ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart20g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507055.1| PREDICTED Oryza sativa (japonica cultivar-group... 216 5e-53
2ref|XM_468435.1| Oryza sativa (japonica cultivar-group), mRNA 216 5e-53
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
4dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
5dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
6dbj|AK060511.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 5e-53
7dbj|AK100771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
8gb|AC120989.2| Oryza sativa (japonica cultivar-group) chromosome... 167 4e-38
9gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome... 167 4e-38
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
11dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
12ref|XM_425820.1| PREDICTED: Gallus gallus similar to leucine ric... 44 0.41
13gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.41
14ref|XM_593502.2| PREDICTED: Bos taurus similar to 5T4 oncofetal ... 42 1.6
15emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 42 1.6
16emb|BX571720.6| Zebrafish DNA sequence from clone DKEY-77G5 in l... 42 1.6
17emb|BX088593.12| Zebrafish DNA sequence from clone DKEY-6E12 in ... 42 1.6
18gb|AC017040.7| Homo sapiens BAC clone RP11-319B20 from 2, comple... 42 1.6
19ref|NM_032520.3| Homo sapiens N-acetylglucosamine-1-phosphate tr... 40 6.4
20ref|XM_477672.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
21gb|AY659140.1| Synthetic construct Peudomonas aeruginosa clone F... 40 6.4
22gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.4
23gb|AY203933.1| Homo sapiens LP2537 mRNA, complete cds 40 6.4
24emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.4
25emb|AL627442.10| Human DNA sequence from clone RP11-296E3 on chr... 40 6.4
26emb|AL589684.7| Human DNA sequence from clone RP11-437J19 on chr... 40 6.4
27gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.4
28emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 6.4
29gb|BC014592.1| Homo sapiens N-acetylglucosamine-1-phosphate tran... 40 6.4
30dbj|AK126110.1| Homo sapiens cDNA FLJ44122 fis, clone THYMU2003760 40 6.4
31emb|CR612240.1| full-length cDNA clone CS0DE008YK18 of Placenta ... 40 6.4
32emb|CR606005.1| full-length cDNA clone CS0DI030YG04 of Placenta ... 40 6.4
33emb|CR597542.1| full-length cDNA clone CS0DI058YL23 of Placenta ... 40 6.4
34gb|AC025856.13| Homo sapiens chromosome 8, clone RP11-430K7, com... 40 6.4
35gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, compl... 40 6.4
36gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, com... 40 6.4
37gb|AF033262.1|AF033262 Pseudomonas sp. YD-15 endoglucanase gene,... 40 6.4
38gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.4
39dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
40gb|AC083872.2|AC083872 Homo sapiens chromosome 7 clone RP11-639H... 40 6.4
41gb|AF302786.1|AF302786 Homo sapiens CAB56184 (CAB56184) mRNA, co... 40 6.4
42gb|AE004447.1| Pseudomonas aeruginosa PAO1, section 8 of 529 of ... 40 6.4
43gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.4
44dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.4
45dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
46emb|AL844887.10| Zebrafish DNA sequence from clone DKEY-66C10, c... 40 6.4
47dbj|AK110068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
48emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.4
49dbj|AK060507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
50gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.4
51gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.4 
>ref|XM_507055.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1202_E07.32 mRNA
          Length = 1810

 Score =  216 bits (109), Expect = 5e-53
 Identities = 267/319 (83%), Gaps = 3/319 (0%)
 Strand = Plus / Minus

                                                                        
Query: 153  ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
            |||| ||||| | ||| ||||||| |||||||||   ||| || ||||||||||||||||
Sbjct: 1542 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggcctccg 1483

                                                                        
Query: 213  gcagcgcgacgccgacctcgatgccgtgctgcccgccggtgccctcggcaagcgacaccg 272
            ||||||| ||||| | ||||||||||   || ||| ||    |||| || |  |||||||
Sbjct: 1482 gcagcgccacgccaatctcgatgccgccgtggccgtcgcgcgcctccgccatggacaccg 1423

                                                                        
Query: 273  tgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagtccgaagt 332
            ||||||||||||||||||||||||  |||||||||||   ||||||||| || |||||||
Sbjct: 1422 tgccgggcgtcttgtcgatggacaggagctccaccttcgccggccggcccagcccgaagt 1363

                                                                        
Query: 333  cggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgcggcacca 392
            |||||||||||||||||||||||||||||||||| | |||||| |||||  |||||| ||
Sbjct: 1362 cggtgtcgtacacgccgtaccgcggcgagccgccgatggacatcggccggtgcggcatca 1303

                                                                        
Query: 393  gcgagaggatcttctggaaccacccctcagcgcccgccagcacgccgtctccgtccggcg 452
            |||| | |||||||||||||||||| || |||||  |||||||||||||   |||  || 
Sbjct: 1302 gcgacacgatcttctggaaccacccgtcggcgccgtccagcacgccgtc---gtcgagcc 1246

                               
Query: 453  cccggatggccgcgccgat 471
            ||| |||||||||||||||
Sbjct: 1245 ccctgatggccgcgccgat 1227
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>ref|XM_468435.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1656

 Score =  216 bits (109), Expect = 5e-53
 Identities = 267/319 (83%), Gaps = 3/319 (0%)
 Strand = Plus / Minus

                                                                        
Query: 153  ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
            |||| ||||| | ||| ||||||| |||||||||   ||| || ||||||||||||||||
Sbjct: 1384 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggcctccg 1325

                                                                        
Query: 213  gcagcgcgacgccgacctcgatgccgtgctgcccgccggtgccctcggcaagcgacaccg 272
            ||||||| ||||| | ||||||||||   || ||| ||    |||| || |  |||||||
Sbjct: 1324 gcagcgccacgccaatctcgatgccgccgtggccgtcgcgcgcctccgccatggacaccg 1265

                                                                        
Query: 273  tgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagtccgaagt 332
            ||||||||||||||||||||||||  |||||||||||   ||||||||| || |||||||
Sbjct: 1264 tgccgggcgtcttgtcgatggacaggagctccaccttcgccggccggcccagcccgaagt 1205

                                                                        
Query: 333  cggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgcggcacca 392
            |||||||||||||||||||||||||||||||||| | |||||| |||||  |||||| ||
Sbjct: 1204 cggtgtcgtacacgccgtaccgcggcgagccgccgatggacatcggccggtgcggcatca 1145

                                                                        
Query: 393  gcgagaggatcttctggaaccacccctcagcgcccgccagcacgccgtctccgtccggcg 452
            |||| | |||||||||||||||||| || |||||  |||||||||||||   |||  || 
Sbjct: 1144 gcgacacgatcttctggaaccacccgtcggcgccgtccagcacgccgtc---gtcgagcc 1088

                               
Query: 453  cccggatggccgcgccgat 471
            ||| |||||||||||||||
Sbjct: 1087 ccctgatggccgcgccgat 1069
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  216 bits (109), Expect = 5e-53
 Identities = 267/319 (83%), Gaps = 3/319 (0%)
 Strand = Plus / Plus

                                                                            
Query: 153      ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
                |||| ||||| | ||| ||||||| |||||||||   ||| || ||||||||||||||||
Sbjct: 35240822 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggcctccg 35240881

                                                                            
Query: 213      gcagcgcgacgccgacctcgatgccgtgctgcccgccggtgccctcggcaagcgacaccg 272
                ||||||| ||||| | ||||||||||   || ||| ||    |||| || |  |||||||
Sbjct: 35240882 gcagcgccacgccaatctcgatgccgccgtggccgtcgcgcgcctccgccatggacaccg 35240941

                                                                            
Query: 273      tgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagtccgaagt 332
                ||||||||||||||||||||||||  |||||||||||   ||||||||| || |||||||
Sbjct: 35240942 tgccgggcgtcttgtcgatggacaggagctccaccttcgccggccggcccagcccgaagt 35241001

                                                                            
Query: 333      cggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgcggcacca 392
                |||||||||||||||||||||||||||||||||| | |||||| |||||  |||||| ||
Sbjct: 35241002 cggtgtcgtacacgccgtaccgcggcgagccgccgatggacatcggccggtgcggcatca 35241061

                                                                            
Query: 393      gcgagaggatcttctggaaccacccctcagcgcccgccagcacgccgtctccgtccggcg 452
                |||| | |||||||||||||||||| || |||||  |||||||||||||   |||  || 
Sbjct: 35241062 gcgacacgatcttctggaaccacccgtcggcgccgtccagcacgccgtc---gtcgagcc 35241118

                                   
Query: 453      cccggatggccgcgccgat 471
                ||| |||||||||||||||
Sbjct: 35241119 ccctgatggccgcgccgat 35241137



 Score =  159 bits (80), Expect = 1e-35
 Identities = 135/152 (88%), Gaps = 1/152 (0%)
 Strand = Plus / Minus

                                                                            
Query: 266      gacaccgtgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagt 325
                |||||||||||||||||||||||||||||||  |||||||||||  |||||||||| || 
Sbjct: 10944603 gacaccgtgccgggcgtcttgtcgatggacaggagctccaccttcatcggccggcccagc 10944544

                                                                            
Query: 326      ccgaagtcggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgc 385
                ||||||||||||||||||||| |||||||| |||||||| | | |||||| |||||  ||
Sbjct: 10944543 ccgaagtcggtgtcgtacacggcgtaccgc-gcgagccggcgatggacatcggccggtgc 10944485

                                                
Query: 386      ggcaccagcgagaggatcttctggaaccaccc 417
                |||| |||||| | ||||||||||||||||||
Sbjct: 10944484 ggcatcagcgacacgatcttctggaaccaccc 10944453



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                            
Query: 153      ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
                |||| ||||| | ||| ||||||| |||||||||   ||| || |||||||||| |||||
Sbjct: 10944716 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggactccg 10944657

                                          
Query: 213      gcagcgcgacgccgacctcgatgccg 238
                ||||||| ||||||| || |||||||
Sbjct: 10944656 gcagcgccacgccgatctagatgccg 10944631
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score =  216 bits (109), Expect = 5e-53
 Identities = 267/319 (83%), Gaps = 3/319 (0%)
 Strand = Plus / Plus

                                                                         
Query: 153   ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
             |||| ||||| | ||| ||||||| |||||||||   ||| || ||||||||||||||||
Sbjct: 52872 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggcctccg 52931

                                                                         
Query: 213   gcagcgcgacgccgacctcgatgccgtgctgcccgccggtgccctcggcaagcgacaccg 272
             ||||||| ||||| | ||||||||||   || ||| ||    |||| || |  |||||||
Sbjct: 52932 gcagcgccacgccaatctcgatgccgccgtggccgtcgcgcgcctccgccatggacaccg 52991

                                                                         
Query: 273   tgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagtccgaagt 332
             ||||||||||||||||||||||||  |||||||||||   ||||||||| || |||||||
Sbjct: 52992 tgccgggcgtcttgtcgatggacaggagctccaccttcgccggccggcccagcccgaagt 53051

                                                                         
Query: 333   cggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgcggcacca 392
             |||||||||||||||||||||||||||||||||| | |||||| |||||  |||||| ||
Sbjct: 53052 cggtgtcgtacacgccgtaccgcggcgagccgccgatggacatcggccggtgcggcatca 53111

                                                                         
Query: 393   gcgagaggatcttctggaaccacccctcagcgcccgccagcacgccgtctccgtccggcg 452
             |||| | |||||||||||||||||| || |||||  |||||||||||||   |||  || 
Sbjct: 53112 gcgacacgatcttctggaaccacccgtcggcgccgtccagcacgccgtc---gtcgagcc 53168

                                
Query: 453   cccggatggccgcgccgat 471
             ||| |||||||||||||||
Sbjct: 53169 ccctgatggccgcgccgat 53187
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1202_E07
          Length = 145014

 Score =  216 bits (109), Expect = 5e-53
 Identities = 267/319 (83%), Gaps = 3/319 (0%)
 Strand = Plus / Plus

                                                                          
Query: 153    ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
              |||| ||||| | ||| ||||||| |||||||||   ||| || ||||||||||||||||
Sbjct: 136178 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggcctccg 136237

                                                                          
Query: 213    gcagcgcgacgccgacctcgatgccgtgctgcccgccggtgccctcggcaagcgacaccg 272
              ||||||| ||||| | ||||||||||   || ||| ||    |||| || |  |||||||
Sbjct: 136238 gcagcgccacgccaatctcgatgccgccgtggccgtcgcgcgcctccgccatggacaccg 136297

                                                                          
Query: 273    tgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagtccgaagt 332
              ||||||||||||||||||||||||  |||||||||||   ||||||||| || |||||||
Sbjct: 136298 tgccgggcgtcttgtcgatggacaggagctccaccttcgccggccggcccagcccgaagt 136357

                                                                          
Query: 333    cggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgcggcacca 392
              |||||||||||||||||||||||||||||||||| | |||||| |||||  |||||| ||
Sbjct: 136358 cggtgtcgtacacgccgtaccgcggcgagccgccgatggacatcggccggtgcggcatca 136417

                                                                          
Query: 393    gcgagaggatcttctggaaccacccctcagcgcccgccagcacgccgtctccgtccggcg 452
              |||| | |||||||||||||||||| || |||||  |||||||||||||   |||  || 
Sbjct: 136418 gcgacacgatcttctggaaccacccgtcggcgccgtccagcacgccgtc---gtcgagcc 136474

                                 
Query: 453    cccggatggccgcgccgat 471
              ||| |||||||||||||||
Sbjct: 136475 ccctgatggccgcgccgat 136493
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>dbj|AK060511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D06, full
            insert sequence
          Length = 1656

 Score =  216 bits (109), Expect = 5e-53
 Identities = 267/319 (83%), Gaps = 3/319 (0%)
 Strand = Plus / Minus

                                                                        
Query: 153  ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
            |||| ||||| | ||| ||||||| |||||||||   ||| || ||||||||||||||||
Sbjct: 1384 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggcctccg 1325

                                                                        
Query: 213  gcagcgcgacgccgacctcgatgccgtgctgcccgccggtgccctcggcaagcgacaccg 272
            ||||||| ||||| | ||||||||||   || ||| ||    |||| || |  |||||||
Sbjct: 1324 gcagcgccacgccaatctcgatgccgccgtggccgtcgcgcgcctccgccatggacaccg 1265

                                                                        
Query: 273  tgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagtccgaagt 332
            ||||||||||||||||||||||||  |||||||||||   ||||||||| || |||||||
Sbjct: 1264 tgccgggcgtcttgtcgatggacaggagctccaccttcgccggccggcccagcccgaagt 1205

                                                                        
Query: 333  cggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgcggcacca 392
            |||||||||||||||||||||||||||||||||| | |||||| |||||  |||||| ||
Sbjct: 1204 cggtgtcgtacacgccgtaccgcggcgagccgccgatggacatcggccggtgcggcatca 1145

                                                                        
Query: 393  gcgagaggatcttctggaaccacccctcagcgcccgccagcacgccgtctccgtccggcg 452
            |||| | |||||||||||||||||| || |||||  |||||||||||||   |||  || 
Sbjct: 1144 gcgacacgatcttctggaaccacccgtcggcgccgtccagcacgccgtc---gtcgagcc 1088

                               
Query: 453  cccggatggccgcgccgat 471
            ||| |||||||||||||||
Sbjct: 1087 ccctgatggccgcgccgat 1069
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>dbj|AK100771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120A02, full
            insert sequence
          Length = 1810

 Score =  208 bits (105), Expect = 1e-50
 Identities = 266/319 (83%), Gaps = 3/319 (0%)
 Strand = Plus / Minus

                                                                        
Query: 153  ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
            |||| ||||| | ||| ||||||| |||||||||   ||| || ||||||||||||||||
Sbjct: 1542 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggcctccg 1483

                                                                        
Query: 213  gcagcgcgacgccgacctcgatgccgtgctgcccgccggtgccctcggcaagcgacaccg 272
            ||||||| ||||| | ||||||||||   || ||| ||    |||| || |  |||||||
Sbjct: 1482 gcagcgccacgccaatctcgatgccgccgtggccgtcgcgcgcctccgccatggacaccg 1423

                                                                        
Query: 273  tgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagtccgaagt 332
            ||||||||||||||||||||||||  |||||||||||   ||||||||| || |||||||
Sbjct: 1422 tgccgggcgtcttgtcgatggacaggagctccaccttcgccggccggcccagcccgaagt 1363

                                                                        
Query: 333  cggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgcggcacca 392
            |||||||||||||||||||||||||||||||||| | |||||| |||||  |||||| ||
Sbjct: 1362 cggtgtcgtacacgccgtaccgcggcgagccgccgatggacatcggccggtgcggcatca 1303

                                                                        
Query: 393  gcgagaggatcttctggaaccacccctcagcgcccgccagcacgccgtctccgtccggcg 452
            |||| | |||||||||||||||| | || |||||  |||||||||||||   |||  || 
Sbjct: 1302 gcgacacgatcttctggaaccactcgtcggcgccgtccagcacgccgtc---gtcgagcc 1246

                               
Query: 453  cccggatggccgcgccgat 471
            ||| |||||||||||||||
Sbjct: 1245 ccctgatggccgcgccgat 1227
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>gb|AC120989.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0032D15,
              complete sequence
          Length = 161968

 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Minus

                                                                          
Query: 266    gacaccgtgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagt 325
              |||||||||||||||||||||||||||||||  |||||||||||  ||||| |||| || 
Sbjct: 148220 gacaccgtgccgggcgtcttgtcgatggacaggagctccaccttcgtcggctggcccagc 148161

                                                                          
Query: 326    ccgaagtcggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgc 385
              ||||||||||||||||||||| ||||| ||||||||||||| | |||||| |||||  ||
Sbjct: 148160 ccgaagtcggtgtcgtacacggcgtacagcggcgagccgccgatggacatcggccggtgc 148101

                                              
Query: 386    ggcaccagcgagaggatcttctggaaccaccc 417
              |||| |||||| | ||||||||||||||||||
Sbjct: 148100 ggcatcagcgacacgatcttctggaaccaccc 148069



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                          
Query: 153    ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
              |||| ||||| | ||| ||||||| |||||||||   ||| || |||||||||| |||||
Sbjct: 148313 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggactccg 148254

                                        
Query: 213    gcagcgcgacgccgacctcgatgccg 238
              ||||||| ||||||| ||||||||||
Sbjct: 148253 gcagcgccacgccgatctcgatgccg 148228
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>gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1171_H02,
             complete sequence
          Length = 109969

 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Minus

                                                                         
Query: 266   gacaccgtgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagt 325
             |||||||||||||||||||||||||||||||  |||||||||||  ||||| |||| || 
Sbjct: 19847 gacaccgtgccgggcgtcttgtcgatggacaggagctccaccttcgtcggctggcccagc 19788

                                                                         
Query: 326   ccgaagtcggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgc 385
             ||||||||||||||||||||| ||||| ||||||||||||| | |||||| |||||  ||
Sbjct: 19787 ccgaagtcggtgtcgtacacggcgtacagcggcgagccgccgatggacatcggccggtgc 19728

                                             
Query: 386   ggcaccagcgagaggatcttctggaaccaccc 417
             |||| |||||| | ||||||||||||||||||
Sbjct: 19727 ggcatcagcgacacgatcttctggaaccaccc 19696



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 153   ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
             |||| ||||| | ||| ||||||| |||||||||   ||| || |||||||||| |||||
Sbjct: 19940 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggactccg 19881

                                       
Query: 213   gcagcgcgacgccgacctcgatgccg 238
             ||||||| ||||||| ||||||||||
Sbjct: 19880 gcagcgccacgccgatctcgatgccg 19855
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Minus

                                                                           
Query: 266     gacaccgtgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagt 325
               |||||||||||||||||||||||||||||||  |||||||||||  ||||| |||| || 
Sbjct: 9037850 gacaccgtgccgggcgtcttgtcgatggacaggagctccaccttcgtcggctggcccagc 9037791

                                                                           
Query: 326     ccgaagtcggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgc 385
               ||||||||||||||||||||| ||||| ||||||||||||| | |||||| |||||  ||
Sbjct: 9037790 ccgaagtcggtgtcgtacacggcgtacagcggcgagccgccgatggacatcggccggtgc 9037731

                                               
Query: 386     ggcaccagcgagaggatcttctggaaccaccc 417
               |||| |||||| | ||||||||||||||||||
Sbjct: 9037730 ggcatcagcgacacgatcttctggaaccaccc 9037699



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                           
Query: 153     ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
               |||| ||||| | ||| ||||||| |||||||||   ||| || |||||||||| |||||
Sbjct: 9037943 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggactccg 9037884

                                         
Query: 213     gcagcgcgacgccgacctcgatgccg 238
               ||||||| ||||||| ||||||||||
Sbjct: 9037883 gcagcgccacgccgatctcgatgccg 9037858
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>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1756_H07
          Length = 217205

 Score =  159 bits (80), Expect = 1e-35
 Identities = 135/152 (88%), Gaps = 1/152 (0%)
 Strand = Plus / Minus

                                                                          
Query: 266    gacaccgtgccgggcgtcttgtcgatggacaccagctccaccttgctcggccggccgagt 325
              |||||||||||||||||||||||||||||||  |||||||||||  |||||||||| || 
Sbjct: 150802 gacaccgtgccgggcgtcttgtcgatggacaggagctccaccttcatcggccggcccagc 150743

                                                                          
Query: 326    ccgaagtcggtgtcgtacacgccgtaccgcggcgagccgcccacggacatgggccgccgc 385
              ||||||||||||||||||||| |||||||| |||||||| | | |||||| |||||  ||
Sbjct: 150742 ccgaagtcggtgtcgtacacggcgtaccgc-gcgagccggcgatggacatcggccggtgc 150684

                                              
Query: 386    ggcaccagcgagaggatcttctggaaccaccc 417
              |||| |||||| | ||||||||||||||||||
Sbjct: 150683 ggcatcagcgacacgatcttctggaaccaccc 150652



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                          
Query: 153    ctcatagctggtgcaggccgtcggagaagcatgacgcgaagcgtgccatgtcggcctccg 212
              |||| ||||| | ||| ||||||| |||||||||   ||| || |||||||||| |||||
Sbjct: 150915 ctcacagctgcttcagtccgtcggcgaagcatgagctgaaccgcgccatgtcggactccg 150856

                                        
Query: 213    gcagcgcgacgccgacctcgatgccg 238
              ||||||| ||||||| || |||||||
Sbjct: 150855 gcagcgccacgccgatctagatgccg 150830
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>ref|XM_425820.1| PREDICTED: Gallus gallus similar to leucine rich repeat neuronal 5
           precursor; glioma amplified on chromosome 1 protein;
           leucine rich and ankyrin repeats 1 (LOC428261), mRNA
          Length = 2091

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 283 cttgtcgatggacaccagctcc 304
           ||||||||||||||||||||||
Sbjct: 906 cttgtcgatggacaccagctcc 885
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 222     cgccgacctcgatgccgtgctgcccgccgg 251
               ||||||||||||||||||| || |||||||
Sbjct: 3977217 cgccgacctcgatgccgtggtggccgccgg 3977246
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>ref|XM_593502.2| PREDICTED: Bos taurus similar to 5T4 oncofetal trophoblast
           glycoprotein (LOC540358), mRNA
          Length = 2393

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 gccgtgctgcccgccggtgcc 255
           |||||||||||||||||||||
Sbjct: 754 gccgtgctgcccgccggtgcc 774
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 222    cgccgacctcgatgccgtgctgcccgccg 250
              |||||||||||||||| ||||| ||||||
Sbjct: 232432 cgccgacctcgatgccctgctggccgccg 232460
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>emb|BX571720.6| Zebrafish DNA sequence from clone DKEY-77G5 in linkage group 17,
             complete sequence
          Length = 227706

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    atttattttgaagtatcataa 42
             |||||||||||||||||||||
Sbjct: 48193 atttattttgaagtatcataa 48173
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>emb|BX088593.12| Zebrafish DNA sequence from clone DKEY-6E12 in linkage group 18, complete
              sequence
          Length = 251217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 68     atacttacatttcataataacaata 92
              |||||||||||| ||||||||||||
Sbjct: 241512 atacttacatttaataataacaata 241536
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>gb|AC017040.7| Homo sapiens BAC clone RP11-319B20 from 2, complete sequence
          Length = 178446

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     tcatttattttgaagtatcat 40
              |||||||||||||||||||||
Sbjct: 113753 tcatttattttgaagtatcat 113773
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>ref|NM_032520.3| Homo sapiens N-acetylglucosamine-1-phosphate transferase, gamma
           subunit (GNPTG), mRNA
          Length = 1228

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ccagctccaccttgctcggccggc 320
           ||||||||||||||||| ||||||
Sbjct: 456 ccagctccaccttgctctgccggc 433
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>ref|XM_477672.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1529

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 211  cggcagcgcgacgccgacctcgatgccg 238
            ||||||||| || |||||||||||||||
Sbjct: 1352 cggcagcgccaccccgacctcgatgccg 1325
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>gb|AY659140.1| Synthetic construct Peudomonas aeruginosa clone FLH036874.01F
           PA0082 gene, partial cds
          Length = 1035

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 cgatgccgtgctgcccgccg 250
           ||||||||||||||||||||
Sbjct: 129 cgatgccgtgctgcccgccg 148
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 247     gccggtgccctcggcaagcgacaccgtg 274
               ||||||||||| |||||||| |||||||
Sbjct: 3809912 gccggtgcccttggcaagcgccaccgtg 3809939
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>gb|AY203933.1| Homo sapiens LP2537 mRNA, complete cds
          Length = 1191

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ccagctccaccttgctcggccggc 320
           ||||||||||||||||| ||||||
Sbjct: 419 ccagctccaccttgctctgccggc 396
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 288     cgatggacaccagctccacc 307
               ||||||||||||||||||||
Sbjct: 4270253 cgatggacaccagctccacc 4270234
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>emb|AL627442.10| Human DNA sequence from clone RP11-296E3 on chromosome 1 Contains the
             3' end of the SNX7 gene for sorting nexin7, complete
             sequence
          Length = 131815

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    aaatatacttacatttcataataa 87
             ||||||||||| ||||||||||||
Sbjct: 56078 aaatatacttagatttcataataa 56101
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>emb|AL589684.7| Human DNA sequence from clone RP11-437J19 on chromosome 6 Contains a
            novel gene, complete sequence
          Length = 94555

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 62   ccaaatatacttacatttcataat 85
            ||||||||| ||||||||||||||
Sbjct: 1364 ccaaatatatttacatttcataat 1341
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 451     cgcccggatggccgcgccga 470
               ||||||||||||||||||||
Sbjct: 3796581 cgcccggatggccgcgccga 3796600
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 450     gcgcccggatggccgcgccg 469
               ||||||||||||||||||||
Sbjct: 3813372 gcgcccggatggccgcgccg 3813391
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>gb|BC014592.1| Homo sapiens N-acetylglucosamine-1-phosphate transferase, gamma
           subunit, mRNA (cDNA clone MGC:26282 IMAGE:4824054),
           complete cds
          Length = 1220

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ccagctccaccttgctcggccggc 320
           ||||||||||||||||| ||||||
Sbjct: 451 ccagctccaccttgctctgccggc 428
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>dbj|AK126110.1| Homo sapiens cDNA FLJ44122 fis, clone THYMU2003760
          Length = 2400

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 297  ccagctccaccttgctcggccggc 320
            ||||||||||||||||| ||||||
Sbjct: 1437 ccagctccaccttgctctgccggc 1414
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>emb|CR612240.1| full-length cDNA clone CS0DE008YK18 of Placenta of Homo sapiens
           (human)
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ccagctccaccttgctcggccggc 320
           ||||||||||||||||| ||||||
Sbjct: 417 ccagctccaccttgctctgccggc 394
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>emb|CR606005.1| full-length cDNA clone CS0DI030YG04 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1317

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ccagctccaccttgctcggccggc 320
           ||||||||||||||||| ||||||
Sbjct: 457 ccagctccaccttgctctgccggc 434
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>emb|CR597542.1| full-length cDNA clone CS0DI058YL23 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1172

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ccagctccaccttgctcggccggc 320
           ||||||||||||||||| ||||||
Sbjct: 427 ccagctccaccttgctctgccggc 404
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>gb|AC025856.13| Homo sapiens chromosome 8, clone RP11-430K7, complete sequence
          Length = 167416

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ggcaattttgcaattctcct 122
             ||||||||||||||||||||
Sbjct: 31511 ggcaattttgcaattctcct 31530
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>gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, complete sequence
          Length = 164290

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    ggcaattttgcaattctcct 122
              ||||||||||||||||||||
Sbjct: 107792 ggcaattttgcaattctcct 107773
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>gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, complete sequence
          Length = 186012

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ggcaattttgcaattctcct 122
             ||||||||||||||||||||
Sbjct: 82294 ggcaattttgcaattctcct 82313
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>gb|AF033262.1|AF033262 Pseudomonas sp. YD-15 endoglucanase gene, complete cds
          Length = 2450

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 ccggcagcgcgacgccgacc 229
           ||||||||||||||||||||
Sbjct: 55  ccggcagcgcgacgccgacc 36
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     cagcgcccgccagcacgccg 439
               ||||||||||||||||||||
Sbjct: 2465344 cagcgcccgccagcacgccg 2465363
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 211      cggcagcgcgacgccgacctcgatgccg 238
                ||||||||| || |||||||||||||||
Sbjct: 13001536 cggcagcgccaccccgacctcgatgccg 13001509
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>gb|AC083872.2|AC083872 Homo sapiens chromosome 7 clone RP11-639H21, complete sequence
          Length = 186609

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    atcttcttcccttctcatag 159
              ||||||||||||||||||||
Sbjct: 159710 atcttcttcccttctcatag 159691
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>gb|AF302786.1|AF302786 Homo sapiens CAB56184 (CAB56184) mRNA, complete cds
          Length = 918

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ccagctccaccttgctcggccggc 320
           ||||||||||||||||| ||||||
Sbjct: 421 ccagctccaccttgctctgccggc 398
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>gb|AE004447.1| Pseudomonas aeruginosa PAO1, section 8 of 529 of the complete genome
          Length = 18088

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  cgatgccgtgctgcccgccg 250
            ||||||||||||||||||||
Sbjct: 5346 cgatgccgtgctgcccgccg 5365
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 381     gccgcggcaccagcgagagg 400
               ||||||||||||||||||||
Sbjct: 4284950 gccgcggcaccagcgagagg 4284931



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 457     gatggccgcgccgatcgccc 476
               ||||||||||||||||||||
Sbjct: 2003551 gatggccgcgccgatcgccc 2003570
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 214     cagcgcgacgccgacctcga 233
               ||||||||||||||||||||
Sbjct: 5397169 cagcgcgacgccgacctcga 5397150
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077F02
          Length = 172442

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 211   cggcagcgcgacgccgacctcgatgccg 238
             ||||||||| || |||||||||||||||
Sbjct: 75833 cggcagcgccaccccgacctcgatgccg 75806
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>emb|AL844887.10| Zebrafish DNA sequence from clone DKEY-66C10, complete sequence
          Length = 243870

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     tacatttcataataacaata 92
              ||||||||||||||||||||
Sbjct: 208497 tacatttcataataacaata 208516
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>dbj|AK110068.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-E05, full
            insert sequence
          Length = 3250

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  cgatgccgtgctgcccgccg 250
            ||||||||||||||||||||
Sbjct: 2443 cgatgccgtgctgcccgccg 2462
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 219     cgacgccgacctcgatgccg 238
               ||||||||||||||||||||
Sbjct: 3046635 cgacgccgacctcgatgccg 3046654
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>dbj|AK060507.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A03, full
            insert sequence
          Length = 1529

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 211  cggcagcgcgacgccgacctcgatgccg 238
            ||||||||| || |||||||||||||||
Sbjct: 1352 cggcagcgccaccccgacctcgatgccg 1325
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 225     cgacctcgatgccgtgctgc 244
               ||||||||||||||||||||
Sbjct: 3791878 cgacctcgatgccgtgctgc 3791897
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 231     cgatgccgtgctgcccgccggtgccctc 258
               |||||||| ||||||||||||| |||||
Sbjct: 1946635 cgatgccgcgctgcccgccggtcccctc 1946662


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,250,352
Number of Sequences: 3902068
Number of extensions: 4250352
Number of successful extensions: 87204
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85624
Number of HSP's gapped (non-prelim): 1578
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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