>ATG2_CANAL (Q59X11) Autophagy-related protein 2|
          Length = 1856

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 274  SISIWNLVCSYVTLVGTREFGTLLYK 197
            S S WN   SY+ ++G RE GT + K
Sbjct: 1377 STSTWNKFLSYMNILGDREIGTSMVK 1402

>VIM1_CARAU (P48671) Vimentin A1 (Fragment)|
          Length = 170

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +1

Query: 139 RKILHPDHEKTSRPLPSTTIYTARSQTLEYQPTSHSYKLNSICLC---LRGGRILN 297
           RK+L  +  + S PLP+ + +  R   LE +P   S     + +     R G++LN
Sbjct: 105 RKLLEGEESRISTPLPNFSSFNLRETMLELKPNIESTFTKKVLIKTIETRDGQVLN 160

>ALS2_PANTR (Q5BIW4) Alsin (Amyotrophic lateral sclerosis protein 2 homolog)|
          Length = 1657

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
 Frame = +1

Query: 115 TTCCNKKLRKI----LHPDHEKTSRPLPSTTIYTARSQTLEYQPTSHSYKLNSI---CLC 273
           T   N+ LRK+    +  D E   +P+PS  +       L   PT+ +  LNS+   C  
Sbjct: 342 TQAVNEYLRKLSDHSVREDSEHGEKPMPSQPLLEEAIPNLHSPPTTSTSALNSLVVSCAS 401

Query: 274 LRGGRILNVDGGATLSLTGV 333
             G R+        LSL  V
Sbjct: 402 AVGVRVAATYEAGALSLKKV 421

>ALS2_HUMAN (Q96Q42) Alsin (Amyotrophic lateral sclerosis protein 2)|
          Length = 1657

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
 Frame = +1

Query: 115 TTCCNKKLRKI----LHPDHEKTSRPLPSTTIYTARSQTLEYQPTSHSYKLNSI---CLC 273
           T   N+ LRK+    +  D E   +P+PS  +       L   PT+ +  LNS+   C  
Sbjct: 342 TQAVNEYLRKLSDHSVREDSEHGEKPMPSQPLLEEAIPNLHSPPTTSTSALNSLVVSCAS 401

Query: 274 LRGGRILNVDGGATLSLTGV 333
             G R+        LSL  V
Sbjct: 402 AVGVRVAATYEAGALSLKKV 421


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,891,408
Number of Sequences: 219361
Number of extensions: 1261747
Number of successful extensions: 3069
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3069
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)