ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart20e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic acyltransferase (EC 2... 84 3e-16
2DNAA_SYNEL (Q8DL93) Chromosomal replication initiator protein dnaA 35 0.18
3BCL6B_HUMAN (Q8N143) B-cell CLL/lymphoma 6 member B protein (Bcl... 35 0.18
4ALL7_ASPFU (O42799) Allergen Asp f 7 precursor 34 0.24
5ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (1... 34 0.24
6ADRM1_RAT (Q9JMB5) Adhesion-regulating molecule 1 precursor (110... 33 0.54
7ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (1... 33 0.54
8MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronc... 33 0.70
9HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1... 33 0.70
10ASPP1_HUMAN (Q96KQ4) Apoptosis stimulating of p53 protein 1 (Pro... 32 0.92
11SH3BG_MOUSE (Q9WUZ7) SH3 domain-binding glutamic acid-rich prote... 32 1.2
12FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.... 32 1.2
13UL14_HHV11 (P04291) Hypothetical UL14 protein 32 1.6
14HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2... 32 1.6
15VGP_EBOSM (Q66798) Structural glycoprotein precursor (Virion spi... 32 1.6
16LAB_DROME (P10105) Homeotic protein labial (F24) (F90-2) 32 1.6
17CP136_MYCTU (P95099) Putative cytochrome P450 136 (EC 1.14.-.-) 31 2.0
18HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3... 31 2.0
19SCM_DROME (Q9VHA0) Polycomb protein Scm (Sex comb on midleg prot... 30 3.5
20MAVS_HUMAN (Q7Z434) Mitochondrial antiviral signaling protein (I... 30 3.5
21PYC_SCHPO (Q9UUE1) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic ca... 30 3.5
22CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alph... 30 3.5
23PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-s... 30 4.5
24AQPZ_PHOLL (Q7N5C1) Aquaporin Z 30 4.5
25MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 30 4.5
26VE4_HPV5B (P26550) Probable protein E4 30 4.5
27OGFR_HUMAN (Q9NZT2) Opioid growth factor receptor (OGFr) (Zeta-t... 30 4.5
28LBR_DROME (Q8MLV1) Lamin-B receptor (dLBR) 30 5.9
29SYP2L_MOUSE (Q8BWB1) Synaptopodin 2-like protein 30 5.9
30VE4_HPV05 (P06924) Probable protein E4 30 5.9
31IE68_PRVKA (P24827) Immediate-early protein RSP40 30 5.9
32GCSH2_PSESM (Q88AR9) Glycine cleavage system H protein 2 29 7.8
33MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment) 29 7.8

>ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic acyltransferase (EC 2.3.1.153)|
           (5AT)
          Length = 469

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = +1

Query: 130 LPLTFFDVPWIFTGPVERVFFYPYPHPAEQFRAALLPRLVSSLSAALGKFYPLLGR-VRP 306
           LP+TFFD+PW+    ++ + FY +P+P   F   ++P L +SLS  L  + PL G  + P
Sbjct: 28  LPVTFFDIPWLHLNKMQSLLFYDFPYPRTHFLDTVIPNLKASLSLTLKHYVPLSGNLLMP 87

Query: 307 CPDGAGYEFFCPXXXXXXXXXVELTVAESEDDFDGLSGD---GPRDVARLYSLVPRLPVV 477
              G   +F            + L VAES+ DFD L G       D+  L+ ++PR+   
Sbjct: 88  IKSGEMPKF---QYSRDEGDSITLIVAESDQDFDYLKGHQLVDSNDLHGLFYVMPRVIRT 144

Query: 478 EDEDGGFALAAVQVTVFAGRGVAV 549
             +     L AVQVTVF  RG+AV
Sbjct: 145 MQDYKVIPLVAVQVTVFPNRGIAV 168



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>DNAA_SYNEL (Q8DL93) Chromosomal replication initiator protein dnaA|
          Length = 453

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 438 DVAGPVAGEPVEVVLALGDSELDGATTGPSSRGAEELVPGAVR 310
           DVA  + G+PVE+ LA+        +  P+SRG  E  P A R
Sbjct: 65  DVAREIVGKPVEIELAIAQGAEHDTSIRPTSRGEVEATPPAAR 107



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>BCL6B_HUMAN (Q8N143) B-cell CLL/lymphoma 6 member B protein (Bcl6-associated|
           zinc finger protein) (Zinc finger protein 62)
          Length = 480

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +2

Query: 326 TSSSAPREEGPVVAPSSSLSPRARTT--STGSPATGP 430
           +SSS+  EEGP+  P S LSP A T     G+PA+ P
Sbjct: 239 SSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTP 275



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>ALL7_ASPFU (O42799) Allergen Asp f 7 precursor|
          Length = 270

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +2

Query: 332 SSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGST 451
           S+AP  E P   P+++ +P   TT+  +P+  PA + GST
Sbjct: 115 SAAPIPEEPAPQPATTAAPSTSTTTQAAPSAPPAANSGST 154



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>ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110) (ARM-1)
          Length = 407

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +2

Query: 326 TSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGSTRS 457
           +SSS+ R +   V PSSS S    T +  +PA   ATSP    S
Sbjct: 204 SSSSSSRSQSAAVTPSSSTSSARATPAPSAPAAASATSPSPAPS 247



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>ADRM1_RAT (Q9JMB5) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110)
          Length = 407

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 326 TSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGSTRS 457
           +SSS+ R +   V PSS+ S    T +  +PA   ATSP    S
Sbjct: 204 SSSSSSRSQSAAVTPSSTTSSARATPAPSAPAAASATSPSPAPS 247



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>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110)
          Length = 407

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 326 TSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGSTRS 457
           +SSS+ R +   V PSS+ S    T +  +PA   ATSP    S
Sbjct: 204 SSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPS 247



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>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)|
           (Tracheobronchial mucin) (TBM) (Major airway
           glycoprotein) (Fragment)
          Length = 1233

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 326 TSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGSTRS 457
           TS+++         P +SLSP   T++T +P T   + PG+T S
Sbjct: 106 TSTTSASTASTTSGPGTSLSPVPTTSTTSAPTTSTTSGPGTTPS 149



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>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
 Frame = +1

Query: 244 LVSSLSAALGKFYPLLGRVRPCPDGAGYEFFCPXXXXXXXXXVELTVAESEDDFDGLSGD 423
           L+ +LS AL  FYP+ GR++   +G  YE  C              V E   DF      
Sbjct: 67  LIEALSKALVPFYPMAGRLK--INGDRYEIDCNAEGALFVEAESSHVLEDFGDF------ 118

Query: 424 GPRDVARLYSLVPRLPVVEDEDG--GFALAAVQVTVFAGRGVAVG 552
            P D   L+ ++  +P  +   G   F L  VQ+T F   GV++G
Sbjct: 119 RPND--ELHRVM--VPTCDYSKGISSFPLLMVQLTRFRCGGVSIG 159



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>ASPP1_HUMAN (Q96KQ4) Apoptosis stimulating of p53 protein 1 (Protein|
           phosphatase 1 regulatory subunit 13B)
          Length = 1090

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = +2

Query: 326 TSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGSTR 454
           TSS   R+EG +  PS+ L  R R T    PATG    PGS++
Sbjct: 476 TSSLERRKEGSLPRPSAGLPSRQRPTLL--PATGSTPQPGSSQ 516



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>SH3BG_MOUSE (Q9WUZ7) SH3 domain-binding glutamic acid-rich protein (SH3BGR|
           protein)
          Length = 214

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 1/102 (0%)
 Frame = -1

Query: 348 SRGAEELVPGAVRAGPDAAEEGVELAQRXXXXXXXXXXXXXXELLGRVRVRVEEDALHGA 169
           S  A  L  G V    + A EG E A++                L   + + EE+     
Sbjct: 108 SEEASSLPNGDVAGEAEGAAEGTEKAEKSGENEAQKEDSEDTGELSESQEKKEEE----- 162

Query: 168 GEDPGHVEEGERQRAAAAPRRDGERVEDP-GGHGKELDSRSP 46
           GED    EEGE +         GE  E P  G G E +   P
Sbjct: 163 GEDGEEGEEGEEREEGGEGETTGETEEAPEEGAGGEAEEEEP 204



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>FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.13.3)|
          Length = 777

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 27/104 (25%), Positives = 44/104 (42%)
 Frame = -1

Query: 417 GEPVEVVLALGDSELDGATTGPSSRGAEELVPGAVRAGPDAAEEGVELAQRXXXXXXXXX 238
           G+ V++V+   D  +D +  G        L+  +V  G ++ +   +L +          
Sbjct: 345 GKEVDLVIENADIGVDRSMLGDVRDALVHLLRNSVDHGVESPDTRQQLGKPLNGRI---- 400

Query: 237 XXXXXELLGRVRVRVEEDALHGAGEDPGHVEEGERQRAAAAPRR 106
                    R+RVRV+ D LH   ED G   + ER R AA  +R
Sbjct: 401 ---------RIRVRVDGDMLHIEVEDDGRGIDPERLRQAAISKR 435



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>UL14_HHV11 (P04291) Hypothetical UL14 protein|
          Length = 219

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +2

Query: 341 PREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGS 448
           P   GP  AP++ LS   RT  + +P TGPAT P S
Sbjct: 175 PTPTGPPGAPAAPLS---RTPPSPAPPTGPATDPAS 207



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>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2)
          Length = 446

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
 Frame = +1

Query: 244 LVSSLSAALGKFYPLLGRVRPCPDGAGYEFFCPXXXXXXXXXVELTVAESEDDFDGLSGD 423
           L+ +LS AL  +YP+ GR++   +G  YE  C              V E   DF      
Sbjct: 67  LIEALSKALVPYYPMAGRLK--INGDRYEIDCNAEGALFVEAESSHVLEDFGDF------ 118

Query: 424 GPRDVARLYSLVPRLPVVEDEDG--GFALAAVQVTVFAGRGVAVG 552
            P D   L+ ++  +P  +   G   F L  VQ+T F   GV++G
Sbjct: 119 RPND--ELHRVM--VPTCDYSKGISSFPLLMVQLTRFRCGGVSIG 159



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>VGP_EBOSM (Q66798) Structural glycoprotein precursor (Virion spike|
           glycoprotein) [Contains: GP1; GP2]
          Length = 676

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +2

Query: 323 GTSSSAPREEGPVVAPS------SSLSPRARTTSTGSPATGPATSPGST 451
           G SSS      P +APS      ++ +P+    +T  P T P  SPGST
Sbjct: 404 GLSSSQILSSSPTMAPSPETQTSTTYTPKLPVMTTEEPTTPPRNSPGST 452



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>LAB_DROME (P10105) Homeotic protein labial (F24) (F90-2)|
          Length = 635

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +2

Query: 344 REEGPVVAPSSSLSPRARTTSTGSPATGPATSPGSTRSCRGFRWLRMR 487
           ++ G V++P SS S     ++   PA+  + SP  + S   ++W++++
Sbjct: 351 QQRGGVISPGSSTSSSTSASNGAHPASTQSKSPNHSSSIPTYKWMQLK 398



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>CP136_MYCTU (P95099) Putative cytochrome P450 136 (EC 1.14.-.-)|
          Length = 492

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
 Frame = -1

Query: 486 LILNHRKPRHERVEP----------GDVAGPVAGEPVEVVLALGDSELD-GATTGPSSRG 340
           ++LN + P  +  EP          GD   P+ G  +E++    D  +    T GP   G
Sbjct: 34  MLLNTKFPEKKLAEPPPGSGLKPVVGDAGLPILGHMIEMLRGGPDYLMFLYKTKGPVVFG 93

Query: 339 AEELVPGAVRAGPDAAE 289
              ++PG    GPDAA+
Sbjct: 94  DSAVLPGVAALGPDAAQ 110



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>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3)
          Length = 445

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
 Frame = +1

Query: 244 LVSSLSAALGKFYPLLGRVRPCPDGAGYEFFCPXXXXXXXXXVELTVAESEDDFDGLSGD 423
           L+ +LS AL  +YP+ GR++   +G  YE  C              V E   DF      
Sbjct: 67  LIEALSKALVPYYPMAGRLK--INGDRYEIDCNGEGALFVEAESSHVLEDFGDF------ 118

Query: 424 GPRDVARLYSLVPRLPVVEDEDG--GFALAAVQVTVFAGRGVAVG 552
            P D   L+ ++  +P  +   G   F L  VQ+T F   GV++G
Sbjct: 119 RPND--ELHRVM--VPTCDYSKGISSFPLLMVQLTRFRCGGVSIG 159



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>SCM_DROME (Q9VHA0) Polycomb protein Scm (Sex comb on midleg protein)|
          Length = 877

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = +2

Query: 323 GTSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGSTRSCRG 466
           G++S+AP   G     +SS S  A +TST S + G  TSP ST+  RG
Sbjct: 12  GSNSAAP---GASTNATSSASASASSTST-SASPGSTTSPASTQRQRG 55



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>MAVS_HUMAN (Q7Z434) Mitochondrial antiviral signaling protein (Interferon-beta|
           promoter stimulator protein 1) (IPS-1) (Virus-induced
           signaling adapter) (CARD adapter inducing
           interferon-beta) (Cardif) (Putative
           NF-kappa-B-activating protein 031N)
          Length = 540

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/43 (44%), Positives = 22/43 (51%)
 Frame = +2

Query: 323 GTSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGST 451
           G +SS     GPV +PS S  P AR+T   S   GP  S  ST
Sbjct: 209 GATSSLTPSRGPV-SPSVSFQPLARSTPRASRLPGPTGSVVST 250



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>PYC_SCHPO (Q9UUE1) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)|
            (PCB)
          Length = 1185

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/76 (27%), Positives = 36/76 (47%)
 Frame = -1

Query: 531  GEHGHLDGREREPAVLILNHRKPRHERVEPGDVAGPVAGEPVEVVLALGDSELDGATTGP 352
            GE+ H+   +++ A+  +   +PR +   PG VA P++G  VE+ +  G     G     
Sbjct: 1087 GENRHVTVEDKKAAIETVT--RPRADPGNPGHVAAPMSGTIVEIRVKEGAKVKKGDIIAV 1144

Query: 351  SSRGAEELVPGAVRAG 304
             S    E+V  A  +G
Sbjct: 1145 LSAMKMEIVISAPHSG 1160



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>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.3)
            (CaVT.3)
          Length = 2201

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +2

Query: 356  PVVAPSSSLSPRARTTSTGSPATGPATSPGSTRSCRG 466
            P   P   L+P  +  ST S A GP   PGST S RG
Sbjct: 2118 PPTLPPPGLTPARKFNSTSSLAAGPG-RPGSTVSARG 2153



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>PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2364

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
 Frame = -1

Query: 438  DVAGPVAGEPVEV-VLALGDSELDGATTGP----SSRGAEELVPGAVRAGPDAAEEGVE- 277
            D++G  +GE   + + A G  +L G  +G     S+ G E+L+      GP+ +  GVE 
Sbjct: 1073 DISGLPSGEEGHLEISASGVEDLSGIPSGEGPEVSASGVEDLIGLPSGEGPEVSASGVED 1132

Query: 276  LAQRXXXXXXXXXXXXXXELLGRVRVRVEEDALHGAGEDPGHVEEGERQRAAAAPRRDGE 97
            L++               +L G       E ++ G  ED   +  GE    +A+   D  
Sbjct: 1133 LSRLPSGEGPEVSASGVEDLSGLPSGEGPEVSVSGV-EDLSRLPSGEGPEVSASGVEDLS 1191

Query: 96   RVEDPGGHGKEL 61
            R+  P G G E+
Sbjct: 1192 RL--PSGEGPEI 1201



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>AQPZ_PHOLL (Q7N5C1) Aquaporin Z|
          Length = 231

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
 Frame = -1

Query: 522 GHLDGREREPAVLILNHRKPRHERVEP-----GDVAGPVAGEPVEVVLALGDSELDGATT 358
           GH+ G    PAV I      R   VE        V G +    V  V+A G    D  T+
Sbjct: 55  GHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLYVIASGQVGFDATTS 114

Query: 357 GPSSRGAEELVPG 319
           G +S G  E  PG
Sbjct: 115 GFASNGFGEHSPG 127



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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +2

Query: 326  TSSSAPREEGPVVAPSSSLS-----PRARTTSTGSPATGPATSPGST 451
            T+++ P   G +  PSSS       P   TT+T   ATG  T+P ST
Sbjct: 3862 TTTTQPVATGSMATPSSSTQTSGTPPSLITTATTITATGSTTNPSST 3908



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>VE4_HPV5B (P26550) Probable protein E4|
          Length = 245

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +2

Query: 341 PREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGSTRS 457
           P EEG    P +S   R R+     P TGP   PG   S
Sbjct: 58  PEEEGTDGGPPASQGDRKRSKGDQGPDTGPGLGPGRAPS 96



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>OGFR_HUMAN (Q9NZT2) Opioid growth factor receptor (OGFr) (Zeta-type opioid|
           receptor) (7-60 protein)
          Length = 677

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 323 GTSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPG 445
           G S + P  + P  +PS +  PR    +   PA  P+ +PG
Sbjct: 583 GPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPG 623



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 323 GTSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPG 445
           G S + P  + P  +PS +  PR    +   PA  P+ +PG
Sbjct: 523 GPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 563



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>LBR_DROME (Q8MLV1) Lamin-B receptor (dLBR)|
          Length = 741

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 335 SAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGSTRS 457
           ++P     V  PS  L PR R +S    + GP T  GS  S
Sbjct: 84  ASPSRNKVVAPPSPDLGPRTRRSSRPRSSVGPLTGSGSGSS 124



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>SYP2L_MOUSE (Q8BWB1) Synaptopodin 2-like protein|
          Length = 975

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 17/42 (40%), Positives = 18/42 (42%)
 Frame = +2

Query: 323 GTSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSPGS 448
           G SSS  R  GPV A SS   P      T   A  P T P +
Sbjct: 531 GASSSTQRSSGPVTATSSLYIPAPSRPVTPGGAPEPPTPPSA 572



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>VE4_HPV05 (P06924) Probable protein E4|
          Length = 245

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 341 PREEGPVVAPSSSLSPRARTTSTGSPATGPATSPG 445
           P EEG    P +S   R R+     P TGP   PG
Sbjct: 58  PEEEGTDGGPPASQGDRKRSKGDQGPDTGPGLGPG 92



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>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/43 (37%), Positives = 18/43 (41%)
 Frame = -1

Query: 192 EEDALHGAGEDPGHVEEGERQRAAAAPRRDGERVEDPGGHGKE 64
           +ED      ED G  EE E          DGE  ED  G G+E
Sbjct: 302 DEDEDEDEDEDDGEDEEDEEGEDGGEDGEDGEEDEDEDGEGEE 344



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>GCSH2_PSESM (Q88AR9) Glycine cleavage system H protein 2|
          Length = 128

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -1

Query: 438 DVAGPVAGEPVEVVLALGDSELDGATTGPSSRGAEELVPGAVRAGPDAAE 289
           D+  PVAGE VEV  ALGDS        P S  +E       +  P +AE
Sbjct: 69  DIYSPVAGEVVEVNEALGDS--------PESLNSEPYSAWIFKVKPASAE 110



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>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)|
          Length = 1513

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +2

Query: 326  TSSSAPREEGPVVAPSSSLSPRARTTSTGSPATGPATSP 442
            TS+++P         S + SP   TTST SP T P TSP
Sbjct: 1471 TSTTSPTPSPTTSTTSPTPSP---TTSTTSPTTSPITSP 1506


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,304,377
Number of Sequences: 219361
Number of extensions: 1103932
Number of successful extensions: 5899
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5858
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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