>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                           
Query: 369     gcatcaaaagatcacgagcagagagaagagcatgtagacgagccaacaggcgtaggcaat 428
               |||||| ||||  |||||||| ||||||||||||||||| ||||| || |||||||| ||
Sbjct: 9989394 gcatcagaagacgacgagcagcgagaagagcatgtagacaagccagcacgcgtaggcgat 9989335

                                                                 
Query: 429     gagtcccctatgctcatcgccgctggaggcaagctctgctagtaacctgg 478
               ||| ||||||||||| || ||||| || |||||||| || || |||||||
Sbjct: 9989334 gagccccctatgctcgtcaccgcttgatgcaagctcagcgagcaacctgg 9989285



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/80 (86%), Gaps = 2/80 (2%)
 Strand = Plus / Minus

                                                                           
Query: 96      ccatcaaacttcagcaaaagctaattacttaaaatattttcactgtcctgatcttgcctt 155
               |||||||  |||||||||| |||||||||| |  |||||||  |||| ||||||||||||
Sbjct: 9991265 ccatcaatattcagcaaaacctaattacttca--tattttcggtgtcttgatcttgcctt 9991208

                                   
Query: 156     acgtttctttaccaagatct 175
                | |||||||||||||||||
Sbjct: 9991207 tcttttctttaccaagatct 9991188

>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone
             OSJNBb0027B12, from chromosome 3, complete sequence
          Length = 127426

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                         
Query: 369   gcatcaaaagatcacgagcagagagaagagcatgtagacgagccaacaggcgtaggcaat 428
             |||||| ||||  |||||||| ||||||||||||||||| ||||| || |||||||| ||
Sbjct: 39310 gcatcagaagacgacgagcagcgagaagagcatgtagacaagccagcacgcgtaggcgat 39251

                                                               
Query: 429   gagtcccctatgctcatcgccgctggaggcaagctctgctagtaacctgg 478
             ||| ||||||||||| || ||||| || |||||||| || || |||||||
Sbjct: 39250 gagccccctatgctcgtcaccgcttgatgcaagctcagcgagcaacctgg 39201



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/80 (86%), Gaps = 2/80 (2%)
 Strand = Plus / Minus

                                                                         
Query: 96    ccatcaaacttcagcaaaagctaattacttaaaatattttcactgtcctgatcttgcctt 155
             |||||||  |||||||||| |||||||||| |  |||||||  |||| ||||||||||||
Sbjct: 41181 ccatcaatattcagcaaaacctaattacttca--tattttcggtgtcttgatcttgcctt 41124

                                 
Query: 156   acgtttctttaccaagatct 175
              | |||||||||||||||||
Sbjct: 41123 tcttttctttaccaagatct 41104

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                           
Query: 369     gcatcaaaagatcacgagcagagagaagagcatgtagacgagccaacaggcgtaggcaat 428
               |||||| ||||  |||||||| ||||||||||||||||| ||||| || |||||||| ||
Sbjct: 9987515 gcatcagaagacgacgagcagcgagaagagcatgtagacaagccagcacgcgtaggcgat 9987456

                                                                 
Query: 429     gagtcccctatgctcatcgccgctggaggcaagctctgctagtaacctgg 478
               ||| ||||||||||| || ||||| || |||||||| || || |||||||
Sbjct: 9987455 gagccccctatgctcgtcaccgcttgatgcaagctcagcgagcaacctgg 9987406



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/80 (86%), Gaps = 2/80 (2%)
 Strand = Plus / Minus

                                                                           
Query: 96      ccatcaaacttcagcaaaagctaattacttaaaatattttcactgtcctgatcttgcctt 155
               |||||||  |||||||||| |||||||||| |  |||||||  |||| ||||||||||||
Sbjct: 9989386 ccatcaatattcagcaaaacctaattacttca--tattttcggtgtcttgatcttgcctt 9989329

                                   
Query: 156     acgtttctttaccaagatct 175
                | |||||||||||||||||
Sbjct: 9989328 tcttttctttaccaagatct 9989309

>dbj|AK073108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023N20, full
           insert sequence
          Length = 930

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                       
Query: 369 gcatcaaaagatcacgagcagagagaagagcatgtagacgagccaacaggcgtaggcaat 428
           |||||| ||||  |||||||| ||||||||||||||||| ||||| || |||||||| ||
Sbjct: 507 gcatcagaagacgacgagcagcgagaagagcatgtagacaagccagcacgcgtaggcgat 448

                                                             
Query: 429 gagtcccctatgctcatcgccgctggaggcaagctctgctagtaacctgg 478
           ||| ||||||||||| || ||||| || |||||||| || || |||||||
Sbjct: 447 gagccccctatgctcgtcaccgcttgatgcaagctcagcgagcaacctgg 398



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/80 (86%), Gaps = 2/80 (2%)
 Strand = Plus / Minus

                                                                       
Query: 96  ccatcaaacttcagcaaaagctaattacttaaaatattttcactgtcctgatcttgcctt 155
           |||||||  |||||||||| |||||||||| |  |||||||  |||| ||||||||||||
Sbjct: 777 ccatcaatattcagcaaaacctaattacttca--tattttcggtgtcttgatcttgcctt 720

                               
Query: 156 acgtttctttaccaagatct 175
            | |||||||||||||||||
Sbjct: 719 tcttttctttaccaagatct 700

>dbj|AK064364.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-C01, full
           insert sequence
          Length = 1407

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                       
Query: 369 gcatcaaaagatcacgagcagagagaagagcatgtagacgagccaacaggcgtaggcaat 428
           |||||| ||||  |||||||| ||||||||||||||||| ||||| || |||||||| ||
Sbjct: 909 gcatcagaagacgacgagcagcgagaagagcatgtagacaagccagcacgcgtaggcgat 850

                                                             
Query: 429 gagtcccctatgctcatcgccgctggaggcaagctctgctagtaacctgg 478
           ||| ||||||||||| || ||||| || |||||||| || || |||||||
Sbjct: 849 gagccccctatgctcgtcaccgcttgatgcaagctcagcgagcaacctgg 800



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/80 (86%), Gaps = 2/80 (2%)
 Strand = Plus / Minus

                                                                        
Query: 96   ccatcaaacttcagcaaaagctaattacttaaaatattttcactgtcctgatcttgcctt 155
            |||||||  |||||||||| |||||||||| |  |||||||  |||| ||||||||||||
Sbjct: 1179 ccatcaatattcagcaaaacctaattacttca--tattttcggtgtcttgatcttgcctt 1122

                                
Query: 156  acgtttctttaccaagatct 175
             | |||||||||||||||||
Sbjct: 1121 tcttttctttaccaagatct 1102

>gb|AY107745.1| Zea mays PCO060046 mRNA sequence
          Length = 673

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 92/108 (85%)
 Strand = Plus / Plus

                                                                       
Query: 371 atcaaaagatcacgagcagagagaagagcatgtagacgagccaacaggcgtaggcaatga 430
           |||| ||||| |||||||  ||||||||||||||||||||||| || || || || ||||
Sbjct: 398 atcagaagatgacgagcaatgagaagagcatgtagacgagccagcacgcataagcgatga 457

                                                           
Query: 431 gtcccctatgctcatcgccgctggaggcaagctctgctagtaacctgg 478
           | ||||| ||||| || |||||||| ||||||||| |||||| |||||
Sbjct: 458 ggcccctgtgctcgtctccgctggaagcaagctctcctagtagcctgg 505

>gb|BT019216.1| Zea mays clone Contig889.F mRNA sequence
          Length = 1036

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 391 gagaagagcatgtagacgagccaacaggcgtaggcaatgagtcccctatgctcatcgccg 450
           ||||||||||||||||||||||| || || || || ||||| ||||| ||||| || || 
Sbjct: 575 gagaagagcatgtagacgagccagcacgcataagcgatgagccccctgtgctcgtctcca 516

                               
Query: 451 ctggaggcaagctctgctag 470
           ||||| ||||||||||||||
Sbjct: 515 ctggatgcaagctctgctag 496

>gb|AC121286.7| Mus musculus chromosome 12, clone RP23-36H21, complete sequence
          Length = 227648

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 112  aaagctaattacttaaaatat 132
            |||||||||||||||||||||
Sbjct: 5592 aaagctaattacttaaaatat 5612

>emb|CR394537.12| Zebrafish DNA sequence from clone CH211-119D19 in linkage group 16,
              complete sequence
          Length = 168543

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 231    acataacattttccaaacaac 251
              |||||||||||||||||||||
Sbjct: 111649 acataacattttccaaacaac 111669

>emb|BX470243.12| Zebrafish DNA sequence from clone CH211-79J19 in linkage group 16,
             complete sequence
          Length = 191645

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   acataacattttccaaacaac 251
             |||||||||||||||||||||
Sbjct: 45266 acataacattttccaaacaac 45286

>gb|AC135641.7| Mus musculus BAC clone RP23-376H20 from 12, complete sequence
          Length = 171371

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    aaagctaattacttaaaatat 132
              |||||||||||||||||||||
Sbjct: 115667 aaagctaattacttaaaatat 115687

>gb|AC119249.7| Mus musculus chromosome 7, clone RP24-274B19, complete sequence
          Length = 182985

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 230    tacataacattttccaaacaa 250
              |||||||||||||||||||||
Sbjct: 127778 tacataacattttccaaacaa 127758

>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 108     agcaaaagctaattacttaaaata 131
               |||||||||||||||||| |||||
Sbjct: 1717954 agcaaaagctaattactttaaata 1717931

>gb|AC116726.11| Mus musculus chromosome 10, clone RP23-285L15, complete sequence
          Length = 185427

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   taaaatattttcactgtcct 144
             ||||||||||||||||||||
Sbjct: 68207 taaaatattttcactgtcct 68226

>ref|XM_675543.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7366.2), mRNA
          Length = 1245

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 442 tcatcgccgctggaggcaag 461
           ||||||||||||||||||||
Sbjct: 287 tcatcgccgctggaggcaag 306

>emb|CT025534.4| M.truncatula DNA sequence from clone MTH2-1H4 on chromosome 3, complete
             sequence
          Length = 100991

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   tcaagaacagcatcaaaaga 379
             ||||||||||||||||||||
Sbjct: 43761 tcaagaacagcatcaaaaga 43780

>gb|AC146777.27| Medicago truncatula clone mth2-173c10, complete sequence
          Length = 121026

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   cacagaaactaaaggatgaa 215
             ||||||||||||||||||||
Sbjct: 70232 cacagaaactaaaggatgaa 70213

>gb|AC121239.34| Medicago truncatula clone mth1-8p19, complete sequence
          Length = 100985

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   tcaagaacagcatcaaaaga 379
             ||||||||||||||||||||
Sbjct: 43757 tcaagaacagcatcaaaaga 43776

>emb|AL161444.18| Human DNA sequence from clone RP11-312C2 on chromosome 9, complete
             sequence
          Length = 150563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   agcaaaagctaattacttaa 127
             ||||||||||||||||||||
Sbjct: 22082 agcaaaagctaattacttaa 22063

>emb|AL137068.10| Human DNA sequence from clone RP11-165P4 on chromosome 9q34.11-34.13
             Contains a novel gene, the CEP1 gene for centrosomal
             protein 1 (FAN, CEP110), the RAB14 gene for RAB14, member
             RAS oncogene family (DKFZp762K0911), the 5' end of a novel
             gene and a CpG island, complete sequence
          Length = 147029

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ataacattttccaaacaact 252
             ||||||||||||||||||||
Sbjct: 45822 ataacattttccaaacaact 45803

>gb|AC107394.3| Homo sapiens BAC clone RP11-617I14 from 4, complete sequence
          Length = 170971

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 195   ccacagaaactaaaggatgaaaag 218
             ||||||||||||||||| ||||||
Sbjct: 39913 ccacagaaactaaaggaagaaaag 39890

>emb|CR457484.9| Zebrafish DNA sequence from clone CH211-132F3 in linkage group 18,
              complete sequence
          Length = 169672

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    cacgagcagagagaagagca 400
              ||||||||||||||||||||
Sbjct: 167639 cacgagcagagagaagagca 167658

>emb|BX511081.8| Zebrafish DNA sequence from clone DKEY-6B12 in linkage group 21, complete
              sequence
          Length = 210246

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    aattacttaaaatattttca 137
              ||||||||||||||||||||
Sbjct: 194839 aattacttaaaatattttca 194858

>gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180335

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   caaaagctaattacttaaaa 129
             ||||||||||||||||||||
Sbjct: 98114 caaaagctaattacttaaaa 98133

>ref|NM_065385.3| Caenorhabditis elegans ZK1058.1 (ZK1058.1) mRNA, complete cds
          Length = 2549

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 ccatctcaagaacagcatca 374
           ||||||||||||||||||||
Sbjct: 838 ccatctcaagaacagcatca 819

>emb|Z35604.2|CEZK1058 Caenorhabditis elegans Cosmid ZK1058, complete sequence
          Length = 29101

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  ccatctcaagaacagcatca 374
            ||||||||||||||||||||
Sbjct: 8595 ccatctcaagaacagcatca 8614


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,823,392
Number of Sequences: 3902068
Number of extensions: 4823392
Number of successful extensions: 94953
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94826
Number of HSP's gapped (non-prelim): 127
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)