ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart20e07 |
|---|---|
| Clone Library Name | barley_pub |
>TIP1_RAT (Q9QYU7) TGF-beta-inducible nuclear protein 1 (Protein CDK105)| Length = 260 Score = 144 bits (364), Expect = 9e-35 Identities = 67/83 (80%), Positives = 75/83 (90%) Frame = -2 Query: 475 FTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVV 296 F KAHVTHPELK TF L I+ VKKNP+ P+YT+LGV+T+GT+IEVNVSELGLVT GKV+ Sbjct: 178 FKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVI 237 Query: 295 WGKYAQVTNNPENDGCINAVLLV 227 WGKYAQVTNNPENDGCINAVLLV Sbjct: 238 WGKYAQVTNNPENDGCINAVLLV 260
>TIP1_MOUSE (Q9CR47) TGF-beta-inducible nuclear protein 1 (L-name-related| protein 42) (LNR42) Length = 260 Score = 144 bits (364), Expect = 9e-35 Identities = 67/83 (80%), Positives = 75/83 (90%) Frame = -2 Query: 475 FTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVV 296 F KAHVTHPELK TF L I+ VKKNP+ P+YT+LGV+T+GT+IEVNVSELGLVT GKV+ Sbjct: 178 FKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVI 237 Query: 295 WGKYAQVTNNPENDGCINAVLLV 227 WGKYAQVTNNPENDGCINAVLLV Sbjct: 238 WGKYAQVTNNPENDGCINAVLLV 260
>TIP1_HUMAN (O95478) TGF-beta-inducible nuclear protein 1 (Hairy cell leukemia| protein 1) Length = 260 Score = 144 bits (364), Expect = 9e-35 Identities = 67/83 (80%), Positives = 75/83 (90%) Frame = -2 Query: 475 FTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVV 296 F KAHVTHPELK TF L I+ VKKNP+ P+YT+LGV+T+GT+IEVNVSELGLVT GKV+ Sbjct: 178 FKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVI 237 Query: 295 WGKYAQVTNNPENDGCINAVLLV 227 WGKYAQVTNNPENDGCINAVLLV Sbjct: 238 WGKYAQVTNNPENDGCINAVLLV 260
>TIP1_BOVIN (Q3SX11) TGF-beta-inducible nuclear protein 1| Length = 260 Score = 144 bits (364), Expect = 9e-35 Identities = 67/83 (80%), Positives = 75/83 (90%) Frame = -2 Query: 475 FTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVV 296 F KAHVTHPELK TF L I+ VKKNP+ P+YT+LGV+T+GT+IEVNVSELGLVT GKV+ Sbjct: 178 FKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVI 237 Query: 295 WGKYAQVTNNPENDGCINAVLLV 227 WGKYAQVTNNPENDGCINAVLLV Sbjct: 238 WGKYAQVTNNPENDGCINAVLLV 260
>YEV6_YEAST (P40078) Hypothetical 29.7 kDa protein in RSP5-LCP5 intergenic| region Length = 261 Score = 129 bits (325), Expect = 3e-30 Identities = 62/81 (76%), Positives = 69/81 (85%) Frame = -2 Query: 469 KAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWG 290 KA+VTHPEL T L I++VKKNP PMYT LGVLT+GTIIEVNVSELG+VT GKVVWG Sbjct: 181 KANVTHPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTIIEVNVSELGMVTAGGKVVWG 240 Query: 289 KYAQVTNNPENDGCINAVLLV 227 KYAQVTN P+ DGC+NAVLLV Sbjct: 241 KYAQVTNEPDRDGCVNAVLLV 261
>RS8E_PICTO (Q6L0D3) 30S ribosomal protein S8e| Length = 125 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/79 (32%), Positives = 40/79 (50%) Frame = -2 Query: 466 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGK 287 A+V +P+ K T + I +VK+N P Y ++ RGT+I + + Sbjct: 62 ANVYNPKDKTTRKVKINTVKENSADPHYVQRNIMNRGTVISTELGD-------------- 107 Query: 286 YAQVTNNPENDGCINAVLL 230 A++T+ P DG INAVLL Sbjct: 108 -ARITSRPGQDGVINAVLL 125
>RS8E_SULAC (Q4JAP5) 30S ribosomal protein S8e| Length = 128 Score = 42.4 bits (98), Expect = 6e-04 Identities = 28/79 (35%), Positives = 42/79 (53%) Frame = -2 Query: 466 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGK 287 A+V P+ K + IISV ++P Y G++ +GT+I+ +ELG Sbjct: 63 ANVYDPQSKTAKKVKIISVLESPANREYARRGIIVKGTLIQ---TELG------------ 107 Query: 286 YAQVTNNPENDGCINAVLL 230 A+VT+ P DG INA+LL Sbjct: 108 KAKVTSRPGQDGIINALLL 126
>RS8E_METJA (P54055) 30S ribosomal protein S8e| Length = 129 Score = 41.2 bits (95), Expect = 0.001 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = -2 Query: 466 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGK 287 A+V PE + II+V++N Y V+T+G IIE +E+GL Sbjct: 64 ANVLDPETGTCKKVKIITVRENKANIHYVRRNVITKGAIIE---TEIGL----------- 109 Query: 286 YAQVTNNPENDGCINAVLL 230 A+VT+ P DG +NA+L+ Sbjct: 110 -AKVTSRPGQDGTVNAILI 127
>RS8E_SULTO (Q976K3) 30S ribosomal protein S8e| Length = 128 Score = 40.0 bits (92), Expect = 0.003 Identities = 26/81 (32%), Positives = 41/81 (50%) Frame = -2 Query: 472 TKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVW 293 T A++ P+ K + I+SV + P Y G++ +G+II+ T GK Sbjct: 61 TFANIYDPQEKVSKKAKILSVIETPANKEYARRGIIVKGSIIQ---------TELGK--- 108 Query: 292 GKYAQVTNNPENDGCINAVLL 230 A+VT+ P DG INA+L+ Sbjct: 109 ---AKVTSRPGQDGTINAILI 126
>RS8E_METKA (Q8TV55) 30S ribosomal protein S8e| Length = 133 Score = 39.3 bits (90), Expect = 0.005 Identities = 29/81 (35%), Positives = 39/81 (48%) Frame = -2 Query: 472 TKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVW 293 T A+V PE + I V KNP Y GV+T+G II +E+GL Sbjct: 61 THANVADPETGEVKCVRIEEVVKNPASQYYERHGVITKGAIIR---TEIGL--------- 108 Query: 292 GKYAQVTNNPENDGCINAVLL 230 A+VTN P + +NAVL+ Sbjct: 109 ---AKVTNRPGQEPVVNAVLI 126
>RS8E_ARCFU (O28130) 30S ribosomal protein S8e| Length = 125 Score = 38.5 bits (88), Expect = 0.009 Identities = 24/79 (30%), Positives = 38/79 (48%) Frame = -2 Query: 466 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGK 287 A+V P+ ++I SV +NP Y V+T+G II ++ + Sbjct: 61 ANVYDPKQGKVVRVEIESVVENPAHVHYARRNVITKGAIIATSIGK-------------- 106 Query: 286 YAQVTNNPENDGCINAVLL 230 A+VTN P +G +NAVL+ Sbjct: 107 -ARVTNRPSQEGVVNAVLI 124
>RS8E_THEVO (Q97BA2) 30S ribosomal protein S8e| Length = 127 Score = 38.1 bits (87), Expect = 0.012 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = -2 Query: 421 IISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 242 II+VK+NP Y ++ +GTII + E A VT+ P DG IN Sbjct: 78 IITVKENPANSHYVQRNIINKGTIISTEIGE---------------AIVTSRPGQDGVIN 122 Query: 241 AVLL 230 A LL Sbjct: 123 AKLL 126
>RS8E_METMA (Q8PVC6) 30S ribosomal protein S8e| Length = 125 Score = 37.0 bits (84), Expect = 0.026 Identities = 26/79 (32%), Positives = 38/79 (48%) Frame = -2 Query: 466 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGK 287 A++T+P+ T I +V N Y +LT+G++I TP G Sbjct: 61 ANITNPKDGKTVTATIETVIDNTANKHYVRRNILTKGSVIR---------TPVGT----- 106 Query: 286 YAQVTNNPENDGCINAVLL 230 A+VT+ P DG INAVL+ Sbjct: 107 -ARVTSRPGQDGVINAVLI 124
>RS8E_PYRHO (O58830) 30S ribosomal protein S8e| Length = 127 Score = 36.6 bits (83), Expect = 0.034 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -2 Query: 421 IISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 242 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVLENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 241 AVLL 230 A+LL Sbjct: 122 AILL 125
>RS8E_PYRKO (Q5JGF3) 30S ribosomal protein S8e| Length = 130 Score = 36.6 bits (83), Expect = 0.034 Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -2 Query: 421 IISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 242 I++V +NP Y ++T+G IIE T GK + VT+ P DG +N Sbjct: 77 ILNVVENPANRQYARRNIITKGAIIE---------TEIGKAI------VTSRPGQDGVVN 121 Query: 241 AVLL 230 AVL+ Sbjct: 122 AVLI 125
>RS8E_PYRFU (Q8U1Y5) 30S ribosomal protein S8e| Length = 127 Score = 36.2 bits (82), Expect = 0.045 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -2 Query: 421 IISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 242 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVIENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 241 AVLL 230 A+LL Sbjct: 122 AILL 125
>RS8E_PYRAB (Q9UZL4) 30S ribosomal protein S8e| Length = 127 Score = 36.2 bits (82), Expect = 0.045 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -2 Query: 421 IISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 242 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVIENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 241 AVLL 230 A+LL Sbjct: 122 AILL 125
>RS8E_NANEQ (P61301) 30S ribosomal protein S8e| Length = 127 Score = 36.2 bits (82), Expect = 0.045 Identities = 23/78 (29%), Positives = 37/78 (47%) Frame = -2 Query: 463 HVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKY 284 +V P T I+ NP+ + +G+LT+G I+E +ELG V Sbjct: 64 NVYDPTQGKTVKAKIVRFLDNPSNRNFARMGILTKGAIVE---TELGKV----------- 109 Query: 283 AQVTNNPENDGCINAVLL 230 ++T+ P DG +N VL+ Sbjct: 110 -KITSRPGQDGVLNGVLI 126
>RS8E_THEAC (Q9HJD0) 30S ribosomal protein S8e| Length = 127 Score = 35.8 bits (81), Expect = 0.059 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -2 Query: 421 IISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 242 II+VK NP Y ++ +GT+I + + A VT+ P DG IN Sbjct: 78 IITVKANPANSHYVQRNIINKGTVIATEIGD---------------AVVTSRPGQDGVIN 122 Query: 241 AVLL 230 A LL Sbjct: 123 AKLL 126
>RS8E_HALMA (P49402) 30S ribosomal protein S8e (HS23)| Length = 123 Score = 35.0 bits (79), Expect = 0.10 Identities = 20/69 (28%), Positives = 33/69 (47%) Frame = -2 Query: 436 TFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPEN 257 T I +V +NP+ P Y ++T+G I+E + + A+VT+ P Sbjct: 69 TIEATIENVVENPSNPNYARRNIITKGAILETSEGQ---------------ARVTSRPGQ 113 Query: 256 DGCINAVLL 230 G +NAVL+ Sbjct: 114 HGQVNAVLV 122
>RS8E_METAC (Q8TS82) 30S ribosomal protein S8e| Length = 125 Score = 35.0 bits (79), Expect = 0.10 Identities = 23/79 (29%), Positives = 37/79 (46%) Frame = -2 Query: 466 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGK 287 A+VT+P+ T I +V N Y +LT+G++I ++ Sbjct: 61 ANVTNPKDGKTVTAPIETVIDNTANKHYVRRNILTKGSVIRTSMGT-------------- 106 Query: 286 YAQVTNNPENDGCINAVLL 230 A+VT+ P DG +NAVL+ Sbjct: 107 -ARVTSRPGQDGVVNAVLI 124
>RS8E_PYRAE (Q8ZTB8) 30S ribosomal protein S8e| Length = 131 Score = 34.3 bits (77), Expect = 0.17 Identities = 22/79 (27%), Positives = 36/79 (45%) Frame = -2 Query: 466 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGK 287 A+V P+ + + IIS+ P P + + +G++I+ V + Sbjct: 67 ANVYIPKERKSVKAKIISIISTPANPDFARRNFIVKGSVIQTEVGK-------------- 112 Query: 286 YAQVTNNPENDGCINAVLL 230 A VT+ P DG INAVL+ Sbjct: 113 -ALVTSRPGQDGVINAVLI 130
>PER_DROPS (P12348) Period circadian protein| Length = 1241 Score = 32.7 bits (73), Expect = 0.50 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Frame = +3 Query: 117 GSIPKTSMNCNTDKIALVRPDTNSALIPSTRIVSKLHTSKTALIQPSFSG---LFVT*AY 287 G+ PK N+ + P+ A IP V HT+ TA+ Q SFS LF T Y Sbjct: 940 GNKPKQQPTLNSVGVGTGAPE---APIPP---VHPTHTTHTAIAQSSFSAQQSLFPTFYY 993 Query: 288 LPQTTFPAGVTRPSSLTFT 344 +P T A P +L+ T Sbjct: 994 IPATPLAASTPAPGALSPT 1012
>RS8E_SULSO (Q980W3) 30S ribosomal protein S8e| Length = 133 Score = 32.3 bits (72), Expect = 0.65 Identities = 25/81 (30%), Positives = 34/81 (41%) Frame = -2 Query: 472 TKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVW 293 T A+V P + I+ + + P G++ RG I +E GL Sbjct: 61 TTANVLDPATNTAKKVKILEILETPANKELARRGIIIRGAKIR---TEAGL--------- 108 Query: 292 GKYAQVTNNPENDGCINAVLL 230 A VT+ P DG INAVLL Sbjct: 109 ---AVVTSRPGQDGVINAVLL 126
>PER_DROYA (Q24767) Period circadian protein| Length = 1208 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +3 Query: 201 STRIVSKLHTSKTALIQPSFS--GLFVT*AYLPQTTFPAGVTR 323 S I +H++ TA+ Q SFS GLF T Y+P + P TR Sbjct: 923 SVGITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLTPTSPTR 965
>RS8E_METMP (P61300) 30S ribosomal protein S8e| Length = 128 Score = 31.6 bits (70), Expect = 1.1 Identities = 22/64 (34%), Positives = 30/64 (46%) Frame = -2 Query: 421 IISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 242 + +V N Y V+T+G IIE T GK A+VT+ P DG +N Sbjct: 78 VTNVIDNKANKHYIRRNVMTKGAIIE---------TEMGK------AKVTSRPGQDGVVN 122 Query: 241 AVLL 230 A+LL Sbjct: 123 AILL 126
>PER_DROME (P07663) Period circadian protein (Clock-6 protein) (CLK-6)| Length = 1224 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +3 Query: 201 STRIVSKLHTSKTALIQPSFS--GLFVT*AYLPQTTFPAGVTR 323 S I +H++ TA+ Q SFS GLF T Y+P + P TR Sbjct: 942 SVGITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLTPTSPTR 984
>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)| (Auxin-responsive protein IAA24) Length = 902 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Frame = +2 Query: 203 NQNCIKASHEQDSIDTAIILRVICNLSVFAPNNF--SSRGYETKFTNIHLDNCSPRQNTK 376 N N A Q I +A + F+ +F +S G T +N+ D+CS RQN+K Sbjct: 725 NNNTSFAQDVQSQITSASF----ADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSK 780 Query: 377 RSVHWTVWVFLHRNYVEVERT 439 S + R Y +V++T Sbjct: 781 GSSWQKIATPRVRTYTKVQKT 801
>TOP2_ASFB7 (Q00942) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1192 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -2 Query: 409 KKNPNGPMYTSLGVLTRGTIIEVNVSEL-GLVTPAGKVVWGKYAQVTNNPENDGCINAV 236 K NP+GP + G+++ G +I ++ + T +G+ + + Q+TNN G + + Sbjct: 454 KSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVL 512
>TOP2_ASFM2 (P34203) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1191 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -2 Query: 409 KKNPNGPMYTSLGVLTRGTIIEVNVSEL-GLVTPAGKVVWGKYAQVTNNPENDGCINAV 236 K NP+GP + G+++ G +I ++ + T +G+ + + Q+TNN G + + Sbjct: 453 KSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVL 511
>RMT2_CANGA (Q6FMP0) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 412 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Frame = +3 Query: 93 QLDITLESGS--IPKTSMNCNTDKIALVRPDTNSALIPSTRIVSKLHTSKTALI 248 ++DI E+ + +PK +++ +T K++ V D +A P T + +KL ++ ALI Sbjct: 157 EIDICAEASAEVVPKDALDDSTGKVSSVSDDDATAADPDTYLNTKLKYTEDALI 210
>TRPE_THEMA (Q08653) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 461 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +3 Query: 294 QTTFPAG-VTRPSSLTFTSIIVPLVKTPREVYIGPFGFF-FTEIMSRLNV 437 + TFPAG V+ + II L TPR Y G G+F F + R+N+ Sbjct: 353 EATFPAGTVSGAPKVRAMEIIEELEPTPRGPYAGAVGYFSFPDDKGRMNM 402
>RS8E_HALSA (Q9HPE9) 30S ribosomal protein S8e| Length = 124 Score = 29.6 bits (65), Expect = 4.2 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = -2 Query: 421 IISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 242 I V N P Y ++T+G IIE T AG A+VT+ P DG +N Sbjct: 74 IEDVSANDANPNYARRNIITKGAIIE---------TDAGT------ARVTSRPGQDGQVN 118 Query: 241 A 239 A Sbjct: 119 A 119
>RS8E_AERPE (Q9YDY0) 30S ribosomal protein S8e| Length = 136 Score = 29.6 bits (65), Expect = 4.2 Identities = 21/79 (26%), Positives = 36/79 (45%) Frame = -2 Query: 466 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVLTRGTIIEVNVSELGLVTPAGKVVWGK 287 A V++P+ I+ + + P Y G++ +G +I+ T G+ V Sbjct: 66 AVVSNPKTGEARKARILRIVETPAHREYARRGIIVKGAVID---------TTLGRAV--- 113 Query: 286 YAQVTNNPENDGCINAVLL 230 VT+ P +G +NAVLL Sbjct: 114 ---VTSRPGQEGVVNAVLL 129
>WRK46_ARATH (Q9SKD9) Probable WRKY transcription factor 46 (WRKY DNA-binding| protein 46) Length = 295 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = +2 Query: 179 YKQCTHPFNQNCIKASHEQDSIDTAIILRVICNLSVFAPNNFSSRGYETKFT 334 Y +CTH F Q+C+ Q S DT L + L NN +S T F+ Sbjct: 126 YYRCTHRFTQDCLAVKQVQKS-DTDPSLFEVKYLGNHTCNNITSPKTTTNFS 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,923,059 Number of Sequences: 219361 Number of extensions: 1534161 Number of successful extensions: 3544 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3458 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3528 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
