>PSA5_ORYSA (Q9LSU1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S|
           proteasome alpha subunit E) (20S proteasome subunit
           alpha-5)
          Length = 237

 Score =  109 bits (272), Expect = 5e-24
 Identities = 55/59 (93%), Positives = 57/59 (96%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 352
           LQEQYNKELT+ EAETIALSILKQVMEEKVTPNNVDIA VSP+YHLYTPAEVEAVIARL
Sbjct: 179 LQEQYNKELTLQEAETIALSILKQVMEEKVTPNNVDIAKVSPNYHLYTPAEVEAVIARL 237

>PSA5_SOYBN (Q9M4T8) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S|
           proteasome alpha subunit E) (20S proteasome subunit
           alpha-5)
          Length = 237

 Score =  103 bits (256), Expect = 4e-22
 Identities = 50/59 (84%), Positives = 57/59 (96%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 352
           LQEQ+NK+LT+ EAETIALSILKQVMEEKVTPNNVDIA V+P+YHLYTP+EVEAVI+RL
Sbjct: 179 LQEQFNKDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL 237

>PSA5A_ARATH (O81149) Proteasome subunit alpha type 5-A (EC 3.4.25.1) (20S|
           proteasome alpha subunit E-1)
          Length = 237

 Score =  100 bits (250), Expect = 2e-21
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 352
           LQEQ+NK+L++ EAETIA+SILKQVMEEKVTPNNVDIA V+P+YHLYTP EVEAVIARL
Sbjct: 179 LQEQFNKDLSLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVIARL 237

>PSA5B_ARATH (Q42134) Proteasome subunit alpha type 5-B (EC 3.4.25.1) (20S|
           proteasome alpha subunit E-2) (Proteasome component Z)
          Length = 237

 Score =  100 bits (249), Expect = 2e-21
 Identities = 48/59 (81%), Positives = 56/59 (94%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 352
           LQEQ+NK++T+ EAETIA+SILKQVMEEKVTPNNVDIA V+P+YHLYTP EVEAVI+RL
Sbjct: 179 LQEQFNKDITLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVISRL 237

>PSA5_MOUSE (Q9Z2U1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome|
           zeta chain) (Macropain zeta chain) (Multicatalytic
           endopeptidase complex zeta chain)
          Length = 241

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVI 361
           LQE Y+K +T+ EA   +L ILKQVMEEK+   N+++A V P  ++H++T  E+E VI
Sbjct: 181 LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238

>PSA5_HUMAN (P28066) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome|
           zeta chain) (Macropain zeta chain) (Multicatalytic
           endopeptidase complex zeta chain)
          Length = 241

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVI 361
           LQE Y+K +T+ EA   +L ILKQVMEEK+   N+++A V P  ++H++T  E+E VI
Sbjct: 181 LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238

>PSA5_RAT (P34064) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome|
           zeta chain) (Macropain zeta chain) (Multicatalytic
           endopeptidase complex zeta chain)
          Length = 241

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVI 361
           LQE Y+K  T+ EA   +L ILKQVMEEK+   N+++A V P  ++H++T  E+E VI
Sbjct: 181 LQEVYHKSTTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238

>PSA5_ENTHI (Q94561) Proteasome subunit alpha type 5 (EC 3.4.25.1)|
          Length = 247

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVS---PSYHLYTPAEVEAVIA 358
           L E+YNK +T+ EAE +ALS LKQVMEEK+   NV++A V+     + +   A +E +I 
Sbjct: 181 LHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDTAFIENLIG 240

Query: 357 RL 352
            +
Sbjct: 241 EI 242

>PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC 3.4.25.1)|
          Length = 247

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVIAR 355
           L ++++K++T+ EAE + L +L+QVMEEK+   NV +A V+    +H+Y   E+   +AR
Sbjct: 182 LVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEGGFHIYNDEEMADAVAR 241

>PSA5_TRYBB (Q9XZG5) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S|
           proteasome subunit alpha-5)
          Length = 246

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
 Frame = -1

Query: 522 EQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPS---YHLYTPAEVEAVIAR 355
           E+Y++ +T+ EAE + + IL+QVMEEK+T  +V+IA V  S     +Y   +++ +I R
Sbjct: 183 ERYHRNMTVEEAENLTVQILRQVMEEKLTKTSVEIAIVPVSTGRLQIYDQEQIQRIIDR 241

>PSA5_CAEEL (Q95008) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome|
           subunit alpha 5)
          Length = 248

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPS 400
           L+EQY+  LTI E   +AL+ILKQVMEEK+   NV++  + P+
Sbjct: 180 LKEQYHDALTIKEGLKMALAILKQVMEEKLNSANVEVVVIKPT 222

>PSA5_DROME (Q95083) Proteasome subunit alpha type 5 (EC 3.4.25.1)|
          Length = 244

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVIAR 355
           LQ+ +  +LT+ EA  I+L+ LKQVMEEK+   NV++  ++    ++++T  EVE  I  
Sbjct: 183 LQDLFRPDLTLDEAIDISLNTLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKN 242

Query: 354 L 352
           +
Sbjct: 243 I 243

>PSA5_YEAST (P32379) Proteasome component PUP2 (EC 3.4.25.1) (Macropain subunit|
           PUP2) (Proteinase YSCE subunit PUP2) (Multicatalytic
           endopeptidase complex subunit PUP2)
          Length = 260

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVMEEKVTPNNVDIANVS 406
           L  +++  LT+ EAE + L ILKQVMEEK+  NN  ++ ++
Sbjct: 183 LLNEWHSSLTLKEAELLVLKILKQVMEEKLDENNAQLSCIT 223

>SERA_BOVIN (Q5EAD2) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)|
          Length = 532

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +1

Query: 271 AYENSDATTWQALLSLQEA---VSQSGNPSQPRDDRFNLCRSVEVVAGGDIRNVNIVWG 438
           A + S+     A+L ++EA   V+ S NP+ PR+  F  C     +AG   + V +V G
Sbjct: 381 ASQQSNVNLVNAMLLVKEAGLDVTTSHNPATPREQDFGECLLTVALAGAPYQAVGLVQG 439

>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 213

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 13/60 (21%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = -1

Query: 528 LQEQYNKELTIAEAETIALSILKQVME-EKVTPNNVDIANVSPS-YHLYTPAEVEAVIAR 355
           L++++  E+ + EA  +A+  +   M+ +  + + +D+  ++   ++ Y+P EVE ++A+
Sbjct: 151 LEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDEFYQYSPEEVEQILAK 210

>HISX1_RHILO (Q989E7) Histidinol dehydrogenase 1 (EC 1.1.1.23) (HDH 1)|
          Length = 430

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +1

Query: 226 VQRLSATVNKRMTGLAYENSDATTWQALLSLQEAVSQSGNPSQPRDDRFNLCRSVEV 396
           ++ L   V+K+    AYE +D    +AL   ++ +       +P+DDR+     VE+
Sbjct: 61  LKSLGIAVSKQDIAAAYETADPKAIEALEFARDRIRSHHERQRPKDDRYTDATGVEL 117

>AMPM_MANSE (Q11001) Membrane alanyl aminopeptidase precursor (EC 3.4.11.-)|
           (Aminopeptidase N-like protein) (CryIA(C) receptor)
           (Fragment)
          Length = 990

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +1

Query: 250 NKRMTGLAYENSDATTW----QALLSLQEAVSQSGNPSQPRDDRFNLCRS 387
           NK+++G    N D TTW    +AL S    V    + SQ  DD F L RS
Sbjct: 596 NKQVSGFYRVNYDNTTWGLITRALRSANRTVIHELSRSQIVDDVFQLARS 645

>FUMC_BACHD (Q9KCX4) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)|
          Length = 462

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +1

Query: 217 FLVVQRLSATVNKRMTGLAYENSDATTWQA 306
           F ++++ +A VNK++  L+ E +DA TW A
Sbjct: 47  FALLKKAAANVNKKLGQLSAEKADAITWAA 76

>AMPN_PLUXY (P91887) Aminopeptidase N precursor (EC 3.4.11.2) (Microsomal|
           aminopeptidase) (APN1)
          Length = 946

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +1

Query: 247 VNKRMTGLAYENSDATTWQAL---LSLQEAVSQSGNPSQPRDDRFNLCRS 387
           VNK+ TG    N D   W+AL   L+    +    N +Q  DD FNL R+
Sbjct: 580 VNKQQTGYYRVNYDPENWRALAKVLNDTHEIIHLLNRAQLIDDSFNLARN 629

>ARGD_MYXXA (P59318) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 401

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -1

Query: 495 AEAETIALSILKQVMEEKVTPNNVDIANVSPSYHLYTPAEVEA 367
           AEA    L + ++VM+++ TP   ++ +   S+H  T A V A
Sbjct: 122 AEANEALLKLTRKVMKDRGTPERFEVISFDSSFHGRTLATVTA 164

>ATG2_MAGGR (Q51ZN8) Autophagy-related protein 2|
          Length = 2077

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +1

Query: 229  QRLSATVNKRMTGLAYENSDATTWQALLSLQEAVSQSGNPSQPRDDRFNLCRSVEVVAGG 408
            + LS  +N+ + G+   N   T   A  +     S+ G PS+P+  R  L RS       
Sbjct: 1607 RELSQNINQELYGI---NPSDTESVATTAFTTTTSRMGGPSRPKGKRLKLTRSKHHKITF 1663

Query: 409  DIRNVNIV 432
            ++  VN V
Sbjct: 1664 ELSGVNAV 1671

>RBM16_HUMAN (Q9UPN6) Putative RNA-binding protein 16 (RNA-binding motif protein|
            16)
          Length = 1271

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 517  VQQGIDNR*GRDHSPFYPEAGYGRKGD 437
            V+ GID+   RDH  F PE  +G +GD
Sbjct: 1072 VRPGIDHLGRRDHFGFNPEKPWGHRGD 1098

>ZFAN1_MOUSE (Q8BFR6) AN1-type zinc finger protein 1|
          Length = 268

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 405 GRHSQCQHCLGSPFLP*PASG*KGLWSLPQR 497
           G+H Q QHC    FLP    G  G++ L  R
Sbjct: 7   GQHCQVQHCRQRDFLPFVCDGCSGIFCLEHR 37


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,332,950
Number of Sequences: 219361
Number of extensions: 1617550
Number of successful extensions: 3800
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3800
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)