Clone Name | rbart20g11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 244 bits (123), Expect = 2e-61 Identities = 237/275 (86%) Strand = Plus / Plus Query: 151 accctacccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccg 210 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 99000 accctgccaagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcttg 99059 Query: 211 gcgaacccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcg 270 ||||| || ||| ||||||||||| |||||| || || ||| |||||||||||| | Sbjct: 99060 gcgaagccggtcaccgccggccgcgacgcggcgtcggtgtagagctcctggtcggaggtg 99119 Query: 271 aacagccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtg 330 ||||| || ||||| ||||||||||||||||||| |||||||||| ||| || ||| Sbjct: 99120 aacaggccgaggccgccggcgaggttggcgtagtaggcgttgtcgaaggcggccggggtg 99179 Query: 331 acggggtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagc 390 | ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 99180 atggggtccatgttgacggcgatggtcggcgcgacgtcgcgcgggcacgccgccatcagc 99239 Query: 391 tgccgcgcgtacgacgggctgtacgacgggtccac 425 ||||||||||||| |||| ||| ||||||||||| Sbjct: 99240 tgccgcgcgtacgccgggtcgtaggacgggtccac 99274
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 244 bits (123), Expect = 2e-61 Identities = 237/275 (86%) Strand = Plus / Plus Query: 151 accctacccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccg 210 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 19379774 accctgccaagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcttg 19379833 Query: 211 gcgaacccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcg 270 ||||| || ||| ||||||||||| |||||| || || ||| |||||||||||| | Sbjct: 19379834 gcgaagccggtcaccgccggccgcgacgcggcgtcggtgtagagctcctggtcggaggtg 19379893 Query: 271 aacagccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtg 330 ||||| || ||||| ||||||||||||||||||| |||||||||| ||| || ||| Sbjct: 19379894 aacaggccgaggccgccggcgaggttggcgtagtaggcgttgtcgaaggcggccggggtg 19379953 Query: 331 acggggtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagc 390 | ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 19379954 atggggtccatgttgacggcgatggtcggcgcgacgtcgcgcgggcacgccgccatcagc 19380013 Query: 391 tgccgcgcgtacgacgggctgtacgacgggtccac 425 ||||||||||||| |||| ||| ||||||||||| Sbjct: 19380014 tgccgcgcgtacgccgggtcgtaggacgggtccac 19380048
>dbj|AK071392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091L24, full insert sequence Length = 1213 Score = 244 bits (123), Expect = 2e-61 Identities = 237/275 (86%) Strand = Plus / Minus Query: 151 accctacccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccg 210 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1012 accctgccaagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcttg 953 Query: 211 gcgaacccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcg 270 ||||| || ||| ||||||||||| |||||| || || ||| |||||||||||| | Sbjct: 952 gcgaagccggtcaccgccggccgcgacgcggcgtcggtgtagagctcctggtcggaggtg 893 Query: 271 aacagccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtg 330 ||||| || ||||| ||||||||||||||||||| |||||||||| ||| || ||| Sbjct: 892 aacaggccgaggccgccggcgaggttggcgtagtaggcgttgtcgaaggcggccggggtg 833 Query: 331 acggggtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagc 390 | ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 832 atggggtccatgttgacggcgatggtcggcgcgacgtcgcgcgggcacgccgccatcagc 773 Query: 391 tgccgcgcgtacgacgggctgtacgacgggtccac 425 ||||||||||||| |||| ||| ||||||||||| Sbjct: 772 tgccgcgcgtacgccgggtcgtaggacgggtccac 738
>tpe|BN000652.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx123 gene for class III peroxidase 123 precursor, exons 1-3 Length = 2260 Score = 244 bits (123), Expect = 2e-61 Identities = 237/275 (86%) Strand = Plus / Minus Query: 151 accctacccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccg 210 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2202 accctgccaagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcttg 2143 Query: 211 gcgaacccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcg 270 ||||| || ||| ||||||||||| |||||| || || ||| |||||||||||| | Sbjct: 2142 gcgaagccggtcaccgccggccgcgacgcggcgtcggtgtagagctcctggtcggaggtg 2083 Query: 271 aacagccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtg 330 ||||| || ||||| ||||||||||||||||||| |||||||||| ||| || ||| Sbjct: 2082 aacaggccgaggccgccggcgaggttggcgtagtaggcgttgtcgaaggcggccggggtg 2023 Query: 331 acggggtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagc 390 | ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2022 atggggtccatgttgacggcgatggtcggcgcgacgtcgcgcgggcacgccgccatcagc 1963 Query: 391 tgccgcgcgtacgacgggctgtacgacgggtccac 425 ||||||||||||| |||| ||| ||||||||||| Sbjct: 1962 tgccgcgcgtacgccgggtcgtaggacgggtccac 1928
>gb|AY751449.1| Sorghum bicolor cultivar PI.506012 genomic sequence Length = 391 Score = 220 bits (111), Expect = 3e-54 Identities = 231/271 (85%) Strand = Plus / Minus Query: 157 cccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccggcgaac 216 |||| ||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 391 cccatcttcaccatggcgtccttgaacgcctcgaagaagcgcgtctggttcccagcgaag 332 Query: 217 ccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcgaacagc 276 ||| ||| ||||||||||| ||| || || || |||||||||||||||||||||||| Sbjct: 331 cccctcaccgccggccgcgacgcgccgtcgctgtacagcgcctggtcggaggcgaacagg 272 Query: 277 cccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtgacgggg 336 |||||||| ||||||||||||||||||| ||| |||||| |||| || |||| ||| Sbjct: 271 cccaggccgccggcgaggttggcgtagtaggcgttatcgaaggcggtcggtgtgatcggg 212 Query: 337 tccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagctgccgc 396 ||||| |||||||||||| || | |||||||| ||||||| || |||| ||||||||| Sbjct: 211 tccatatcgacggcgatgtccgcgccgacgtccggcgggcaggcgcccatgagctgccgc 152 Query: 397 gcgtacgacgggctgtacgacgggtccaccg 427 ||||||| ||| |||||||||||||||||| Sbjct: 151 gcgtacgcagggttgtacgacgggtccaccg 121
>gb|AY111875.1| Zea mays CL6427_1 mRNA sequence Length = 560 Score = 182 bits (92), Expect = 6e-43 Identities = 272/332 (81%) Strand = Plus / Minus Query: 96 gttgaatgcggtgcagtctcgtctgatctccccgtccccgccgctcttcacccctaccct 155 |||||||||||||||||| | ||||||||||||| || |||| |||||||||| || || Sbjct: 547 gttgaatgcggtgcagtcactcctgatctccccgtgccggccggtcttcaccccaacact 488 Query: 156 acccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccggcgaa 215 ||||||||||||||||| ||||||||||||||||||||| | ||||||||| ||||| Sbjct: 487 gcccagcttgaccatggcgtccttgaacgcctcgaagaagcgggtctggttcttagcgaa 428 Query: 216 cccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcgaacag 275 || ||| ||||| |||| ||| || || || |||||||||||| |||| ||||| Sbjct: 427 gtccctcaccgccggttgcgacgcgccgtcgctgtacagcgcctggtccgaggtgaacaa 368 Query: 276 ccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtgacggg 335 |||||||| ||||||||||||||||||| ||| |||||| |||| || |||| || Sbjct: 367 tcccaggccgccggcgaggttggcgtagtaggcgttatcgaaggcggtcggtgtgattgg 308 Query: 336 gtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagctgccg 395 |||||| | |||||||||| | | ||||| | ||||||| || |||| |||||||| Sbjct: 307 gtccatattgacggcgatgtctgcgccgacgccaggcgggcaggcgtccattagctgccg 248 Query: 396 cgcgtacgacgggctgtacgacgggtccaccg 427 |||||||| ||| |||||||||||||||||| Sbjct: 247 cgcgtacgcagggttgtacgacgggtccaccg 216
>ref|XM_483499.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1345 Score = 99.6 bits (50), Expect = 7e-18 Identities = 236/298 (79%) Strand = Plus / Minus Query: 96 gttgaatgcggtgcagtctcgtctgatctccccgtccccgccgctcttcacccctaccct 155 ||||||||| |||||||||| |||| ||| || ||| |||| ||| ||||||| ||| Sbjct: 1073 gttgaatgcagtgcagtctctcctgacctctccatccttgccggccttgacccctagcct 1014 Query: 156 acccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccggcgaa 215 |||||| ||||||||| | ||| || ||||||||| |||||||| ||||||| Sbjct: 1013 ccccagcctgaccatggagctcacgaaggcatcgaagaaggcggtctggttgacggcgaa 954 Query: 216 cccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcgaacag 275 | |||| |||| ||||||| ||| || || || ||| |||||||||||| ||| || Sbjct: 953 ctcctcgacggtgcgccgcgacgcgccgtcggtgtagagcacctggtcggaggtgaagag 894 Query: 276 ccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtgacggg 335 || ||||| | ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 893 gccgaggccattgacgaggttggagtagtagacgttgtcgaagacgatggggctgacggg 834 Query: 336 gtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagctgc 393 |||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||| Sbjct: 833 gtccatgttgacggcgatggtcttgccgacgtcgcgcgggcacgcctccatcagctgc 776
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 99.6 bits (50), Expect = 7e-18 Identities = 236/298 (79%) Strand = Plus / Plus Query: 96 gttgaatgcggtgcagtctcgtctgatctccccgtccccgccgctcttcacccctaccct 155 ||||||||| |||||||||| |||| ||| || ||| |||| ||| ||||||| ||| Sbjct: 26540018 gttgaatgcagtgcagtctctcctgacctctccatccttgccggccttgacccctagcct 26540077 Query: 156 acccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccggcgaa 215 |||||| ||||||||| | ||| || ||||||||| |||||||| ||||||| Sbjct: 26540078 ccccagcctgaccatggagctcacgaaggcatcgaagaaggcggtctggttgacggcgaa 26540137 Query: 216 cccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcgaacag 275 | |||| |||| ||||||| ||| || || || ||| |||||||||||| ||| || Sbjct: 26540138 ctcctcgacggtgcgccgcgacgcgccgtcggtgtagagcacctggtcggaggtgaagag 26540197 Query: 276 ccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtgacggg 335 || ||||| | ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 26540198 gccgaggccattgacgaggttggagtagtagacgttgtcgaagacgatggggctgacggg 26540257 Query: 336 gtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagctgc 393 |||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||| Sbjct: 26540258 gtccatgttgacggcgatggtcttgccgacgtcgcgcgggcacgcctccatcagctgc 26540315
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 99.6 bits (50), Expect = 7e-18 Identities = 236/298 (79%) Strand = Plus / Plus Query: 96 gttgaatgcggtgcagtctcgtctgatctccccgtccccgccgctcttcacccctaccct 155 ||||||||| |||||||||| |||| ||| || ||| |||| ||| ||||||| ||| Sbjct: 88885 gttgaatgcagtgcagtctctcctgacctctccatccttgccggccttgacccctagcct 88944 Query: 156 acccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccggcgaa 215 |||||| ||||||||| | ||| || ||||||||| |||||||| ||||||| Sbjct: 88945 ccccagcctgaccatggagctcacgaaggcatcgaagaaggcggtctggttgacggcgaa 89004 Query: 216 cccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcgaacag 275 | |||| |||| ||||||| ||| || || || ||| |||||||||||| ||| || Sbjct: 89005 ctcctcgacggtgcgccgcgacgcgccgtcggtgtagagcacctggtcggaggtgaagag 89064 Query: 276 ccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtgacggg 335 || ||||| | ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 89065 gccgaggccattgacgaggttggagtagtagacgttgtcgaagacgatggggctgacggg 89124 Query: 336 gtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagctgc 393 |||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||| Sbjct: 89125 gtccatgttgacggcgatggtcttgccgacgtcgcgcgggcacgcctccatcagctgc 89182
>dbj|AK119370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-H09, full insert sequence Length = 2945 Score = 99.6 bits (50), Expect = 7e-18 Identities = 236/298 (79%) Strand = Plus / Plus Query: 96 gttgaatgcggtgcagtctcgtctgatctccccgtccccgccgctcttcacccctaccct 155 ||||||||| |||||||||| |||| ||| || ||| |||| ||| ||||||| ||| Sbjct: 1116 gttgaatgcagtgcagtctctcctgacctctccatccttgccggccttgacccctagcct 1175 Query: 156 acccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccggcgaa 215 |||||| ||||||||| | ||| || ||||||||| |||||||| ||||||| Sbjct: 1176 ccccagcctgaccatggagctcacgaaggcatcgaagaaggcggtctggttgacggcgaa 1235 Query: 216 cccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcgaacag 275 | |||| |||| ||||||| ||| || || || ||| |||||||||||| ||| || Sbjct: 1236 ctcctcgacggtgcgccgcgacgcgccgtcggtgtagagcacctggtcggaggtgaagag 1295 Query: 276 ccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtgacggg 335 || ||||| | ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 1296 gccgaggccattgacgaggttggagtagtagacgttgtcgaagacgatggggctgacggg 1355 Query: 336 gtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagctgc 393 |||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||| Sbjct: 1356 gtccatgttgacggcgatggtcttgccgacgtcgcgcgggcacgcctccatcagctgc 1413
>dbj|AK073978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N21, full insert sequence Length = 1345 Score = 99.6 bits (50), Expect = 7e-18 Identities = 236/298 (79%) Strand = Plus / Minus Query: 96 gttgaatgcggtgcagtctcgtctgatctccccgtccccgccgctcttcacccctaccct 155 ||||||||| |||||||||| |||| ||| || ||| |||| ||| ||||||| ||| Sbjct: 1073 gttgaatgcagtgcagtctctcctgacctctccatccttgccggccttgacccctagcct 1014 Query: 156 acccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccggcgaa 215 |||||| ||||||||| | ||| || ||||||||| |||||||| ||||||| Sbjct: 1013 ccccagcctgaccatggagctcacgaaggcatcgaagaaggcggtctggttgacggcgaa 954 Query: 216 cccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcgaacag 275 | |||| |||| ||||||| ||| || || || ||| |||||||||||| ||| || Sbjct: 953 ctcctcgacggtgcgccgcgacgcgccgtcggtgtagagcacctggtcggaggtgaagag 894 Query: 276 ccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtgacggg 335 || ||||| | ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 893 gccgaggccattgacgaggttggagtagtagacgttgtcgaagacgatggggctgacggg 834 Query: 336 gtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagctgc 393 |||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||| Sbjct: 833 gtccatgttgacggcgatggtcttgccgacgtcgcgcgggcacgcctccatcagctgc 776
>tpe|BN000648.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx119 gene for class III peroxidase 119 precursor, exons 1-3 Length = 2477 Score = 99.6 bits (50), Expect = 7e-18 Identities = 236/298 (79%) Strand = Plus / Minus Query: 96 gttgaatgcggtgcagtctcgtctgatctccccgtccccgccgctcttcacccctaccct 155 ||||||||| |||||||||| |||| ||| || ||| |||| ||| ||||||| ||| Sbjct: 2471 gttgaatgcagtgcagtctctcctgacctctccatccttgccggccttgacccctagcct 2412 Query: 156 acccagcttgaccatggcctccttgaacgcctcgaagaagagcgtctggttcccggcgaa 215 |||||| ||||||||| | ||| || ||||||||| |||||||| ||||||| Sbjct: 2411 ccccagcctgaccatggagctcacgaaggcatcgaagaaggcggtctggttgacggcgaa 2352 Query: 216 cccctccacggccggccgcgaggcggcgccgtcgtgcagcgcctggtcggaggcgaacag 275 | |||| |||| ||||||| ||| || || || ||| |||||||||||| ||| || Sbjct: 2351 ctcctcgacggtgcgccgcgacgcgccgtcggtgtagagcacctggtcggaggtgaagag 2292 Query: 276 ccccaggcccgcggcgaggttggcgtagtacttgttgtcgaagacggtgggcgtgacggg 335 || ||||| | ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 2291 gccgaggccattgacgaggttggagtagtagacgttgtcgaagacgatggggctgacggg 2232 Query: 336 gtccatgtcgacggcgatggtcgggtcgacgtcctgcgggcacgccgccatcagctgc 393 |||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||| Sbjct: 2231 gtccatgttgacggcgatggtcttgccgacgtcgcgcgggcacgcctccatcagctgc 2174
>gb|BT018622.1| Zea mays clone EL01N0502C02.d mRNA sequence Length = 1473 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 257 cctggtcggaggcgaacagccccaggcccgcggcgaggttggcgtagtacttgttgtcga 316 ||||||||||||||||||||||| |||| | | ||||||||| |||||| |||||||| Sbjct: 1038 cctggtcggaggcgaacagcccccggccgtccaccaggttggcgaagtactggttgtcga 979 Query: 317 ag 318 || Sbjct: 978 ag 977
>ref|XM_474444.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 774 gtagtacttgttgtcgaaggcgttgggcgtg 744
>ref|NM_189373.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 796 cgtagtacttgttgtcgaaggcgttgggcgt 766
>ref|NM_189371.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 808 cgtagtacttgttgtcgaaggcgttgggcgt 778
>emb|Y13905.1|ZMY13905 Zea mays mRNA for anionic peroxidase Length = 1248 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 860 gtagtacttgttgtcgaaggcgttgggcgtg 830
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 90377 gtagtacttgttgtcgaaggcgttgggcgtg 90347
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 35223084 gtagtacttgttgtcgaaggcgttgggcgtg 35223114 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 257 cctggtcggaggcgaacagccccaggcccgcggcgaggttggcgtagtacttgttgtcga 316 |||||||||||| ||||| |||| | || || | |||||| ||||||||||||||||| Sbjct: 35227799 cctggtcggaggtgaacaccccctgaccggccaccaggttgctgtagtacttgttgtcga 35227858 Query: 317 a 317 | Sbjct: 35227859 a 35227859
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 42429954 cgtagtacttgttgtcgaaggcgttgggcgt 42429924 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 42424436 cgtagtacttgttgtcgaaggcgttgggcgt 42424406 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaag 318 |||||||||||||||||||| Sbjct: 42434874 cgtagtacttgttgtcgaag 42434855
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 89292 cgtagtacttgttgtcgaaggcgttgggcgt 89262 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 83774 cgtagtacttgttgtcgaaggcgttgggcgt 83744 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaag 318 |||||||||||||||||||| Sbjct: 94212 cgtagtacttgttgtcgaag 94193
>dbj|AK109340.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E11, full insert sequence Length = 1346 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 928 cgtagtacttgttgtcgaaggcgttgggcgt 898
>dbj|AK119199.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D02, full insert sequence Length = 1390 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 928 cgtagtacttgttgtcgaaggcgttgggcgt 898
>dbj|AK104833.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-B05, full insert sequence Length = 1298 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 830 gtagtacttgttgtcgaaggcgttgggcgtg 800
>dbj|AK104420.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C03, full insert sequence Length = 1397 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 928 cgtagtacttgttgtcgaaggcgttgggcgt 898
>dbj|AK104065.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F04, full insert sequence Length = 1394 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 928 cgtagtacttgttgtcgaaggcgttgggcgt 898
>dbj|AK102307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B01, full insert sequence Length = 1487 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 981 gtagtacttgttgtcgaaggcgttgggcgtg 951
>dbj|AK073009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145L12, full insert sequence Length = 1395 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 929 cgtagtacttgttgtcgaaggcgttgggcgt 899
>dbj|AK060789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D09, full insert sequence Length = 1349 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 832 gtagtacttgttgtcgaaggcgttgggcgtg 802
>gb|AY110269.1| Zea mays CL1874_1 mRNA sequence Length = 1321 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 860 gtagtacttgttgtcgaaggcgttgggcgtg 830
>tpe|BN000588.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx59 gene for class III peroxidase 59 precursor, exons 1-3 Length = 1290 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 1023 gtagtacttgttgtcgaaggcgttgggcgtg 993
>tpe|BN000550.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx21 gene for class III peroxidase 21 precursor, exons 1-2 Length = 1232 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 1008 cgtagtacttgttgtcgaaggcgttgggcgt 978
>tpe|BN000549.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx20 gene for class III peroxidase 20 precursor, exons 1-2 Length = 2747 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgt 329 |||||||||||||||||||| || ||||||| Sbjct: 2457 cgtagtacttgttgtcgaaggcgttgggcgt 2427
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 66670 gtagtacttgttgtcgaaggcgttgggcgtg 66700
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 18929 gtagtacttgttgtcgaaggcgttgggcgtg 18959 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 257 cctggtcggaggcgaacagccccaggcccgcggcgaggttggcgtagtacttgttgtcga 316 |||||||||||| ||||| |||| | || || | |||||| ||||||||||||||||| Sbjct: 23644 cctggtcggaggtgaacaccccctgaccggccaccaggttgctgtagtacttgttgtcga 23703 Query: 317 a 317 | Sbjct: 23704 a 23704
>gb|AF019743.1|AF019743 Oryza sativa cationic peroxidase (OsCPX1) mRNA, complete cds Length = 1333 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtg 330 ||||||||||||||||||| || |||||||| Sbjct: 819 gtagtacttgttgtcgaaggcgttgggcgtg 789
>ref|NM_187572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Minus Query: 297 ggcgtagtacttgttgtcgaagacggtgggcgtgacggggtccatg 342 ||||||||| ||| |||| ||| || |||||||||||| ||||||| Sbjct: 732 ggcgtagtagttggtgtcaaaggcgttgggcgtgacggcgtccatg 687
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Plus Query: 297 ggcgtagtacttgttgtcgaagacggtgggcgtgacggggtccatg 342 ||||||||| ||| |||| ||| || |||||||||||| ||||||| Sbjct: 1152486 ggcgtagtagttggtgtcaaaggcgttgggcgtgacggcgtccatg 1152531 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 14284624 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 14284585 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 14274704 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 14274743
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Plus Query: 297 ggcgtagtacttgttgtcgaagacggtgggcgtgacggggtccatg 342 ||||||||| ||| |||| ||| || |||||||||||| ||||||| Sbjct: 56190 ggcgtagtagttggtgtcaaaggcgttgggcgtgacggcgtccatg 56235
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Plus Query: 297 ggcgtagtacttgttgtcgaagacggtgggcgtgacggggtccatg 342 ||||||||| ||| |||| ||| || |||||||||||| ||||||| Sbjct: 1152484 ggcgtagtagttggtgtcaaaggcgttgggcgtgacggcgtccatg 1152529 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 14279599 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 14279560 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 14269679 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 14269718
>dbj|AK103660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135H09, full insert sequence Length = 1506 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Minus Query: 297 ggcgtagtacttgttgtcgaagacggtgggcgtgacggggtccatg 342 ||||||||| ||| |||| ||| || |||||||||||| ||||||| Sbjct: 954 ggcgtagtagttggtgtcaaaggcgttgggcgtgacggcgtccatg 909
>dbj|AK073847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069F06, full insert sequence Length = 1491 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Minus Query: 297 ggcgtagtacttgttgtcgaagacggtgggcgtgacggggtccatg 342 ||||||||| ||| |||| ||| || |||||||||||| ||||||| Sbjct: 954 ggcgtagtagttggtgtcaaaggcgttgggcgtgacggcgtccatg 909
>dbj|AK060028.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F06, full insert sequence Length = 1147 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Minus Query: 297 ggcgtagtacttgttgtcgaagacggtgggcgtgacggggtccatg 342 ||||||||| ||| |||| ||| || |||||||||||| ||||||| Sbjct: 658 ggcgtagtagttggtgtcaaaggcgttgggcgtgacggcgtccatg 613
>tpe|BN000562.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx33 gene for class III peroxidase 33 precursor, exons 1-3 Length = 3361 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Minus Query: 297 ggcgtagtacttgttgtcgaagacggtgggcgtgacggggtccatg 342 ||||||||| ||| |||| ||| || |||||||||||| ||||||| Sbjct: 3157 ggcgtagtagttggtgtcaaaggcgttgggcgtgacggcgtccatg 3112
>ref|XM_474445.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1047 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 257 cctggtcggaggcgaacagccccaggcccgcggcgaggttggcgtagtacttgttgtcga 316 |||||||||||| ||||| |||| | || || | |||||| ||||||||||||||||| Sbjct: 829 cctggtcggaggtgaacaccccctgaccggccaccaggttgctgtagtacttgttgtcga 770 Query: 317 a 317 | Sbjct: 769 a 769
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tcgaagacggtgggcgtgacg 333 ||||||||||||||||||||| Sbjct: 2154872 tcgaagacggtgggcgtgacg 2154892
>ref|XM_419539.1| PREDICTED: Gallus gallus similar to heterogeneous nuclear ribonucleoprotein U isoform b; hnRNP U protein; scaffold attachment factor A; p120 nuclear protein (LOC421492), mRNA Length = 3233 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 cggccgcgaggcggcgccgtcgtgc 252 |||||| |||||||||||||||||| Sbjct: 329 cggccgagaggcggcgccgtcgtgc 353
>gb|AC080005.24| Homo sapiens 3 BAC RP11-475N22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169583 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccggcctcctccccttcctac 93 ||||||||||||||||||||| Sbjct: 25453 ccggcctcctccccttcctac 25433
>gb|AC006349.3|AC006349 Homo sapiens PAC clone RP5-892G5 from 14q24.3, complete sequence Length = 111937 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 gtaaaacatttctcaattaca 43 ||||||||||||||||||||| Sbjct: 54615 gtaaaacatttctcaattaca 54635
>emb|BX000461.4| Zebrafish DNA sequence from clone DKEY-170E5, complete sequence Length = 170304 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 aaacatttctcaattacagta 46 ||||||||||||||||||||| Sbjct: 2382 aaacatttctcaattacagta 2362
>dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132H20, full insert sequence Length = 1413 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 257 cctggtcggaggcgaacagccccaggcccgcggcgaggttggcgtagtacttgttgtcga 316 |||||||||||| ||||| |||| | || || | |||||| ||||||||||||||||| Sbjct: 932 cctggtcggaggtgaacaccccctgaccggccaccaggttgctgtagtacttgttgtcga 873 Query: 317 a 317 | Sbjct: 872 a 872
>dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032B08, full insert sequence Length = 3800 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 257 cctggtcggaggcgaacagccccaggcccgcggcgaggttggcgtagtacttgttgtcga 316 |||||||||||| ||||| |||| | || || | |||||| ||||||||||||||||| Sbjct: 3420 cctggtcggaggtgaacaccccctgaccggccaccaggttgctgtagtacttgttgtcga 3361 Query: 317 a 317 | Sbjct: 3360 a 3360
>tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx60 gene for class III peroxidase 60 precursor, exons 1-3 Length = 1221 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 257 cctggtcggaggcgaacagccccaggcccgcggcgaggttggcgtagtacttgttgtcga 316 |||||||||||| ||||| |||| | || || | |||||| ||||||||||||||||| Sbjct: 1003 cctggtcggaggtgaacaccccctgaccggccaccaggttgctgtagtacttgttgtcga 944 Query: 317 a 317 | Sbjct: 943 a 943
>dbj|AP002905.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1672E10 Length = 158401 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 cccctaccctacccagcttga 166 ||||||||||||||||||||| Sbjct: 67198 cccctaccctacccagcttga 67178
>ref|NM_189375.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaag 318 |||||||||||||||||||| Sbjct: 793 cgtagtacttgttgtcgaag 774
>ref|XM_388651.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08475.1) partial mRNA Length = 5055 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cctcgaagaagagcgtctgg 204 |||||||||||||||||||| Sbjct: 660 cctcgaagaagagcgtctgg 679
>ref|XM_503003.1| Yarrowia lipolytica CLIB122, YALI0D18810g predicted mRNA Length = 984 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcttgaccatggcctccttg 180 |||||||||||||||||||| Sbjct: 244 gcttgaccatggcctccttg 225
>gb|AC018653.29| Homo sapiens 12 BAC RP11-273B20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172155 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ttcacccctaccctacccag 161 |||||||||||||||||||| Sbjct: 18622 ttcacccctaccctacccag 18641
>emb|AJ566201.1|PAB566201 Picea abies mRNA for peroxidase (px2 gene) Length = 1062 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaagacggtgggcgtg 330 |||| |||||||||||||| ||| |||||||| Sbjct: 790 cgtaatacttgttgtcgaacacgttgggcgtg 759
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cccagcttgaccatggcctc 176 |||||||||||||||||||| Sbjct: 731690 cccagcttgaccatggcctc 731671
>gb|DQ159909.1| Phaseolus lunatus peroxidase (PER1) mRNA, partial cds Length = 886 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaag 318 |||||||||||||||||||| Sbjct: 802 cgtagtacttgttgtcgaag 783
>gb|AC010947.6| Homo sapiens chromosome 18, clone RP11-25L3, complete sequence Length = 185470 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ccccgtccccgccgctcttc 144 |||||||||||||||||||| Sbjct: 151948 ccccgtccccgccgctcttc 151967
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 33853 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 33814 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 23933 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 23972
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 96012 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 95973 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 86092 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 86131
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgtgcagcgcctggtcggag 267 |||||||||||||||||||| Sbjct: 28654281 cgtgcagcgcctggtcggag 28654262
>gb|AC020602.6| Homo sapiens BAC clone RP11-461M18 from 2, complete sequence Length = 167227 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aaaacatttctcaattacag 44 |||||||||||||||||||| Sbjct: 136485 aaaacatttctcaattacag 136466
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 cggcgccgtcgtgcagcgcctggt 262 ||||| |||||||||||||||||| Sbjct: 2397725 cggcgtcgtcgtgcagcgcctggt 2397702
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgtgcagcgcctggtcggag 267 |||||||||||||||||||| Sbjct: 145759 cgtgcagcgcctggtcggag 145740
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgtgcagcgcctggtcggag 267 |||||||||||||||||||| Sbjct: 54847 cgtgcagcgcctggtcggag 54828
>dbj|AK109480.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A07, full insert sequence Length = 1294 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaag 318 |||||||||||||||||||| Sbjct: 855 cgtagtacttgttgtcgaag 836
>dbj|AK104277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-A06, full insert sequence Length = 1229 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaag 318 |||||||||||||||||||| Sbjct: 816 cgtagtacttgttgtcgaag 797
>dbj|AK102172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086I12, full insert sequence Length = 1286 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaag 318 |||||||||||||||||||| Sbjct: 856 cgtagtacttgttgtcgaag 837
>dbj|AK073767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068K22, full insert sequence Length = 1266 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 827 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 788
>dbj|AK073198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022I15, full insert sequence Length = 1234 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgtgcagcgcctggtcggag 267 |||||||||||||||||||| Sbjct: 986 cgtgcagcgcctggtcggag 967
>dbj|AK061131.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-A02, full insert sequence Length = 1277 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaag 318 |||||||||||||||||||| Sbjct: 857 cgtagtacttgttgtcgaag 838
>tpe|BN000620.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx91 gene for class III peroxidase 91 precursor, exons 1-5 Length = 2224 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgtgcagcgcctggtcggag 267 |||||||||||||||||||| Sbjct: 2066 cgtgcagcgcctggtcggag 2047
>tpe|BN000572.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx43 gene for class III peroxidase 43 precursor, exons 1-2 Length = 1082 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 875 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 836
>tpe|BN000571.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx42 gene for class III peroxidase 42 precursor, exons 1-2 Length = 1082 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 300 gtagtacttgttgtcgaagacggtgggcgtgacggggtcc 339 |||||||| ||||||||| || |||||||||||| |||| Sbjct: 875 gtagtactggttgtcgaacgcgttgggcgtgacggcgtcc 836
>tpe|BN000551.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx22 gene for class III peroxidase 22 precursor, exon 1 Length = 1071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtagtacttgttgtcgaag 318 |||||||||||||||||||| Sbjct: 793 cgtagtacttgttgtcgaag 774
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gcagccggcctcctcccctt 88 |||||||||||||||||||| Sbjct: 4454803 gcagccggcctcctcccctt 4454822
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcttgaccatggcctccttg 180 |||||||||||||||||||| Sbjct: 2374969 gcttgaccatggcctccttg 2374950
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ggcggcgccgtcgtgcagcg 256 |||||||||||||||||||| Sbjct: 218173 ggcggcgccgtcgtgcagcg 218154
>emb|AL606904.12| Mouse DNA sequence from clone RP23-182D20 on chromosome 4, complete sequence Length = 172024 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccggcctcctccccttcct 91 |||||||||||||||||||| Sbjct: 135340 gccggcctcctccccttcct 135359
>dbj|AB023289.1| Pseudomonas fluorescens Has exporter genes, complete cds Length = 11273 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cggaggcgaacagccccagg 282 |||||||||||||||||||| Sbjct: 210 cggaggcgaacagccccagg 191 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,822,475 Number of Sequences: 3902068 Number of extensions: 2822475 Number of successful extensions: 66946 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 65767 Number of HSP's gapped (non-prelim): 1177 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)