>NUOF2_RHIME (P56913) NADH-quinone oxidoreductase chain F 2 (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain F 2) (NDH-1, chain F 2)
          Length = 421

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 27/106 (25%), Positives = 40/106 (37%)
 Frame = +1

Query: 16  YFMGKILAMVELLSVHSLQP*NKNELTDPNFFKIKGKRVDQIALCVFTK*NVLKNPSYFR 195
           Y  G+  AM+E L     QP  K               ++ +         V++  ++FR
Sbjct: 169 YICGEETAMLESLEGKRAQPRLKPPFPAVAGLYASPTVINNVETLACVPHIVMRGSAWFR 228

Query: 196 GSGAPRKPVPQRFGRSGDIRPAVLRRERIQA*ARALVLHHPFRPPP 333
           G G  R P P+ +  SG +R   L    +    R LV  H   P P
Sbjct: 229 GIGPDRSPGPKLYCLSGQVRKPGLYELPMGISLRELVEEHAGGPLP 274

>MASS1_BRARE (Q6JAN0) Monogenic audiogenic seizure susceptibility protein 1|
            homolog precursor (Very large G-protein coupled receptor
            1)
          Length = 6199

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 185  PILEEAEPHESRFRSGSDAQVTSGRPCCDGSES 283
            P   E +PH  R  +G+DA   SGRP   GS S
Sbjct: 1300 PSAVELQPHSRRRHAGTDALFFSGRPGAYGSIS 1332

>TF7L2_HUMAN (Q9NQB0) Transcription factor 7-like 2 (HMG box transcription|
           factor 4) (T-cell-specific transcription factor 4)
           (TCF-4) (hTCF-4)
          Length = 619

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 170 CLKIPPILEEAEPHESRFRSGSDAQVTSGRPC 265
           CL +PPI + + P + R R G D Q     PC
Sbjct: 449 CLSLPPITDLSAPKKCRARFGLDQQNNWCGPC 480

>6PGD_SHEEP (P00349) 6-phosphogluconate dehydrogenase, decarboxylating (EC|
           1.1.1.44)
          Length = 482

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 194 EEAEPHESRFRSGSDAQVTSGRPCCD 271
           +EA PH      G  A+V +G PCCD
Sbjct: 146 KEAWPHIKAIFQGIAAKVGTGEPCCD 171

>6PGD_HUMAN (P52209) 6-phosphogluconate dehydrogenase, decarboxylating (EC|
           1.1.1.44)
          Length = 482

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 194 EEAEPHESRFRSGSDAQVTSGRPCCD 271
           +EA PH      G  A+V +G PCCD
Sbjct: 146 KEAWPHIKTIFQGIAAKVGTGEPCCD 171

>TF7L2_MOUSE (Q924A0) Transcription factor 7-like 2 (HMG box transcription|
           factor 4) (T-cell-specific transcription factor 4)
           (TCF-4) (mTCF-4)
          Length = 459

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 170 CLKIPPILEEAEPHESRFRSGSDAQVTSGRPC 265
           CL +PPI + + P + R R G D Q     PC
Sbjct: 426 CLSLPPITDLSAPKKCRARFGLDQQNNWCGPC 457


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,159,319
Number of Sequences: 219361
Number of extensions: 872482
Number of successful extensions: 2049
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2049
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)