>gb|AF117889.1|AF117889 Avena fatua 40S ribosomal protein S3A mRNA, partial cds
          Length = 382

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 35/36 (97%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                               
Query: 115 atcagccatcaaaactgactaca-aagttcacgaca 149
           ||||||||||||||||||||||| ||||||||||||
Sbjct: 365 atcagccatcaaaactgactacagaagttcacgaca 330

>gb|AC160763.3| Mus musculus BAC clone RP23-238A4 from chromosome 17, complete
            sequence
          Length = 215626

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 102  aagtactcaagaaatcagccatcaa 126
            |||||||||||||| ||||||||||
Sbjct: 3171 aagtactcaagaaaccagccatcaa 3195

>gb|AC154561.2| Mus musculus BAC clone RP23-400M17 from chromosome 17, complete
             sequence
          Length = 191047

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 102   aagtactcaagaaatcagccatcaa 126
             |||||||||||||| ||||||||||
Sbjct: 73532 aagtactcaagaaaccagccatcaa 73508

>emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chromosome 6, complete
             sequence
          Length = 139086

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ccatcaaaactgactacaaa 139
             ||||||||||||||||||||
Sbjct: 50732 ccatcaaaactgactacaaa 50751

>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
          Length = 199075

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ataaactaaatatttagttt 27
             ||||||||||||||||||||
Sbjct: 64933 ataaactaaatatttagttt 64952



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     taaactaaatatttagttt 27
             |||||||||||||||||||
Sbjct: 64953 taaactaaatatttagttt 64935

>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project)
          Length = 94301

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ataaactaaatatttagttt 27
             ||||||||||||||||||||
Sbjct: 45652 ataaactaaatatttagttt 45671



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     taaactaaatatttagttt 27
             |||||||||||||||||||
Sbjct: 45672 taaactaaatatttagttt 45654

>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence
          Length = 197719

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     ggaataaactaaatattta 23
             |||||||||||||||||||
Sbjct: 17244 ggaataaactaaatattta 17226

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 29      aactcataacctccatccc 47
               |||||||||||||||||||
Sbjct: 1207845 aactcataacctccatccc 1207863

>emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chromosome 10 Contains part
              of a novel gene (DKFZp761L0424) (KIAA1217) and three novel
              genes (FLJ11983 FLJ14139), complete sequence
          Length = 190429

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     gaacaaaacaagatagttg 77
              |||||||||||||||||||
Sbjct: 171530 gaacaaaacaagatagttg 171512

>emb|AL133335.29| Human DNA sequence from clone RP5-1162C3 on chromosome 20 Contains the
             PFDN4 gene for prefoldin 4 and two CpG islands, complete
             sequence
          Length = 101961

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     taaactaaatatttagttt 27
             |||||||||||||||||||
Sbjct: 26522 taaactaaatatttagttt 26540

>gb|AC021076.5| Homo sapiens chromosome 5 clone CTB-166J1, complete sequence
          Length = 92068

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 124   caaaactgactacaaagtt 142
             |||||||||||||||||||
Sbjct: 33192 caaaactgactacaaagtt 33174

>gb|AC100799.2| Homo sapiens chromosome 8, clone RP11-1082F24, complete sequence
          Length = 194149

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   tcaaaactgactacaaagt 141
             |||||||||||||||||||
Sbjct: 71427 tcaaaactgactacaaagt 71445

>emb|BX936338.11| Mouse DNA sequence from clone RP23-402O17 on chromosome 4, complete
             sequence
          Length = 66155

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 31    ctcataacctccatcccga 49
             |||||||||||||||||||
Sbjct: 59608 ctcataacctccatcccga 59626

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 7        aataaactaaatatttagt 25
                |||||||||||||||||||
Sbjct: 11579320 aataaactaaatatttagt 11579302

>dbj|AP001724.1| Homo sapiens genomic DNA, chromosome 21q, section 68/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 107    ctcaagaaatcagccatca 125
              |||||||||||||||||||
Sbjct: 329782 ctcaagaaatcagccatca 329800

>dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0414E10
          Length = 141760

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     aataaactaaatatttagt 25
             |||||||||||||||||||
Sbjct: 57206 aataaactaaatatttagt 57188

>dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, map 22, complete
             sequences
          Length = 165662

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   ctcaagaaatcagccatca 125
             |||||||||||||||||||
Sbjct: 88080 ctcaagaaatcagccatca 88098

>emb|AL935038.9| Zebrafish DNA sequence from clone CH211-187I23 in linkage group 18,
             complete sequence
          Length = 139077

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 23    agtttcaactcataacctccatc 45
             |||||||||||| ||||||||||
Sbjct: 78550 agtttcaactcaaaacctccatc 78572

>dbj|AP004372.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-651K21, complete
             sequence
          Length = 197360

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    taacacgaacaaaacaaga 71
             |||||||||||||||||||
Sbjct: 10126 taacacgaacaaaacaaga 10144

>gb|AC102255.10| Mus musculus chromosome 18, clone RP24-182H11, complete sequence
          Length = 195275

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     ggaataaactaaatattta 23
             |||||||||||||||||||
Sbjct: 79184 ggaataaactaaatattta 79166

>dbj|AP003039.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-116B3, complete
              sequence
          Length = 152252

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     taacacgaacaaaacaaga 71
              |||||||||||||||||||
Sbjct: 128950 taacacgaacaaaacaaga 128968

>emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1, COMPLETE SEQUENCE
          Length = 122965

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 21    ttagtttcaactcataacctcca 43
             ||||||| |||||||||||||||
Sbjct: 35225 ttagtttaaactcataacctcca 35247

>emb|AL731565.17| Mouse DNA sequence from clone RP23-83D8 on chromosome 4, complete
             sequence
          Length = 185273

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    ctcataacctccatcccga 49
             |||||||||||||||||||
Sbjct: 49628 ctcataacctccatcccga 49610

>emb|AL772188.8| Mouse DNA sequence from clone RP23-143O19 on chromosome 2, complete
             sequence
          Length = 207403

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 84    ggctaggaatggcgacagaagta 106
             |||||| ||||||||||||||||
Sbjct: 92744 ggctagtaatggcgacagaagta 92722

>dbj|AP000689.1| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB795B7,
            CBR1-HLCS region
          Length = 126546

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 107  ctcaagaaatcagccatca 125
            |||||||||||||||||||
Sbjct: 1768 ctcaagaaatcagccatca 1786

>dbj|AP000688.1| Homo sapiens genomic DNA, chromosome 21q22.2, PAC clone:P27A22, CBR1-HLCS
              region
          Length = 171703

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 107    ctcaagaaatcagccatca 125
              |||||||||||||||||||
Sbjct: 144968 ctcaagaaatcagccatca 144986

>dbj|AB003151.1| Homo sapiens DNA, chromosome 21q22.2, PAC clone 25P16 complete
             sequence, encoding carbonyl reductase and carbonyl
             reductase 3 (complete cds)
          Length = 170529

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   ctcaagaaatcagccatca 125
             |||||||||||||||||||
Sbjct: 79792 ctcaagaaatcagccatca 79810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,602,625
Number of Sequences: 3902068
Number of extensions: 1602625
Number of successful extensions: 117799
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117698
Number of HSP's gapped (non-prelim): 101
length of query: 174
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 152
effective length of database: 17,147,199,772
effective search space: 2606374365344
effective search space used: 2606374365344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)