacggccgccgcagacgccgccgccgcc 336 ||||| || ||||||||| ||||||||||||||| Sbjct: 19705910 cggcgccaaggccgccgccgacgccgccgccgcc 19705877 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 13226453 ccgccgcagacgccgccgccgc 13226474
>ref|NM_197271.1| Oryza sativa (japonica cultivar-group) putative ascorbate oxidase (OSJNBb0015K05.9), mRNA Length = 1722 Score = 109 bits (55), Expect = 8e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 376 agctggccgcagaagagggcgttgcgggggacggccatctcggtcttgtcggcgccgtcc 435 |||||||||||||||||||||||| ||||| ||||||||||||||||| | || |||| Sbjct: 1598 agctggccgcagaagagggcgttgtcggggatggccatctcggtcttgttgccggtgtcc 1539 Query: 436 tcggggttgacgaccctgacgtagacc 462 || |||||||||||||||||||||||| Sbjct: 1538 tcagggttgacgaccctgacgtagacc 1512
>emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 in linkage group 18, complete sequence Length = 188895 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 79 aacaaaacaaaacatggtgcgtgg 102 |||||||||||||||||||||||| Sbjct: 139107 aacaaaacaaaacatggtgcgtgg 139084
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 317 ccgcagacgccgccgccgccatc 339 ||||||||||||||||||||||| Sbjct: 194448 ccgcagacgccgccgccgccatc 194426
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 ccgcagacgccgccgccgccatc 339 ||||||||||||||||||||||| Sbjct: 48849 ccgcagacgccgccgccgccatc 48871
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 acggccgccgcagacgccgccgccgcc 336 ||||||||||||| ||||||||||||| Sbjct: 13791464 acggccgccgcagccgccgccgccgcc 13791490 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 25379172 ccgccgcagacgccgccgccgc 25379151 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 3880474 ccgccgcagacgccgccgccgc 3880495 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 305 gcggcacggccgccgcagacgccgccgcc 333 ||||||| ||||||||||| ||||||||| Sbjct: 31675828 gcggcacagccgccgcagaagccgccgcc 31675800 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 34960573 gccgccgccgccgccgccgccgccatct 34960546 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 31886130 ggccgccgcagtcgccgccgccgc 31886153 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccg 334 |||||||||||| ||||||||||| Sbjct: 26171746 cggccgccgcagccgccgccgccg 26171769
>emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062H02, complete sequence Length = 166747 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgcc 336 ||||||||||||||||||||||| Sbjct: 54235 ccgccgcagacgccgccgccgcc 54213
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 acggccgccgcagacgccgccgccgcc 336 ||||||||||||| ||||||||||||| Sbjct: 67992 acggccgccgcagccgccgccgccgcc 68018
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgcc 336 ||||||||||||||||||||||| Sbjct: 14897497 ccgccgcagacgccgccgccgcc 14897475 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccg 334 |||||||||||||||||||||| Sbjct: 34986388 gccgccgcagacgccgccgccg 34986367 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 16982478 ccgccgcagacgccgccgccgc 16982499 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 13506163 ccgccgcagacgccgccgccgc 13506184 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 11873885 ccgccgcagacgccgccgccgc 11873906 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 8117308 ccgccgcagacgccgccgccgc 8117287 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 cgccgcagacgccgccgccgc 335 ||||||||||||||||||||| Sbjct: 11721897 cgccgcagacgccgccgccgc 11721877 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ccgcagacgccgccgccgcc 336 |||||||||||||||||||| Sbjct: 29103635 ccgcagacgccgccgccgcc 29103616 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 gccgcagacgccgccgccgc 335 |||||||||||||||||||| Sbjct: 3089369 gccgcagacgccgccgccgc 3089350
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 acggccgccgcagacgccgccgccgcc 336 ||||||||||||| ||||||||||||| Sbjct: 13786439 acggccgccgcagccgccgccgccgcc 13786465 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 25470481 ccgccgcagacgccgccgccgc 25470460 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 23938657 ccgccgcagacgccgccgccgc 23938636 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 3880585 ccgccgcagacgccgccgccgc 3880606 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 305 gcggcacggccgccgcagacgccgccgcc 333 ||||||| ||||||||||| ||||||||| Sbjct: 31766344 gcggcacagccgccgcagaagccgccgcc 31766316 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 35050645 gccgccgccgccgccgccgccgccatct 35050618 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 31976646 ggccgccgcagtcgccgccgccgc 31976669 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccg 334 |||||||||||| ||||||||||| Sbjct: 26263055 cggccgccgcagccgccgccgccg 26263078
>ref|XM_550030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 693 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 585 ccgccgcagacgccgccgccgc 564
>ref|XM_550422.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2292 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccat 338 |||||||| ||||||||||||||||| Sbjct: 1028 gccgccgccgacgccgccgccgccat 1053
>ref|XM_550129.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcca 337 ||||||||||| |||||||||||||| Sbjct: 81 ggccgccgcagccgccgccgccgcca 106
>ref|XM_480151.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1803 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgcca 337 ||||||||| |||||||||||||||| Sbjct: 72 ggccgccgcggacgccgccgccgcca 47
>ref|XM_474411.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 675 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccg 334 |||||||||||||||||||||| Sbjct: 500 gccgccgcagacgccgccgccg 479
>ref|XM_469086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 810 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 646 ccgccgcagacgccgccgccgc 625
>ref|XM_462701.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 378 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 32 ccgccgcagacgccgccgccgc 53
>ref|NM_197407.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0028C01.40), mRNA Length = 1701 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 303 cggcggcacggccgccgcagacgccgccgccgcc 336 ||||| || ||||||||| ||||||||||||||| Sbjct: 390 cggcgccaaggccgccgccgacgccgccgccgcc 423
>ref|NM_193978.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 285 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 168 ccgccgcagacgccgccgccgc 147
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 gcggcacggccgccgcagacgc 326 |||||||||||||||||||||| Sbjct: 3248535 gcggcacggccgccgcagacgc 3248514 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cacggccaacggcggcacggccgccgca 321 ||||||||||||||||||| || ||||| Sbjct: 652625 cacggccaacggcggcacgaccaccgca 652598
>ref|XM_515927.1| PREDICTED: Pan troglodytes similar to Homeobox protein Hox-D11 (Hox-4F) (LOC459761), mRNA Length = 933 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 355 cggccgccgcagccgccgccgccgcc 330
>ref|XM_476478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 751 ccgccgcagacgccgccgccgc 730
>ref|XM_476470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 570 ccgccgcagacgccgccgccgc 549
>ref|XM_476462.1| Oryza sativa (japonica cultivar-group), mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 570 ccgccgcagacgccgccgccgc 549
>gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0115F21, complete sequence Length = 128493 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 102208 ccgccgcagacgccgccgccgc 102229
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 23941 cggccgccgcagccgccgccgccgcc 23966
>gb|AY020356.1| Oryza sativa microsatellite MRG2681 containing (GA)X15, closest to marker C225, genomic sequence Length = 230 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 203 ccgccgcagacgccgccgccgc 182
>gb|AC147804.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0070G02 map near S13580, complete sequence Length = 73686 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 187 ccgccgcagacgccgccgccgc 208
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 69885 ccgccgcagacgccgccgccgc 69906
>gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBb0061M13, complete sequence Length = 174910 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 156727 cggccgccgcagtcgccgccgccgcc 156702
>ref|XM_882652.1| PREDICTED: Bos taurus similar to phosphatidylglycerophosphate synthase, transcript variant 2 (LOC535126), mRNA Length = 2323 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccat 338 |||||||||| ||||||||||||||| Sbjct: 35 gccgccgcagccgccgccgccgccat 10
>ref|XM_615126.2| PREDICTED: Bos taurus similar to phosphatidylglycerophosphate synthase, transcript variant 1 (LOC535126), mRNA Length = 2234 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccat 338 |||||||||| ||||||||||||||| Sbjct: 35 gccgccgcagccgccgccgccgccat 10
>gb|AC104710.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1286_E05, complete sequence Length = 106212 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 103412 cggccgccgcagccgccgccgccgcc 103437
>gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01, complete sequence Length = 136120 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 14813 cggccgccgcagtcgccgccgccgcc 14788
>ref|XM_994637.1| PREDICTED: Mus musculus homeo box D8 (Hoxd8), mRNA Length = 1991 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 79 cggccgccgcagccgccgccgccgcc 54
>ref|XM_355338.4| PREDICTED: Mus musculus homeo box D8 (Hoxd8), mRNA Length = 1991 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 79 cggccgccgcagccgccgccgccgcc 54
>ref|XM_912169.2| PREDICTED: Mus musculus homeo box D8 (Hoxd8), mRNA Length = 1991 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 79 cggccgccgcagccgccgccgccgcc 54
>ref|XM_546089.2| PREDICTED: Canis familiaris similar to egl nine homolog 1 (LOC488971), mRNA Length = 1847 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 ||||||||||| |||||||||||||| Sbjct: 511 cggccgccgcacacgccgccgccgcc 486
>emb|AL731557.7| Human DNA sequence from clone RP11-501J20 on chromosome 10 Contains two novel genes, the gene for a novel protein (possible ortholog of rodent ventral anterior homeobox containing gene 1 (VAX1)), a ribosomal protein L12 (RPL12) pseudogene, the 5' end of the SLC18A2 gene for member 2 solute carrier family 18 (vesicular monoamine), a novel gene and ten CpG islands, complete sequence Length = 142068 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 32023 cggccgccgcagccgccgccgccgcc 31998
>gb|BC105551.1| Bos taurus similar to phosphatidylglycerophosphate synthase, mRNA (cDNA clone MGC:129082 IMAGE:8121736), complete cds Length = 3607 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccat 338 |||||||||| ||||||||||||||| Sbjct: 32 gccgccgcagccgccgccgccgccat 7
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 65362 ccgccgcagacgccgccgccgc 65383
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 64188 ccgccgcagacgccgccgccgc 64209
>ref|NM_000679.3| Homo sapiens adrenergic, alpha-1B-, receptor (ADRA1B), mRNA Length = 2272 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||||| Sbjct: 1283 cggccgccgccgacgccgccgccgcc 1308
>emb|AL731614.4|OSJN00260 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079F16, complete sequence Length = 157801 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 42480 ccgccgcagacgccgccgccgc 42501
>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete sequence Length = 137366 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 303 cggcggcacggccgccgcagacgccgccgccgcc 336 ||||| || ||||||||| ||||||||||||||| Sbjct: 82878 cggcgccaaggccgccgccgacgccgccgccgcc 82911
>gb|AC068657.6| Homo sapiens chromosome 5 clone CTB-67I13, complete sequence Length = 128332 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||||| Sbjct: 52763 cggccgccgccgacgccgccgccgcc 52788
>tpg|BK000912.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M305, complete sequence Length = 11131 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 6046 ccgccgcagacgccgccgccgc 6025
>tpg|BK000898.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M298, complete sequence Length = 11010 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 4857 ccgccgcagacgccgccgccgc 4878
>tpg|BK000869.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M266, complete sequence Length = 8882 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 3073 ccgccgcagacgccgccgccgc 3094
>gb|AC015584.18| Mus musculus, clone RP23-400H17, complete sequence Length = 214875 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 142497 cggccgccgcagccgccgccgccgcc 142472
>tpg|BK000359.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M79 transposase gene, complete cds Length = 14308 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 6010 ccgccgcagacgccgccgccgc 5989
>tpg|BK000344.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) transposon Rim2-M64 transposase gene, complete cds Length = 10556 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 5089 ccgccgcagacgccgccgccgc 5110
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 6280927 ccgccgcagacgccgccgccgc 6280948 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 4130481 ccgccgcagacgccgccgccgc 4130502 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 cgccgccgccgccatcttgt 343 |||||||||||||||||||| Sbjct: 19820321 cgccgccgccgccatcttgt 19820302 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gccgcagacgccgccgccgc 335 |||||||||||||||||||| Sbjct: 1531614 gccgcagacgccgccgccgc 1531633
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 4846065 ccgccgcagacgccgccgccgc 4846044 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||| ||||||||||||||| Sbjct: 11368725 gccgccgccgacgccgccgccgcc 11368702 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgcc 333 |||||||||||||||||||| Sbjct: 4605135 ccgccgcagacgccgccgcc 4605154
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 16715465 ccgccgcagacgccgccgccgc 16715444 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 11489073 ccgccgcagacgccgccgccgc 11489094 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcca 337 ||||||||| |||||||||||||||| Sbjct: 3119051 ggccgccgcggacgccgccgccgcca 3119076 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 9117337 gccgccgcagccgccgccgccgcc 9117360
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 16792209 ccgccgcagacgccgccgccgc 16792188 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 2960698 ccgccgcagacgccgccgccgc 2960677 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 1440326 ccgccgcagacgccgccgccgc 1440347 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 1407170 ccgccgcagacgccgccgccgc 1407191 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 1374021 ccgccgcagacgccgccgccgc 1374042 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 1340868 ccgccgcagacgccgccgccgc 1340889 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgcc 333 ||||||||||||||||||||| Sbjct: 26770579 gccgccgcagacgccgccgcc 26770599 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcc 336 ||||||||||| ||||||||||||| Sbjct: 25414081 ggccgccgcagccgccgccgccgcc 25414105
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 23676116 ccgccgcagacgccgccgccgc 23676095 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 18865134 ccgccgcagacgccgccgccgc 18865155
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 18550826 cggccgccgcagccgccgccgccgcc 18550851 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 10987523 cggccgccgcagtcgccgccgccgcc 10987498 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 6538774 ccgccgcagacgccgccgccgc 6538795 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 303 cggcggcacggccgccgcagacgccgccgccgc 335 |||||||||||| ||||| | |||||||||||| Sbjct: 27814525 cggcggcacggcggccgcggccgccgccgccgc 27814493 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgc 335 |||||||||||| |||||||||||| Sbjct: 27718836 cggccgccgcagccgccgccgccgc 27718860 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 17900296 gccgccgcagccgccgccgccgcc 17900319 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgcc 333 |||||||||||||||||||| Sbjct: 17120943 ccgccgcagacgccgccgcc 17120924 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ccgcagacgccgccgccgcc 336 |||||||||||||||||||| Sbjct: 14803647 ccgcagacgccgccgccgcc 14803628
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 41656289 ccgccgcagacgccgccgccgc 41656310 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 14352269 ccgccgcagacgccgccgccgc 14352290 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccat 338 |||||||| ||||||||||||||||| Sbjct: 4404162 gccgccgccgacgccgccgccgccat 4404137 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcca 337 ||||||||||| |||||||||||||| Sbjct: 2519464 ggccgccgcagccgccgccgccgcca 2519489 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 1824092 ccgccgcagacgccgccgccgc 1824071 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 cgccgcagacgccgccgccgccatc 339 |||||| |||||||||||||||||| Sbjct: 38468979 cgccgccgacgccgccgccgccatc 38468955 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||| ||||||||||||||| Sbjct: 37537145 gccgccgccgacgccgccgccgcc 37537122 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgcc 333 |||||||||||||||||||| Sbjct: 14848444 ccgccgcagacgccgccgcc 14848463 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 8731429 gccgccgccgccgccgccgccgccatct 8731456 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 cacggccgccgcagacgccgccgccgcc 336 |||||||||||| | ||||||||||||| Sbjct: 5024662 cacggccgccgccgccgccgccgccgcc 5024635
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 86947 ccgccgcagacgccgccgccgc 86968
>emb|AL606597.4|OSJN00042 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0045P24, complete sequence Length = 124420 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 50840 ccgccgcagacgccgccgccgc 50819
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466H10 Length = 176530 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 71891 ccgccgcagacgccgccgccgc 71912
>gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-387A1, complete sequence Length = 175667 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 91696 cggccgccgcagccgccgccgccgcc 91671
>emb|BX936166.1| Gallus gallus finished cDNA, clone ChEST143h17 Length = 1058 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccat 338 |||||||||| ||||||||||||||| Sbjct: 37 gccgccgcagccgccgccgccgccat 12
>emb|BX934492.1| Gallus gallus finished cDNA, clone ChEST606k15 Length = 1052 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccat 338 |||||||||| ||||||||||||||| Sbjct: 32 gccgccgcagccgccgccgccgccat 7
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccat 338 |||||||| ||||||||||||||||| Sbjct: 64244 gccgccgccgacgccgccgccgccat 64219
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcca 337 ||||||||||| |||||||||||||| Sbjct: 73885 ggccgccgcagccgccgccgccgcca 73910
>ref|XM_214994.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5730406I15 (predicted) (LOC293142), mRNA Length = 1349 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 gacgccgccgccgccatcttgt 343 |||||||||||||||||||||| Sbjct: 23 gacgccgccgccgccatcttgt 2
>gb|AF154915.1|AF154915 Homo sapiens transcription factor HOXD12 (HOXD12) and transcription factor HOXD11 (HOXD11) genes, complete cds Length = 10469 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 8537 cggccgccgcagccgccgccgccgcc 8512
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 43207 ccgccgcagacgccgccgccgc 43228
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 30699 ccgccgcagacgccgccgccgc 30720
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 65474 ccgccgcagacgccgccgccgc 65453
>dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1157F09 Length = 148802 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 103546 ccgccgcagacgccgccgccgc 103567
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 13666 ccgccgcagacgccgccgccgc 13687
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 28597 ccgccgcagacgccgccgccgc 28576
>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06 Length = 156500 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 24192 ccgccgcagacgccgccgccgc 24171
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 138856 ccgccgcagacgccgccgccgc 138877 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 105703 ccgccgcagacgccgccgccgc 105724
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0024L18 Length = 150128 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 6753 ccgccgcagacgccgccgccgc 6732
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1249D05 Length = 132526 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 25915 ccgccgcagacgccgccgccgc 25936
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 130985 ccgccgcagacgccgccgccgc 130964
>dbj|AP005604.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1212_C12 Length = 147782 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 80511 ccgccgcagacgccgccgccgc 80532 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 47355 ccgccgcagacgccgccgccgc 47376 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 14206 ccgccgcagacgccgccgccgc 14227
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 132121 ccgccgcagacgccgccgccgc 132100
>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1103_E04 Length = 111354 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 8776 ccgccgcagacgccgccgccgc 8755
>dbj|AP005464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1027A11 Length = 169506 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 91375 ccgccgcagacgccgccgccgc 91354
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 103062 ccgccgcagacgccgccgccgc 103083
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcca 337 ||||||||| |||||||||||||||| Sbjct: 169774 ggccgccgcggacgccgccgccgcca 169799
>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1066_B03 Length = 115339 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcca 337 ||||||||| |||||||||||||||| Sbjct: 78535 ggccgccgcggacgccgccgccgcca 78560
>dbj|AK110423.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-A08, full insert sequence Length = 2292 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccat 338 |||||||| ||||||||||||||||| Sbjct: 1028 gccgccgccgacgccgccgccgccat 1053
>dbj|AK105205.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G03, full insert sequence Length = 592 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccg 334 |||||||||||||||||||||| Sbjct: 116 gccgccgcagacgccgccgccg 95
>dbj|AK066374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060C14, full insert sequence Length = 2073 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 229 cggccgccgcagtcgccgccgccgcc 204
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccg 334 |||||||||||||||||||||| Sbjct: 16544 gccgccgcagacgccgccgccg 16523
>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete sequence Length = 70311 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgcca 337 ||||||||| |||||||||||||||| Sbjct: 7248 ggccgccgccgacgccgccgccgcca 7223
>ref|NM_021192.2| Homo sapiens homeobox D11 (HOXD11), mRNA Length = 1463 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 352 cggccgccgcagccgccgccgccgcc 327
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 tgccgccgcgctacgacgcgaa 245 |||||||||||||||||||||| Sbjct: 1125259 tgccgccgcgctacgacgcgaa 1125280
>emb|AL928644.12| Mouse DNA sequence from clone RP23-313J15 on chromosome 2, complete sequence Length = 219870 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||||| ||||||||||||| Sbjct: 190558 cggccgccgcagccgccgccgccgcc 190533
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 6280802 ccgccgcagacgccgccgccgc 6280823 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 4130468 ccgccgcagacgccgccgccgc 4130489 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 cgccgccgccgccatcttgt 343 |||||||||||||||||||| Sbjct: 19746535 cgccgccgccgccatcttgt 19746516 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gccgcagacgccgccgccgc 335 |||||||||||||||||||| Sbjct: 1531614 gccgcagacgccgccgccgc 1531633
>emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018A10, complete sequence Length = 133238 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 33957 ccgccgcagacgccgccgccgc 33978
>emb|AL831805.4|CNS08CAI Oryza sativa chromosome 12, . BAC OSJNBa0085J02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 166508 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 58345 ccgccgcagacgccgccgccgc 58324
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 72877 ccgccgcagacgccgccgccgc 72898
>emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0066J23, complete sequence Length = 156934 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgccgc 335 |||||||||||||||||||||| Sbjct: 37734 ccgccgcagacgccgccgccgc 37755
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccg 334 |||||||||||||||||||||| Sbjct: 45438 gccgccgcagacgccgccgccg 45417
>gb|U03865.1|HSU03865 Human adrenergic alpha-1b receptor protein mRNA, complete cds Length = 1738 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||||| Sbjct: 1233 cggccgccgccgacgccgccgccgcc 1258
>gb|M99590.1|HUMADRENB Homo sapiens (clone pmt2-huma1b) alpha-1B adrenergic receptor gene sequence Length = 2646 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||||| Sbjct: 1123 cggccgccgccgacgccgccgccgcc 1148
>gb|DQ213498.1| Taeniopygia guttata clone 0058P0010D04 BCL2/adenovirus E1B 19kD interacting protein 1-like mRNA, complete sequence Length = 1214 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgccatcttg 342 ||||||| | ||||||||||||||||||| Sbjct: 59 ccgccgcggccgccgccgccgccatcttg 31
>gb|DQ213497.1| Taeniopygia guttata clone 0058P0031F05 BCL2/adenovirus E1B 19kD interacting protein 1-like mRNA, complete sequence Length = 1214 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgccatcttg 342 ||||||| | ||||||||||||||||||| Sbjct: 59 ccgccgcggccgccgccgccgccatcttg 31
>gb|DQ213496.1| Taeniopygia guttata clone 0058P0024A04 BCL2/adenovirus E1B 19kD interacting protein 1-like mRNA, complete sequence Length = 1146 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgccatcttg 342 ||||||| | ||||||||||||||||||| Sbjct: 33 ccgccgcggccgccgccgccgccatcttg 5
>gb|DQ213495.1| Taeniopygia guttata clone 0058P0017F11 BCL2/adenovirus E1B 19kD interacting protein 1-like mRNA, complete sequence Length = 1214 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgccatcttg 342 ||||||| | ||||||||||||||||||| Sbjct: 59 ccgccgcggccgccgccgccgccatcttg 31
>ref|NM_001031096.1| Gallus gallus additional sex combs like 2 (Drosophila) (ASXL2), mRNA Length = 5430 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgc 335 |||||||||||| |||||||||||| Sbjct: 2186 cggccgccgcagccgccgccgccgc 2210
>ref|XM_479318.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2990 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgcc 333 ||||||||||||||||||||| Sbjct: 101 gccgccgcagacgccgccgcc 81
>ref|XM_506511.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1458_B07.103 mRNA Length = 3057 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgcc 333 ||||||||||||||||||||| Sbjct: 103 gccgccgcagacgccgccgcc 83
>ref|NM_189816.1| Oryza sativa (japonica cultivar-group), mRNA Length = 375 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcc 336 ||||||||||| ||||||||||||| Sbjct: 168 ggccgccgcagccgccgccgccgcc 192
>ref|NM_004473.3| Homo sapiens forkhead box E1 (thyroid transcription factor 2) (FOXE1), mRNA Length = 3473 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccatctt 341 |||||||| | |||||||||||||||||| Sbjct: 1174 gccgccgccgccgccgccgccgccatctt 1202
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgc 335 |||||||||||| |||||||||||| Sbjct: 83394 cggccgccgcagccgccgccgccgc 83418
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 305 gcggcacggccgccgcagacgccgccgcc 333 ||||||| ||||||||||| ||||||||| Sbjct: 4839 gcggcacagccgccgcagaagccgccgcc 4867
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 303 cggcggcacggccgccgcagacgccgccgccgc 335 |||||||||||| ||||| | |||||||||||| Sbjct: 44942 cggcggcacggcggccgcggccgccgccgccgc 44910
>ref|XM_844103.1| PREDICTED: Canis familiaris similar to retinoblastoma-associated protein 140, transcript variant 2 (LOC476580), mRNA Length = 5386 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgccatcttgtg 344 ||||||||| | ||||||||||||||| ||||| Sbjct: 371 ggccgccgccgccgccgccgccgccattttgtg 339
>ref|XM_853022.1| PREDICTED: Canis familiaris similar to retinoblastoma-associated protein 140, transcript variant 4 (LOC476580), mRNA Length = 5326 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgccatcttgtg 344 ||||||||| | ||||||||||||||| ||||| Sbjct: 371 ggccgccgccgccgccgccgccgccattttgtg 339
>ref|XM_852981.1| PREDICTED: Canis familiaris similar to retinoblastoma-associated protein 140, transcript variant 3 (LOC476580), mRNA Length = 5663 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgccatcttgtg 344 ||||||||| | ||||||||||||||| ||||| Sbjct: 371 ggccgccgccgccgccgccgccgccattttgtg 339
>ref|XM_533784.2| PREDICTED: Canis familiaris similar to retinoblastoma-associated protein 140, transcript variant 1 (LOC476580), mRNA Length = 5786 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgccatcttgtg 344 ||||||||| | ||||||||||||||| ||||| Sbjct: 371 ggccgccgccgccgccgccgccgccattttgtg 339
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15, complete sequence Length = 185021 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 cgccgcagacgccgccgccgc 335 ||||||||||||||||||||| Sbjct: 43353 cgccgcagacgccgccgccgc 43333
>gb|AC122852.2| Mus musculus BAC clone RP23-172A6 from 18, complete sequence Length = 189709 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 agcacaaaagatgatccatgc 226 ||||||||||||||||||||| Sbjct: 34248 agcacaaaagatgatccatgc 34268
>gb|AC112268.3| Mus musculus BAC clone RP24-114C23 from 2, complete sequence Length = 167775 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 310 acggccgccgcagacgccgccgccgccat 338 ||||||||||| | ||||||||||||||| Sbjct: 135147 acggccgccgcggccgccgccgccgccat 135119
>emb|AL499604.9| Human DNA sequence from clone RP11-23B15 on chromosome 9 Contains FOXE1 gene for forkhead box E1 (thyroid transcription factor 2), HEMGN gene for hemogen, 2 novel genes and 5 CpG islands, complete sequence Length = 160796 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccatctt 341 |||||||| | |||||||||||||||||| Sbjct: 72712 gccgccgccgccgccgccgccgccatctt 72740
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 305 gcggcacggccgccgcagacgccgccgcc 333 ||||||| ||||||||||| ||||||||| Sbjct: 1054 gcggcacagccgccgcagaagccgccgcc 1026
>emb|Y13386.1|HSTIF2 Homo sapiens TITF2 gene for thyroid transcription factor 2 Length = 1673 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccatctt 341 |||||||| | |||||||||||||||||| Sbjct: 730 gccgccgccgccgccgccgccgccatctt 758
>emb|X94553.1|HSHFKH4 H.sapiens HFKH4 mRNA for fork head like protein Length = 3575 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccatctt 341 |||||||| | |||||||||||||||||| Sbjct: 2982 gccgccgccgccgccgccgccgccatctt 3010
>emb|AJ720990.1| Gallus gallus mRNA for hypothetical protein, clone 31p12 Length = 2197 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 305 gcggcacggccgccgcagacgccgccgcc 333 |||||||||||||||| | |||||||||| Sbjct: 8 gcggcacggccgccgccgccgccgccgcc 36
>emb|AJ719496.1| Gallus gallus mRNA for hypothetical protein, clone 2n14 Length = 5430 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgc 335 |||||||||||| |||||||||||| Sbjct: 2186 cggccgccgcagccgccgccgccgc 2210
>emb|CR859291.1| Pongo pygmaeus mRNA; cDNA DKFZp468P195 (from clone DKFZp468P195) Length = 2859 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatctt 341 |||||||| | |||||||||||||||||| Sbjct: 38 gccgccgccgccgccgccgccgccatctt 10
>ref|NM_001007848.1| Gallus gallus Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 (CBLL1), mRNA Length = 2197 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 305 gcggcacggccgccgcagacgccgccgcc 333 |||||||||||||||| | |||||||||| Sbjct: 8 gcggcacggccgccgccgccgccgccgcc 36
>emb|BX470113.8| Zebrafish DNA sequence from clone DKEY-246M15 in linkage group 17, complete sequence Length = 118640 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 gaacaaaacaaaacatggtgc 98 ||||||||||||||||||||| Sbjct: 59922 gaacaaaacaaaacatggtgc 59942
>dbj|AB225296.1| Aspergillus oryzae cDNA, contig sequence: AoEST2148 Length = 620 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcca 337 |||||||||| |||||||||||||| Sbjct: 229 gccgccgcagccgccgccgccgcca 253
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcca 337 |||||||||| |||||||||||||| Sbjct: 2488087 gccgccgcagccgccgccgccgcca 2488111
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 cgccgcagacgccgccgccgccatc 339 |||||| |||||||||||||||||| Sbjct: 62076 cgccgccgacgccgccgccgccatc 62052
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 cgccgcagacgccgccgccgccatc 339 |||||| |||||||||||||||||| Sbjct: 54394 cgccgccgacgccgccgccgccatc 54370
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgcc 333 ||||||||||||||||||||| Sbjct: 117436 gccgccgcagacgccgccgcc 117456
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcc 336 ||||||||||| ||||||||||||| Sbjct: 107171 ggccgccgcagccgccgccgccgcc 107195
>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0552F09 Length = 134659 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgcc 336 ||||||||||| ||||||||||||| Sbjct: 37798 ggccgccgcagccgccgccgccgcc 37822
>dbj|AP003832.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1458_B07 Length = 99415 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgcc 333 ||||||||||||||||||||| Sbjct: 16753 gccgccgcagacgccgccgcc 16773
>dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E23, full insert sequence Length = 2712 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 303 cggcggcacggccgccgcagacgccgccgccgc 335 |||||||||||| ||||| | |||||||||||| Sbjct: 473 cggcggcacggcggccgcggccgccgccgccgc 441
>dbj|AK101483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041F21, full insert sequence Length = 2990 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgcc 333 ||||||||||||||||||||| Sbjct: 101 gccgccgcagacgccgccgcc 81
>emb|AJ332148.1|HSA332148 Homo sapiens genomic sequence surrounding NotI site, clone NL1-VE21RS Length = 849 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatctt 341 |||||||| | |||||||||||||||||| Sbjct: 181 gccgccgccgccgccgccgccgccatctt 153
>dbj|AK098862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O09, full insert sequence Length = 1245 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgc 335 |||||||||||| |||||||||||| Sbjct: 165 cggccgccgcagccgccgccgccgc 141
>dbj|AK066726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K22, full insert sequence Length = 3056 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgcc 333 ||||||||||||||||||||| Sbjct: 102 gccgccgcagacgccgccgcc 82
>dbj|AK061788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E12, full insert sequence Length = 1244 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgc 335 |||||||||||| |||||||||||| Sbjct: 182 cggccgccgcagccgccgccgccgc 158
>dbj|AK059523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C09, full insert sequence Length = 1515 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 cgccgcagacgccgccgccgccatc 339 |||||| |||||||||||||||||| Sbjct: 74 cgccgccgacgccgccgccgccatc 50
>gb|U89995.1|HSU89995 Human DNA binding protein FKHL15 (FKHL15) mRNA, complete cds Length = 3510 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccatctt 341 |||||||| | |||||||||||||||||| Sbjct: 1211 gccgccgccgccgccgccgccgccatctt 1239
>emb|AL929249.15| Mouse DNA sequence from clone RP23-273G23 on chromosome 2, complete sequence Length = 194209 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 310 acggccgccgcagacgccgccgccgccat 338 ||||||||||| | ||||||||||||||| Sbjct: 31821 acggccgccgcggccgccgccgccgccat 31793
>gb|AC147596.5| Gallus gallus BAC clone CH261-29A2 from chromosome unknown, complete sequence Length = 190789 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 305 gcggcacggccgccgcagacgccgccgcc 333 |||||||||||||||| | |||||||||| Sbjct: 182225 gcggcacggccgccgccgccgccgccgcc 182253
>emb|AL109769.5|CNS018OY Human chromosome 14 DNA sequence BAC R-501E21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161938 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 308 gcacggccgccgcagacgccgccgccgcc 336 ||||||||||||| | ||||||||||||| Sbjct: 62745 gcacggccgccgccgccgccgccgccgcc 62717
>dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1, complete cds Length = 2622 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 303 cggcggcacggccgccgcagacgccgccgccgc 335 |||||||||||| ||||| | |||||||||||| Sbjct: 365 cggcggcacggcggccgcggccgccgccgccgc 333
>ref|XM_529827.1| PREDICTED: Pan troglodytes LOC454514 (LOC454514), mRNA Length = 3345 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 2708 gccgccgcagtcgccgccgccgcc 2731
>ref|NM_187944.1| Oryza sativa (japonica cultivar-group), Ozsa8364 predicted mRNA Length = 2949 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 1488 gccgccgccgccgccgccgccgccatct 1515
>ref|NM_189693.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1674 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 309 cacggccgccgcagacgccgccgccgcc 336 |||||||||||| | ||||||||||||| Sbjct: 6 cacggccgccgccgccgccgccgccgcc 33
>ref|XM_523416.1| PREDICTED: Pan troglodytes AT-binding transcription factor 1 (LOC468024), mRNA Length = 13500 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 1865 gccgccgcagccgccgccgccgcc 1842
>ref|XM_480994.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 121 gccgccgcagccgccgccgccgcc 144
>ref|XM_508269.1| PREDICTED: Pan troglodytes similar to oviductin protease (LOC451006), mRNA Length = 1885 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 tgtgatgaggagtctgctcc 360 |||||||||||||||||||| Sbjct: 1794 tgtgatgaggagtctgctcc 1775
>ref|NM_184910.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2067 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 1959 ggccgccgcagtcgccgccgccgc 1936
>ref|XM_467603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1363 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgcca 337 ||||||| |||||||||||||||| Sbjct: 143 ccgccgccgacgccgccgccgcca 120
>ref|XM_506952.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0072H09.24 mRNA Length = 1710 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgcca 337 ||||||| |||||||||||||||| Sbjct: 640 ccgccgccgacgccgccgccgcca 617
>ref|XM_466348.1| Oryza sativa (japonica cultivar-group), mRNA Length = 621 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ccgcagacgccgccgccgcc 336 |||||||||||||||||||| Sbjct: 564 ccgcagacgccgccgccgcc 583
>ref|XM_464109.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1278 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 cacggccgccgcagacgccgccgccgcc 336 ||||||||||| ||||||||||||||| Sbjct: 297 cacggccgccggcgacgccgccgccgcc 270
>ref|XM_464130.1| Oryza sativa (japonica cultivar-group), mRNA Length = 441 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 cacggccgccgcagacgccgccgccgcc 336 |||||||||||| | ||||||||||||| Sbjct: 390 cacggccgccgccgccgccgccgccgcc 363
>ref|XM_527396.1| PREDICTED: Pan troglodytes similar to transcription factor RUNX2/CBFA1 (LOC472017), mRNA Length = 3006 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 629 gccgccgcagccgccgccgccgcc 606 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 611 gccgccgcagccgccgccgccgcc 588
>ref|XM_525967.1| PREDICTED: Pan troglodytes homeo box D13 (LOC470586), mRNA Length = 1008 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 176 gccgccgcagccgccgccgccgcc 153
>ref|NM_006885.2| Homo sapiens AT-binding transcription factor 1 (ATBF1), mRNA Length = 11893 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 3015 gccgccgcagccgccgccgccgcc 2992
>ref|XM_513713.1| PREDICTED: Pan troglodytes similar to FLJ00183 protein (LOC457195), mRNA Length = 1544 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatcttgtg 344 |||||||| | ||||||||||||||| ||||| Sbjct: 656 gccgccgccgccgccgccgccgccattttgtg 625
>gb|AC104882.30| Mus musculus chromosome 8, clone RP23-401L9, complete sequence Length = 209525 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 51698 ggccgccgcagccgccgccgccgc 51721
>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0109A13, complete sequence Length = 134258 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ccgcagacgccgccgccgcc 336 |||||||||||||||||||| Sbjct: 29989 ccgcagacgccgccgccgcc 29970
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ccgcagacgccgccgccgcc 336 |||||||||||||||||||| Sbjct: 139061 ccgcagacgccgccgccgcc 139042
>gb|BT016829.1| Zea mays clone Contig662 mRNA sequence Length = 1064 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cgcagacgccgccgccgcca 337 |||||||||||||||||||| Sbjct: 124 cgcagacgccgccgccgcca 105
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgcc 333 |||||||||||||||||||| Sbjct: 65078 ccgccgcagacgccgccgcc 65059
>gb|AY023266.1| Oryza sativa microsatellite MRG5591 containing (GGC)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 124 gccgccgccgccgccgccgccgccatct 97
>gb|AY023261.1| Oryza sativa microsatellite MRG5586 containing (GGC)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 cacggccgccgcagacgccgccgccgcc 336 |||||||||||| | ||||||||||||| Sbjct: 128 cacggccgccgccgccgccgccgccgcc 101
>gb|AY022810.1| Oryza sativa microsatellite MRG5135 containing (CGC)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 102 gccgccgccgccgccgccgccgccatct 129
>gb|AC004649.1| Homo sapiens chromosome 5, P1 clone 603E12 (LBNL H26), complete sequence Length = 24102 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 11886 gccgccgcagccgccgccgccgcc 11863
>gb|AY338244.1| Euprosthenops sp. NNP-2003 dragline fibroin mRNA, partial cds Length = 852 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 190 gccgccgcagccgccgccgccgcc 213
>gb|AY731553.1| Arachis hypogaea clone PM738 microsatellite sequence Length = 300 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||| ||||||||||||||| Sbjct: 100 gccgccgccgacgccgccgccgcc 123
>gb|AY731524.1| Arachis hypogaea clone PM704 microsatellite sequence Length = 350 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 230 gccgccgcagccgccgccgccgcc 207
>gb|BC080788.1| Mus musculus eukaryotic translation initiation factor 3, subunit 1 alpha, mRNA (cDNA clone MGC:91206 IMAGE:4166214), complete cds Length = 1804 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 70 gccgccgccgccgccgccgccgccatct 43
>ref|XM_597385.2| PREDICTED: Bos taurus similar to biogenesis of lysosome-related organelles complex-1, subunit 2 isoform 1, transcript variant 1 (LOC519172), mRNA Length = 894 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccgccat 338 |||||||||| | ||||||||||||||| Sbjct: 35 cggccgccgccgccgccgccgccgccat 8
>gb|AC146718.2| Oryza sativa chromosome 3 B1130H05 genomic sequence, complete sequence Length = 49565 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 311 cggccgccgcagacgccgccgccg 334 |||||||||||| ||||||||||| Sbjct: 14080 cggccgccgcagccgccgccgccg 14057
>ref|XM_616100.2| PREDICTED: Bos taurus similar to T-box 2 (LOC535982), mRNA Length = 3380 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 548 gccgccgcagccgccgccgccgcc 525
>ref|NM_001024630.1| Homo sapiens runt-related transcription factor 2 (RUNX2), transcript variant 1, mRNA Length = 5564 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 467 gccgccgcagccgccgccgccgcc 444 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 449 gccgccgcagccgccgccgccgcc 426
>ref|NM_004348.3| Homo sapiens runt-related transcription factor 2 (RUNX2), transcript variant 3, mRNA Length = 5720 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 615 gccgccgcagccgccgccgccgcc 592 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 597 gccgccgcagccgccgccgccgcc 574
>ref|NM_001015051.1| Homo sapiens runt-related transcription factor 2 (RUNX2), transcript variant 2, mRNA Length = 5498 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 467 gccgccgcagccgccgccgccgcc 444 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 449 gccgccgcagccgccgccgccgcc 426
>gb|AY640308.1| Gallus gallus homeodomain transcription factor DLX6 (DLX6) mRNA, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 199 gccgccgcagccgccgccgccgcc 222
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 160250 gccgccgcagccgccgccgccgcc 160273
>ref|NM_016573.2| Homo sapiens GEM interacting protein (GMIP), mRNA Length = 3532 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 38 gccgccgcagccgccgccgccgcc 15
>ref|XM_595425.2| PREDICTED: Bos taurus similar to trans-acting transcription factor 9 (LOC517257), mRNA Length = 2172 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 2123 gccgccgcagccgccgccgccgcc 2100
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgccgccgcgctacgacgcg 243 |||||||||||||||||||| Sbjct: 653434 tgccgccgcgctacgacgcg 653415
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgcc 333 |||||||||||||||||||| Sbjct: 114310 ccgccgcagacgccgccgcc 114291
>ref|NM_205842.1| Homo sapiens NCK-associated protein 1 (NCKAP1), transcript variant 2, mRNA Length = 4637 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 ||||||| |||||||||||||||| Sbjct: 49 gccgccggagacgccgccgccgcc 72
>ref|NM_013436.3| Homo sapiens NCK-associated protein 1 (NCKAP1), transcript variant 1, mRNA Length = 4619 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 ||||||| |||||||||||||||| Sbjct: 49 gccgccggagacgccgccgccgcc 72
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 31045 gccgccgcagccgccgccgccgcc 31068
>gb|AC163746.5| Mus musculus BAC clone RP23-394B5 from chromosome 17, complete sequence Length = 199852 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 119524 gccgccgccgccgccgccgccgccatct 119497
>gb|AY559045.1| Oryza sativa homeodomain leucine zipper protein 16 (hox16) mRNA, complete cds Length = 1472 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ccgccgcagacgccgccgccgcca 337 ||||||| |||||||||||||||| Sbjct: 229 ccgccgccgacgccgccgccgcca 206
>ref|XM_974895.1| PREDICTED: Mus musculus echinoderm microtubule associated protein like 5, transcript variant 5 (Eml5), mRNA Length = 10137 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 328 ggccgccgcagccgccgccgccgc 305
>ref|XM_911617.2| PREDICTED: Mus musculus echinoderm microtubule associated protein like 5, transcript variant 7 (Eml5), mRNA Length = 10114 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 307 ggccgccgcagccgccgccgccgc 284
>ref|XM_286452.6| PREDICTED: Mus musculus echinoderm microtubule associated protein like 5, transcript variant 1 (Eml5), mRNA Length = 10136 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 328 ggccgccgcagccgccgccgccgc 305
>ref|XM_544656.2| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 1 (eIF-3 alpha) (LOC487532), mRNA Length = 3142 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 144 gccgccgccgccgccgccgccgccatct 117
>ref|XM_001001306.1| PREDICTED: Mus musculus hypothetical protein LOC677196 (LOC677196), mRNA Length = 501 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 365 ggccgccgcagccgccgccgccgc 342
>ref|XM_001000511.1| PREDICTED: Mus musculus hypothetical protein LOC668258 (LOC668258), mRNA Length = 501 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 365 ggccgccgcagccgccgccgccgc 342
>ref|XM_542234.2| PREDICTED: Canis familiaris similar to mastermind-like 2 (LOC485116), mRNA Length = 3872 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 1821 gccgccgcagccgccgccgccgcc 1844
>emb|AJ578527.1|EGU578527 Elaeis guineensis microsatellite DNA, clone mEgCIR0445 Length = 605 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 cggccgccgcagacgccgccgccgccat 338 |||||||||| | ||||||||||||||| Sbjct: 300 cggccgccgccgccgccgccgccgccat 327
>ref|XM_847747.1| PREDICTED: Canis familiaris similar to Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox) (LOC610284), mRNA Length = 945 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 761 gccgccgcagccgccgccgccgcc 738
>ref|XM_857443.1| PREDICTED: Canis familiaris similar to PHD finger protein 20-like 1 isoform 1, transcript variant 10 (LOC608229), mRNA Length = 2251 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||| ||||||||||||||| Sbjct: 60 gccgccgccgacgccgccgccgcc 37
>ref|XM_857255.1| PREDICTED: Canis familiaris similar to PHD finger protein 20-like 1 isoform 1, transcript variant 3 (LOC608229), mRNA Length = 3244 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||| ||||||||||||||| Sbjct: 60 gccgccgccgacgccgccgccgcc 37
>ref|XM_845703.1| PREDICTED: Canis familiaris similar to PHD finger protein 20-like 1 isoform 1, transcript variant 2 (LOC608229), mRNA Length = 5414 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||| ||||||||||||||| Sbjct: 60 gccgccgccgacgccgccgccgcc 37
>ref|XM_532273.2| PREDICTED: Canis familiaris similar to t-complex-associated-testis-expressed 3 (LOC475038), mRNA Length = 945 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgc 332 |||||||||||||||||||| Sbjct: 51 gccgccgcagacgccgccgc 70
>gb|AC122273.4| Mus musculus BAC clone RP23-228B2 from 9, complete sequence Length = 196627 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 cgccgccgccgccatcttgt 343 |||||||||||||||||||| Sbjct: 68145 cgccgccgccgccatcttgt 68164
>ref|XM_850616.1| PREDICTED: Canis familiaris similar to NipSnap2 protein (Glioblastoma amplified sequence), transcript variant 3 (LOC479700), mRNA Length = 2165 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccg 331 |||||||||||||||||||| Sbjct: 24 ggccgccgcagacgccgccg 5
>ref|XM_850589.1| PREDICTED: Canis familiaris similar to NipSnap2 protein (Glioblastoma amplified sequence), transcript variant 2 (LOC479700), mRNA Length = 1994 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccg 331 |||||||||||||||||||| Sbjct: 24 ggccgccgcagacgccgccg 5
>ref|XM_536828.2| PREDICTED: Canis familiaris similar to NipSnap2 protein (Glioblastoma amplified sequence), transcript variant 1 (LOC479700), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccg 331 |||||||||||||||||||| Sbjct: 24 ggccgccgcagacgccgccg 5
>ref|XM_536770.2| PREDICTED: Canis familiaris similar to ATM/ATR-Substrate Chk2-Interacting Zn2+-finger protein (LOC479635), mRNA Length = 3917 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 1114 gccgccgcagccgccgccgccgcc 1137
>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence Length = 244237 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 197638 gccgccgccgccgccgccgccgccatct 197665
>ref|XM_546222.2| PREDICTED: Canis familiaris hypothetical LOC489106 (LOC489106), mRNA Length = 3238 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||| ||||||||||||||| Sbjct: 291 gccgccgccgacgccgccgccgcc 314
>gb|AC073635.8| Homo sapiens BAC clone RP11-275G11 from 7, complete sequence Length = 130822 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 acacctctgatcctaaccta 164 |||||||||||||||||||| Sbjct: 39939 acacctctgatcctaaccta 39958
>gb|AC096909.10| Rattus norvegicus 8 BAC CH230-88B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 241078 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 cgccgccgccgccatcttgt 343 |||||||||||||||||||| Sbjct: 128391 cgccgccgccgccatcttgt 128410
>emb|AL096865.28|HSJ244F24 Human DNA sequence from clone RP1-244F24 on chromosome 6p12.3-21.2 Contains the 5' end of the RUNX2 gene for runt-related transcription factor 2, the 3' end of the SUPT3H gene for suppressor of Ty 3 homolog (S. cerevisiae) and three CpG islands, complete sequence Length = 125479 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 27487 gccgccgcagccgccgccgccgcc 27510 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 27469 gccgccgcagccgccgccgccgcc 27492
>emb|AL049745.9|HSJ654H19 Human DNA sequence from clone RP4-654H19 on chromosome 1p31.1-33 Contains the 5' end of the gene for likely ortholog of mouse Gli-similar 1 Kruppel-like zinc finger (Glia1) (FLJ36155), a novel gene (FLJ10407), a ribosomal protein L37 (RPL37) pseudogene and a CpG island, complete sequence Length = 117493 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 102836 gccgccgcagccgccgccgccgcc 102813
>ref|NM_001030338.1| Gallus gallus iroquois homeobox protein 1 (IRX1), mRNA Length = 1404 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 97 gccgccgcagccgccgccgccgcc 120
>emb|X12540.1|ZMSOD3 Maize mRNA for superoxide dismutase-3 isoenzyme (EC 1.15.1.1) Length = 1038 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cgcagacgccgccgccgcca 337 |||||||||||||||||||| Sbjct: 132 cgcagacgccgccgccgcca 113
>gb|AC156546.7| Mus musculus chromosome 18, clone RP23-131O22, complete sequence Length = 209678 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 98024 gccgccgccgccgccgccgccgccatct 97997
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgccgccgcgctacgacgcg 243 |||||||||||||||||||| Sbjct: 1972549 tgccgccgcgctacgacgcg 1972530
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 atggagctggccgcagaagagggc 395 |||||||||||||| ||||||||| Sbjct: 61267 atggagctggccgccgaagagggc 61244
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ccgcagacgccgccgccgcc 336 |||||||||||||||||||| Sbjct: 13101 ccgcagacgccgccgccgcc 13082
>emb|AJ238354.1|GGA238354 Gallus gallus mRNA for iroquois homologue-1 Length = 1404 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 97 gccgccgcagccgccgccgccgcc 120
>emb|CR859822.1| Pongo pygmaeus mRNA; cDNA DKFZp469N0734 (from clone DKFZp469N0734) Length = 1745 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgccatct 340 |||||||| | ||||||||||||||||| Sbjct: 46 gccgccgccgccgccgccgccgccatct 19
>gb|AC011458.7| Homo sapiens chromosome 19 clone CTC-412M14, complete sequence Length = 105238 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 22964 gccgccgcagccgccgccgccgcc 22987
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgc 332 |||||||||||||||||||| Sbjct: 2725218 gccgccgcagacgccgccgc 2725237
>gb|AE005750.1| Caulobacter crescentus CB15 section 76 of 359 of the complete genome Length = 11605 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||| |||||||||||||| Sbjct: 10361 ggccgccgccgacgccgccgccgc 10338
>gb|AC010048.5| Drosophila melanogaster 3L BAC RP98-5B23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175316 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 aagctggctgcacacggcca 301 |||||||||||||||||||| Sbjct: 115985 aagctggctgcacacggcca 116004
>gb|DQ417199.1| Oryza sativa (japonica cultivar-group) putative EREBP transcription factor (EREBP) mRNA, complete cds Length = 1445 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 77 ggccgccgcagccgccgccgccgc 54
>tpg|BK000876.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M270, complete sequence Length = 9579 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccgccgcagacgccgccgcc 333 |||||||||||||||||||| Sbjct: 4867 ccgccgcagacgccgccgcc 4886
>tpg|BK000871.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M282, complete sequence Length = 10736 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 gccgcagacgccgccgccgc 335 |||||||||||||||||||| Sbjct: 5701 gccgcagacgccgccgccgc 5682
>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome unknown, complete sequence Length = 199332 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 145094 gccgccgcagccgccgccgccgcc 145071
>gb|AF364176.1| Oryza sativa putative EREBP-type transcription factor mRNA, complete cds Length = 1584 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 151 ggccgccgcagccgccgccgccgc 128
>gb|AC098851.5| Homo sapiens BAC clone RP13-574L22 from 7, complete sequence Length = 161470 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 acacctctgatcctaaccta 164 |||||||||||||||||||| Sbjct: 146187 acacctctgatcctaaccta 146206
>gb|AC015804.14| Homo sapiens chromosome 17, clone RP11-637C24, complete sequence Length = 200452 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 140599 gccgccgcagccgccgccgccgcc 140622
>ref|XM_945371.1| PREDICTED: Homo sapiens hypothetical protein LOC652267 (LOC652267), mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 644 gccgccgcagccgccgccgccgcc 667
>ref|XM_932859.1| PREDICTED: Homo sapiens hypothetical protein LOC645379 (LOC645379), mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 644 gccgccgcagccgccgccgccgcc 667
>gb|AC157496.3| Pan troglodytes BAC clone CH251-564E6 from chromosome unknown, complete sequence Length = 213433 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 74751 gccgccgcagccgccgccgccgcc 74728
>dbj|AK081694.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130068M19 product:hypothetical G-protein beta WD-40 repeats containing protein, full insert sequence Length = 3005 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 329 ggccgccgcagccgccgccgccgc 306
>gb|AC034220.5| Homo sapiens chromosome 5 clone CTD-2049H4, complete sequence Length = 146797 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gccgccgcagacgccgccgccgcc 336 |||||||||| ||||||||||||| Sbjct: 81228 gccgccgcagccgccgccgccgcc 81205
>gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome 12, complete sequence Length = 243976 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ggccgccgcagacgccgccgccgc 335 ||||||||||| |||||||||||| Sbjct: 41027 ggccgccgcagccgccgccgccgc 41004 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,993,620 Number of Sequences: 3902068 Number of extensions: 4993620 Number of successful extensions: 488631 Number of sequences better than 10.0: 322 Number of HSP's better than 10.0 without gapping: 359 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 478262 Number of HSP's gapped (non-prelim): 10357 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
