ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart20f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUVR2_ARATH (Q9FNC7) Histone-lysine N-methyltransferase SUVR2 (E... 28 6.7
2ANK3_HUMAN (Q12955) Ankyrin-3 (ANK-3) (Ankyrin-G) 28 6.7

>SUVR2_ARATH (Q9FNC7) Histone-lysine N-methyltransferase SUVR2 (EC 2.1.1.43)|
           (Suppressor of variegation 3-9-related protein 2)
           (Su(var)3-9-related protein 2) (Protein SET DOMAIN GROUP
           18)
          Length = 717

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +3

Query: 195 TDHKLSCTMDQEPSLEADDNATA-CAHTLSLAFTSLGSSPGL 317
           +DHKL+ T+++ P+LE   +A+      LS A  + GS+P L
Sbjct: 227 SDHKLAATIEEPPALELASSASGEVKINLSFAPATGGSNPHL 268



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>ANK3_HUMAN (Q12955) Ankyrin-3 (ANK-3) (Ankyrin-G)|
          Length = 4377

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +3

Query: 126  YFEERKENCGNLHTAVLVLELIITDHKLSCTMDQEPSLEADDNATACAHTLSLAFTSLGS 305
            + +ERK   G   TAV  L + +  HK     DQ+  +E  D   + A        S  +
Sbjct: 1414 FLKERKTTKGLPQTAVCNLNITLPAHKKETESDQDDEIEKTDRRQSFASLALRKRYSYLT 1473

Query: 306  SPGL 317
             PG+
Sbjct: 1474 EPGM 1477


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,943,501
Number of Sequences: 219361
Number of extensions: 895049
Number of successful extensions: 1956
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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