Clone Name | rbart20g03 |
---|---|
Clone Library Name | barley_pub |
>MYB4_ORYSA (Q7XBH4) Myb-related protein Myb4 (OsMyb4) (Transcription factor| RLTR1) Length = 257 Score = 41.6 bits (96), Expect = 0.001 Identities = 29/60 (48%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = -3 Query: 485 SMPLDDLNDVCMEPHDAFGKPDG--DMDYWLRLFMEXXXXXXXXXXXXXXXXGALDLPQI 312 SMPLD DV MEP DAF P DMDYWL +FME A DLPQI Sbjct: 213 SMPLDGY-DVSMEPGDAFVAPPSADDMDYWLGVFME--------------SGEAQDLPQI 257
>REV_HV1BN (P12485) REV protein (Anti-repression transactivator protein)| (ART/TRS) (Fragment) Length = 106 Score = 32.3 bits (72), Expect = 0.69 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 121 NQNGSKKATRRMISVLAGWLLVSSTGRAGNSSLLAIPPMQR 243 N+ +A +R I L+GW+L + GR+ L +PP++R Sbjct: 30 NRRRRWRARQRQIQSLSGWILSTFLGRSAEPVPLQLPPLER 70
>REV_HV1OY (P20887) REV protein (Anti-repression transactivator protein)| (ART/TRS) Length = 116 Score = 29.3 bits (64), Expect = 5.8 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +1 Query: 121 NQNGSKKATRRMISVLAGWLLVSSTGRAGNSSLLAIPPMQR 243 N+ + +R I ++GW+L + GR+ L +PP++R Sbjct: 40 NRRRRWRERQRQIRKISGWILSTYLGRSAEPVPLQLPPLER 80
>REV_HV1A2 (P04623) REV protein (Anti-repression transactivator protein)| (ART/TRS) Length = 116 Score = 29.3 bits (64), Expect = 5.8 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +1 Query: 121 NQNGSKKATRRMISVLAGWLLVSSTGRAGNSSLLAIPPMQR 243 N+ + +R I ++GW+L + GR+ L +PP++R Sbjct: 40 NRRRRWRERQRQIRSISGWILSTYLGRSAEPVPLQLPPLER 80
>REV_HV1SC (P05872) REV protein (Anti-repression transactivator protein)| (ART/TRS) Length = 116 Score = 28.5 bits (62), Expect = 9.9 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = +1 Query: 121 NQNGSKKATRRMISVLAGWLLVSSTGRAGNSSLLAIPPMQR 243 N+ + +R I ++GW+L + GR L +PP++R Sbjct: 40 NRRRRWRERQRQIRSISGWILSNYLGRLAEPVPLQLPPLER 80 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,681,280 Number of Sequences: 219361 Number of extensions: 990728 Number of successful extensions: 2284 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2275 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)