ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart20h02 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 137 bits (344), Expect = 2e-32 Identities = 66/114 (57%), Positives = 82/114 (71%), Gaps = 4/114 (3%) Frame = -3 Query: 461 PVQLTATPRCGYPDR-HVERALATGLVGRIFVRFYD-DADCAAN--WQRQWDKWTAAYPS 294 P+ LTAT RCGYP HV RALATG+ R+ VR Y+ D C N W+ WDKWTAAYP+ Sbjct: 185 PLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQNLGWEGSWDKWTAAYPA 244 Query: 293 AQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 132 + Y+GL A ++ +VHPKN+YYGV V QK NYGG+M+W+RY DK+TNYSS Sbjct: 245 TRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 127 bits (319), Expect = 1e-29 Identities = 64/129 (49%), Positives = 82/129 (63%), Gaps = 8/129 (6%) Frame = -3 Query: 476 FRGRTPVQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANW------QRQWDK 315 +R RTPV+LTAT RC +PD +++AL T L RI VRFYDDA C+ N QW+K Sbjct: 176 YRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDATCSYNHAGLAGVMAQWNK 235 Query: 314 WTAAYPSAQIYLGLPASE--QKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 141 WTA YP + +YLGL A+ K V K LYY ++ VQKA NYGG+M+W+R+ DK+T Sbjct: 236 WTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTG 295 Query: 140 YSSYAIQWA 114 Y WA Sbjct: 296 YGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 120 bits (302), Expect = 1e-27 Identities = 54/115 (46%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Frame = -3 Query: 476 FRGRTPVQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKWTAAYP 297 +RGR V LTAT RC YPD +E+ALATG+ RI VR + D C + + W+KW AA+P Sbjct: 173 YRGRVGVLLTATTRCSYPDHRLEKALATGVFARIHVRMFGDEQCTMSPRYSWEKWAAAFP 232 Query: 296 SAQIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 135 +++Y+GL AS EQ ++ K+LYY ++Q V+ NYGG+ +++RY DK+ NY+ Sbjct: 233 GSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 90.5 bits (223), Expect = 2e-18 Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 8/117 (6%) Frame = -3 Query: 458 VQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADC------AANWQRQWDKWTAAYP 297 V LTA P+C +PDR++ AL TGL ++V+FY++ C N W++WT + Sbjct: 177 VYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSIN 236 Query: 296 SAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 132 + +I+LGLPA+ + GYV P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 237 AGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 85.9 bits (211), Expect = 5e-17 Identities = 42/114 (36%), Positives = 74/114 (64%), Gaps = 7/114 (6%) Frame = -3 Query: 452 LTATPRCGYPDRHVERALATGLVGRIFVRFYDDADC-----AANWQRQWDKWTAAYPSAQ 288 LTA P+C +PD+ + AL TGL ++V+FY++ +C + N++R+W++WT + P+ + Sbjct: 176 LTAAPQCPFPDKLLNGALQTGLFDYVWVQFYNNPECEFMSNSENFKRRWNQWT-SIPAKK 234 Query: 287 IYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 132 +Y+GLPA++ GY+ + L V+ ++ ++ YGGVM+W R D + YSS Sbjct: 235 LYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 84.0 bits (206), Expect = 2e-16 Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 8/122 (6%) Frame = -3 Query: 473 RGRTPVQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADC------AANWQRQWDKW 312 RGR V LTA P+C +PD+ AL TGL ++V+FY++ C N W++W Sbjct: 175 RGRK-VYLTAAPQCPFPDKVPGTALNTGLFDYVWVQFYNNPPCQYSSGNTNNLLNSWNRW 233 Query: 311 TAAYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNY 138 T++ S ++GLPAS G++ L ++ V++++ YGGVM+W +Y D ++ Y Sbjct: 234 TSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGY 293 Query: 137 SS 132 SS Sbjct: 294 SS 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 83.2 bits (204), Expect = 3e-16 Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 9/118 (7%) Frame = -3 Query: 458 VQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADC------AANWQRQWDKWTAAYP 297 V L+A P+C YPD H++ A+ TGL ++V+FY++ C N W++WT++ Sbjct: 171 VYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNLVNAWNQWTSS-Q 229 Query: 296 SAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 132 + Q++LG+PAS+ G + L V+ ++ + YGGVM+W+R+ D ++ YS+ Sbjct: 230 AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 81.3 bits (199), Expect = 1e-15 Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 8/122 (6%) Frame = -3 Query: 473 RGRTPVQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADCA------ANWQRQWDKW 312 RGR + LT P+C +PDR + AL T ++++FY++ C+ N W+KW Sbjct: 176 RGRK-IYLTGAPQCPFPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKW 234 Query: 311 TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNY 138 T + + + +LGLPA+ + G Y+ P L ++ ++K+ YGGVM+W ++ D + Y Sbjct: 235 TTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGY 294 Query: 137 SS 132 SS Sbjct: 295 SS 296
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 80.9 bits (198), Expect = 2e-15 Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 8/110 (7%) Frame = -3 Query: 458 VQLTATPRCGYPDRHVERALATGLVGRIFVRFYDD-----ADCAANWQRQWDKWTAAYPS 294 V L+A P+C PD H++ A+ TGL ++V+FY++ AD A N W++WT A+P+ Sbjct: 172 VILSAAPQCPIPDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWT-AFPT 230 Query: 293 AQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 153 +++Y+GLPA+ + G++ L V+ ++ ++NYGGVM+W + D Sbjct: 231 SKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 77.4 bits (189), Expect = 2e-14 Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 8/118 (6%) Frame = -3 Query: 452 LTATPRCGYPDRHVERALATGLVGRIFVRFYDDADC------AANWQRQWDKWTAAYPSA 291 LTA P+C PD H++ A+ TGL ++V+FY++ C + W++WT++ + Sbjct: 179 LTAAPQCPIPDAHLDTAIKTGLFDIVWVQFYNNPPCQYSSGNTNDLISSWNQWTSS-QAK 237 Query: 290 QIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 123 Q++LG+PAS G++ L V+ ++ ++ YGGVM+W+R+ D ++ YS I Sbjct: 238 QLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 76.3 bits (186), Expect = 4e-14 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 7/120 (5%) Frame = -3 Query: 470 GRTPVQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADC-----AANWQRQWDKWTA 306 G+ V L+A P+C PD + A+ATGL ++V+FY++ C A N W++WT Sbjct: 171 GQKTVYLSAAPQCPLPDASLSTAIATGLFDYVWVQFYNNPPCQYDTSADNLLSSWNQWTT 230 Query: 305 AYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 132 + QI+LGLPAS G++ L V+ ++ +A YGGVM+W + D + YSS Sbjct: 231 VQAN-QIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 74.7 bits (182), Expect = 1e-13 Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 8/123 (6%) Frame = -3 Query: 476 FRGRTPVQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADC------AANWQRQWDK 315 F + V LTA P+C +PD + AL+TGL ++V+FY++ C A N + W++ Sbjct: 166 FSQQRKVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQFYNNPPCQYSGGSADNLKNYWNQ 225 Query: 314 WTAAYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 141 W A + +I+LGLPA++ G++ L V+ ++ + YGGVM+W ++ D Sbjct: 226 WN-AIQAGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NG 282 Query: 140 YSS 132 YSS Sbjct: 283 YSS 285
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 66.6 bits (161), Expect = 3e-11 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 12/124 (9%) Frame = -3 Query: 452 LTATPRCGYPDRHVERALATGLVGRIFVRFYDDADC---AANWQR---QWDKWT-AAYP- 297 L+A P C PD +++ A+ T IFVRFY+D C N QR W WT + YP Sbjct: 184 LSAAPGCLSPDEYLDNAIQTRHFDYIFVRFYNDRSCQYSTGNIQRIRNAWLSWTKSVYPR 243 Query: 296 SAQIYLGLPASEQKV---GYVHPKNLYYGVIQVV-QKAANYGGVMVWERYEDKRTNYSSY 129 ++L LPAS+ GY+ P L V+ + Y G+ +W R DK T YS+ Sbjct: 244 DKNLFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTN 303 Query: 128 AIQW 117 I++ Sbjct: 304 IIRY 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 56.6 bits (135), Expect = 3e-08 Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 8/110 (7%) Frame = -3 Query: 470 GRTPVQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKW------T 309 G L+A P+C YPD V L + F++FY++ C+ + Q WD W Sbjct: 178 GTKQYYLSAAPQCPYPDASVGDLLENADIDFAFIQFYNNY-CSVSGQFNWDTWLTYAQTV 236 Query: 308 AAYPSAQIYLGLP--ASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWE 165 + + +++LGLP AS GY+ +L I + ++++GG+ +W+ Sbjct: 237 SPNKNIKLFLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWD 286
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 53.9 bits (128), Expect = 2e-07 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 4/106 (3%) Frame = -3 Query: 470 GRTPVQLTATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKWT--AAYP 297 G L+A P+C YPD V ++ + F++FY++ C+ N Q W+ W+ A Sbjct: 168 GTKSYYLSAAPQCPYPDESVGDLMSQVDLDFAFIQFYNNY-CSLNQQFNWNSWSNYARGK 226 Query: 296 SAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 165 S ++YLGLP S G+V + V+ ++ +++GG+ +W+ Sbjct: 227 SIKLYLGLPGSSSSAGSGFVGLSTV-QRVVASIKGDSSFGGISIWD 271
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 52.4 bits (124), Expect = 6e-07 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 20/116 (17%) Frame = -3 Query: 452 LTATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANWQRQW-----------DKWT- 309 ++A P+C PD+++ A++ IF++FY++ C+A ++W D W Sbjct: 203 ISAAPQCIMPDKYLSHAISNSAFDFIFIQFYNNPSCSA---KRWVTNPKSVTYTVDDWVK 259 Query: 308 ----AAYPSAQIYLGLPASEQ---KVGYVHPKNLYYGVIQVVQK-AANYGGVMVWE 165 + P A++++GLPAS+ K Y+ P V + K + +GG+MVWE Sbjct: 260 YIRKSGNPLAKLFIGLPASKSAAAKEDYLTPGEATKIVSTYMAKYPSTFGGMMVWE 315
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 51.6 bits (122), Expect = 1e-06 Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 5/101 (4%) Frame = -3 Query: 452 LTATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKWTAAYPSA-----Q 288 L+A P+C YPD + L+ + F++FY++ C+ N Q +D W+ SA + Sbjct: 181 LSAAPQCPYPDASLGDLLSKVPLDFAFIQFYNNY-CSINGQFNYDTWSKFADSAPNKNIK 239 Query: 287 IYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWE 165 +++G+PA+ GYV L I+ ++ +++ GV +W+ Sbjct: 240 LFVGVPATSNIAGYVDTSKL-SSAIEEIKCDSHFAGVSLWD 279
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 46.2 bits (108), Expect = 4e-05 Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Frame = -3 Query: 452 LTATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKW------TAAYPSA 291 L A P+C YPD V L + +F++FY++ + WD W + + Sbjct: 185 LGAAPQCPYPDASVGPLLKQSEIDFVFIQFYNNYCNLGSSSFNWDTWLNYAETDSPNKNI 244 Query: 290 QIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 165 ++++G+PAS + GY P + + + + +GG+ +W+ Sbjct: 245 KLFVGVPASSRAAGSGYNDPSAVSQYLTSDILNSKYFGGISMWD 288
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 42.7 bits (99), Expect = 5e-04 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%) Frame = -3 Query: 446 ATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANWQR----QWDKW---TAAYPSAQ 288 A P+C +PD + L + + V+FY++ C+A WD W T+ + + Sbjct: 192 AAPQCPFPDAILGSVLNSASFDYVNVQFYNNY-CSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 287 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 165 I +P S G YV L V + K ++YGGV VW+ Sbjct: 251 IMFTVPGSSTAAGSGYVPMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 41.2 bits (95), Expect = 0.001 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%) Frame = -3 Query: 446 ATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANWQR----QWDKW---TAAYPSAQ 288 A P+C +PD + L + + V+FY++ C+A WD W T+ + + Sbjct: 192 AAPQCPFPDAILGSVLNSASFDYVNVQFYNNY-CSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 287 IYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 165 I +P S GYV L V + + ++YGGV VW+ Sbjct: 251 IMFTIPGSPTAAGSGYVPMSTLQTIVPSLASEYSSYGGVSVWD 293
>CHI1_RHINI (P29025) Chitinase 1 precursor (EC 3.2.1.14)| Length = 493 Score = 33.5 bits (75), Expect = 0.29 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 9/103 (8%) Frame = -3 Query: 446 ATPRCGYPDRHVERALATGLVGRIFVRFYDDADCAANWQ-------RQWDKWTAAYPSAQ 288 A P+C +PD + + + + V+FY++ A+ W K + + + Sbjct: 188 AAPQCPFPDAILGSVIDAVGLDFVNVQFYNNVCSVASGSSFNFDVWNDWAKNKSPNKNIK 247 Query: 287 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 165 + L +P S G Y L V V+ + +++GGV VW+ Sbjct: 248 VMLTVPGSSTAAGSGYASIAELGPIVSSVISQYSSFGGVSVWD 290
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.4 bits (67), Expect = 2.5 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = -2 Query: 375 LCQVXXXXXXXRQLAEAVGQVDGGVSVGADLPRAAGVRAEGRL---RSSKEPLLRRHTGG 205 LC L +A + GG + G + R A R+ RSS P RR GG Sbjct: 984 LCTDSLPETDDSLLCDAGTAISGGKAEG-EKGRRRSSPARSRIKQGRSSSFPGRRRPRGG 1042 Query: 204 AEGGQLWRGHGLGTLRGQADKLQQL 130 A GG RG G L+ A ++ L Sbjct: 1043 AHGG---RGRGRARLKSTASSIETL 1064
>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)| Length = 275 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 30/121 (24%) Frame = -3 Query: 413 VERALATGLVGRIFVRFYDDADCAANWQRQWDKW-------------------------- 312 V R G+V + + +DDA +++Q W+K+ Sbjct: 142 VTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKY 201 Query: 311 ----TAAYPSAQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRT 144 + YP ++ + S G + P+N ++ +++K G+ VW + + Sbjct: 202 FEMQRSNYPGGKVLVSF--STDNSGGLKPRNGFFDACSILKKQGKLHGIFVWSADDSLMS 259 Query: 143 N 141 N Sbjct: 260 N 260
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 3.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 269 ASEQKVGYVHPKNLYYGVIQVVQKA 195 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>Y590_METJA (Q58010) Hypothetical protein MJ0590| Length = 704 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -3 Query: 335 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNL 228 W R ++ +YP + +G +E KVGY KNL Sbjct: 2 WGRDYELKYISYPKSVAIIGASKTEGKVGYAIMKNL 37
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -3 Query: 239 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 117 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319
>FLGE_CAUCR (P35806) Flagellar hook protein flgE| Length = 591 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 254 PSALTPAARGRSAPTDTPPSTCPTASASW 340 P+A+T + G APT TPP+ P +W Sbjct: 404 PTAITIKSSGYIAPTVTPPAVQPPTPPTW 432
>WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824| Length = 506 Score = 28.5 bits (62), Expect = 9.4 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -3 Query: 308 AAYPSAQIYLGLPASEQKVGYV 243 A +PSA +Y PA +KVG+V Sbjct: 453 AHFPSATVYSNFPAQNEKVGFV 474
>SYA_STAES (Q8CSA7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -2 Query: 324 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 163 VGQVDG VSV A +P++ + + G L + P++ GG GG+ G GT Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857
>SYA_STAEQ (Q5HNT2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -2 Query: 324 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 163 VGQVDG VSV A +P++ + + G L + P++ GG GG+ G GT Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857
>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor| Length = 873 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 241 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 137 +QR T+A Y + GSWSG SGQ+T Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,627,090 Number of Sequences: 219361 Number of extensions: 1078973 Number of successful extensions: 4286 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3968 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4252 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
