ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart20d09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT019190.1| Zea mays clone Contig862.F mRNA sequence Length = 1161 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 348 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 407 |||||| |||||||||||| ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 341 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttggggg 400 Query: 408 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 467 || || ||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 401 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacctgcttcagga 460 Query: 468 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactg 519 ||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 461 tagaaagggctatggtctccgcctcctggagggtcaattccttgttgtactg 512
>gb|BT017580.1| Zea mays clone EL01N0429D12.c mRNA sequence Length = 1354 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 348 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 407 |||||| |||||||||||| ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 1121 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttggggg 1062 Query: 408 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 467 || || ||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1061 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacctgcttcagga 1002 Query: 468 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactg 519 ||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 1001 tagaaagggctatggtctccgcctcctggagggtcaattccttgttgtactg 950
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 167 bits (84), Expect = 5e-38 Identities = 150/172 (87%) Strand = Plus / Minus Query: 348 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 407 |||||| |||||||||||| ||||| ||||| ||||| |||||||||||||| |||| | Sbjct: 1014 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttgggag 955 Query: 408 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 467 || || ||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 954 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacctgcttcagga 895 Query: 468 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactg 519 ||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 894 tagaaagggctatggtctccgcctcctggagggtcaattccttgttgtactg 843
>dbj|AK103487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M12, full insert sequence Length = 1188 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 349 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 408 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 907 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 848 Query: 409 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcaggat 468 || || || || || || |||||||| || ||||||||||||||||||||||||| ||| Sbjct: 847 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacctgcttcaagat 788 Query: 469 agaaagggctatggtctctgcctc 492 ||| |||||||||||||| ||||| Sbjct: 787 agacagggctatggtctcagcctc 764
>dbj|AK059521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C07, full insert sequence Length = 1056 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 349 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 408 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 802 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 743 Query: 409 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcaggat 468 || || || || || || |||||||| || ||||||||||||||||||||||||| ||| Sbjct: 742 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacctgcttcaagat 683 Query: 469 agaaagggctatggtctctgcctc 492 ||| |||||||||||||| ||||| Sbjct: 682 agacagggctatggtctcagcctc 659
>dbj|AB026561.1| Oryza sativa (japonica cultivar-group) OsPAE1 mRNA for alpha 5 subunit of 20S proteasome, complete cds Length = 1056 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 349 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 408 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 807 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 748 Query: 409 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcaggat 468 || || || || || || |||||||| || ||||||||||||||||||||||||| ||| Sbjct: 747 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacctgcttcaagat 688 Query: 469 agaaagggctatggtctctgcctc 492 ||| |||||||||||||| ||||| Sbjct: 687 agacagggctatggtctcagcctc 664
>gb|BT017253.1| Zea mays clone EL01N0307H03.c mRNA sequence Length = 1104 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Minus Query: 348 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 407 |||||| ||||||||| || ||||| ||||| ||||| |||||||||||||| |||| | Sbjct: 911 ttcacagcctcgcgatcacggcttcgacctcggcaggggtgtagaggtggtacttgggag 852 Query: 408 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 467 || || ||||| || || ||||||||||||||||| || ||||||||||||||||| | Sbjct: 851 caaccttggcaatatcgacgttgtttggggtcaccttctcctccataacctgcttcagaa 792 Query: 468 tagaaagggctatggtctctgcctc 492 ||||||||||||||||||| ||||| Sbjct: 791 tagaaagggctatggtctccgcctc 767
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| ||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct: 1673 gtatagattcactcattttgctccgtatgtagtctcctagtgaaatacctaaaaggtctt 1614 Query: 64 atatttaggaaccgatggagta 85 |||||| ||||| || |||||| Sbjct: 1613 atattttggaacggagggagta 1592 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||||||| |||||||||| |||||||||||| | | | ||||| |||||||||||| Sbjct: 142772 gtataaattaactcattttgttccgtatgtagtctccgaatgaaatacctaaaaggtctt 142831 Query: 64 atatttaggaaccgatggagtaca 87 |||||| ||||| |||||| |||| Sbjct: 142832 atattttggaacggatggattaca 142855 Score = 58.0 bits (29), Expect = 3e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||||| |||| || |||||||||||||||||||||||||| || ||||| Sbjct: 1695 tccgtatgtagttta-tagtacaatctctaaaaggtcttatatttaggaacggagggagt 1753 Query: 85 a 85 | Sbjct: 1754 a 1754 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 222 attcactcattttgctccgtatgtagt 196 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||| |||||||||| ||||||||| |||||||||| | || ||| | ||||||||| Sbjct: 194425 attcaatcattttgcttcgtatgtagacatctagtgaaatcgcttaaaagacttatattt 194484 Query: 70 aggaac 75 |||||| Sbjct: 194485 aggaac 194490 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgtagt 36 ||||| |||||||||||||||| |||||||||| Sbjct: 217268 gtatagattcactcattttgcttcgtatgtagt 217236 Score = 44.1 bits (22), Expect = 0.46 Identities = 49/58 (84%) Strand = Plus / Minus Query: 29 tatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagtac 86 |||||||| || || | ||| |||||||||||||||||||| |||| || ||||||| Sbjct: 217225 tatgtagtcttttaataaaatctctaaaaggtcttatattttagaacggagggagtac 217168 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/53 (86%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactct--aaaaggtcttatatttaggaac 75 |||||||||||| || |||||||| |||| |||| | ||||||||||||||| Sbjct: 143280 tccgtatgtagtcttgtagtgaaacctctaaaaaaagacttatatttaggaac 143332 Score = 40.1 bits (20), Expect = 7.1 Identities = 43/48 (89%), Gaps = 2/48 (4%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaact-ctaaaaggtcttatatttag 71 |||||||||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 190812 tccgtatgtagtttcctaatgaaaacttctaaaaga-cttatatttag 190766
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| |||| |||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 5721 gtatagattcgctcattttgctccgtatgtagtcttctagtgaaatacctaaaaggtctt 5662 Query: 64 atatttaggaaccgatggagta 85 |||||| ||||| || |||||| Sbjct: 5661 atattttggaacggagggagta 5640 Score = 58.0 bits (29), Expect = 3e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||||| |||| || |||||||||||||||||||||||||| || ||||| Sbjct: 5743 tccgtatgtagttta-tagtacaatctctaaaaggtcttatatttaggaacggagggagt 5801 Query: 85 a 85 | Sbjct: 5802 a 5802
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 89.7 bits (45), Expect = 9e-15 Identities = 72/81 (88%) Strand = Plus / Plus Query: 5 tataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctta 64 |||| ||||||||||||||||||||||||||| ||||| |||| |||||||| | |||| Sbjct: 76895 tatagattcactcattttgctccgtatgtagtcgtctagcgaaatctctaaaaagactta 76954 Query: 65 tatttaggaaccgatggagta 85 ||||||||||| || |||||| Sbjct: 76955 tatttaggaacggagggagta 76975 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| ||||| |||||||||||||||| |||| | ||| ||||| | |||||||||||| Sbjct: 23132 gtatatattcattcattttgctccgtatatagtctcctaatgaaatccctaaaaggtctt 23191 Query: 64 atatttaggaaccgatggagtaca 87 |||||| |||| || |||||||| Sbjct: 23192 atattttagaacggagggagtaca 23215 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||| ||||||| | ||||||||| |||||||| | ||||||||||||||| || ||||| Sbjct: 76872 tccgaatgtagtctactagtgaaacctctaaaaagacttatatttaggaacggagggagt 76813 Query: 85 aca 87 ||| Sbjct: 76812 aca 76810 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||| |||||||||||||||||||| || |||| ||| | || ||| | ||||||||| Sbjct: 29922 attcaatcattttgctccgtatgtagattcttagtaaaatcgcttaaaagacttatattt 29981 Query: 70 aggaaccgatggagta 85 || ||| ||||||||| Sbjct: 29982 agaaacggatggagta 29997 Score = 44.1 bits (22), Expect = 0.46 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 ||||||||||| ||| |||| || || ||||||||||||||||||| ||| || ||||| Sbjct: 23110 tccgtatgtag-tttatagtacaatctttaaaaggtcttatatttagaaacggagggagt 23052 Query: 85 ac 86 || Sbjct: 23051 ac 23050 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 29 tatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 85 ||||||||| ||||| ||| |||||||| | ||||||||||| ||| || |||||| Sbjct: 29890 tatgtagttcactagtaaaacctctaaaaagacttatatttagaaacggagggagta 29834
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||| Sbjct: 10474 attcactcattttgctccgtatgtagtcttttaatgaaatctctaaaaggtcttatattt 10533 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 51 tctaaaaggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||||||||| || |||||| Sbjct: 10421 tctaaaaggtcttatatttaggaacggagggagta 10387
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 85.7 bits (43), Expect = 1e-13 Identities = 71/79 (89%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 7 taaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttata 66 ||||||||||||||||||||||||||||| | | |||||||| | |||||||||||||| Sbjct: 66690 taaattcactcattttgctccgtatgtag-tctatagtgaaatttgtaaaaggtcttata 66748 Query: 67 tttaggaaccgatggagta 85 ||||||||| || |||||| Sbjct: 66749 tttaggaacggagggagta 66767 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||||| |||||| | |||||||||||||||||||||||||| || ||||| Sbjct: 66665 tccgtatgtagttta-tagtgagatctctaaaaggtcttatatttaggaacggagggagt 66607 Query: 85 a 85 | Sbjct: 66606 a 66606 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||| ||||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 89246 tccgtatgtagtccactagtgaaatctctagaaagacttatatttaggaacggagggagt 89305 Query: 85 ac 86 || Sbjct: 89306 ac 89307 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| ||||| | |||||||||||||||||| | |||| ||| ||||||| | ||| Sbjct: 81217 gtatagattcatttattttgctccgtatgtagccctttagtaaaatttctaaaaagactt 81158 Query: 64 atatttaggaaccgatggagta 85 |||||||||||| || |||||| Sbjct: 81157 atatttaggaacggagggagta 81136 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||| ||||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 14550 tccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagt 14491 Query: 85 a 85 | Sbjct: 14490 a 14490 Score = 48.1 bits (24), Expect = 0.029 Identities = 60/72 (83%) Strand = Plus / Plus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| ||||| |||||||||||||||||||| | |||||||| || ||| | ||| Sbjct: 14572 gtatagattcaatcattttgctccgtatgtagacctttagtgaaattgcttaaaagactt 14631 Query: 64 atatttaggaac 75 |||||||||||| Sbjct: 14632 atatttaggaac 14643 Score = 44.1 bits (22), Expect = 0.46 Identities = 67/82 (81%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| ||||| |||||||||||| ||||||| |||||||| | || ||| | ||| Sbjct: 89224 gtatagattcaatcattttgctccatatgtagacccttagtgaaatcgcttaaaagactt 89165 Query: 64 atatttaggaaccgatggagta 85 |||||||||||| || |||||| Sbjct: 89164 atatttaggaacggagggagta 89143
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||| Sbjct: 5447 gtatagattcactcattttgcttcgtatgtagtcttctagtgaaattcctaaaaggtctt 5506 Query: 64 atatttaggaa 74 |||||| |||| Sbjct: 5507 atattttggaa 5517 Score = 58.0 bits (29), Expect = 3e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||||| |||| || |||||||||||||||||||||||||| || ||||| Sbjct: 5425 tccgtatgtagttta-tagtataatctctaaaaggtcttatatttaggaacggagggagt 5367 Query: 85 a 85 | Sbjct: 5366 a 5366 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||| | ||||||||||| |||| || | ||||||||||||||| || ||||| Sbjct: 21917 tccgtatgtaatcttctagtgaaatctctttaaagacttatatttaggaacagagggagt 21858 Query: 85 a 85 | Sbjct: 21857 a 21857 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 41 tagtgaaaactctaaaaggtcttatatttagga 73 |||||||| |||||||| | ||||||||||||| Sbjct: 21976 tagtgaaatctctaaaaagacttatatttagga 22008
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 440 accttttcttccataacctgcttcaggatagaaagggctatggtctctgcctc 492 ||||||||||||||||||||||||| |||||| |||||||||||||| ||||| Sbjct: 100678 accttttcttccataacctgcttcaagatagacagggctatggtctcagcctc 100730 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 349 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 405 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 100488 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 100544
>gb|AY785888.1| Hordeum vulgare subsp. vulgare cultivar Optic HvCBF10B (CBF10B) mRNA, complete cds Length = 1041 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 5 tataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctta 64 |||| ||| ||||||||| || |||||||||||||||| ||||| ||||||||||||||| Sbjct: 987 tatagatttactcattttactacgtatgtagttttctactgaaatctctaaaaggtctta 928 Query: 65 tattt 69 ||||| Sbjct: 927 tattt 923
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 440 accttttcttccataacctgcttcaggatagaaagggctatggtctctgcctc 492 ||||||||||||||||||||||||| |||||| |||||||||||||| ||||| Sbjct: 23084675 accttttcttccataacctgcttcaagatagacagggctatggtctcagcctc 23084727 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 349 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 405 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 23084485 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 23084541
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 440 accttttcttccataacctgcttcaggatagaaagggctatggtctctgcctc 492 ||||||||||||||||||||||||| |||||| |||||||||||||| ||||| Sbjct: 23394585 accttttcttccataacctgcttcaagatagacagggctatggtctcagcctc 23394637 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 349 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 405 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 23394395 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 23394451
>ref|NM_112287.2| Arabidopsis thaliana PAE2; endopeptidase/ peptidase/ threonine endopeptidase AT3G14290 (PAE2) mRNA, complete cds Length = 1023 Score = 79.8 bits (40), Expect = 8e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 361 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 419 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 806 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 748 Query: 420 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 471 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 747 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 696
>gb|AY062970.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 745 Score = 79.8 bits (40), Expect = 8e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 361 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 419 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 702 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 644 Query: 420 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 471 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 643 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 592
>gb|AF370245.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 987 Score = 79.8 bits (40), Expect = 8e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 361 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 419 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 805 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 747 Query: 420 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 471 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 746 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 695
>emb|BX823159.1|CNS0A658 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 79.8 bits (40), Expect = 8e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 361 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 419 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 780 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 722 Query: 420 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 471 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 721 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 670
>emb|BX822992.1|CNS0A648 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 79.8 bits (40), Expect = 8e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 361 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 419 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 740 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 682 Query: 420 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 471 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 681 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 630
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 79.8 bits (40), Expect = 8e-12 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 |||||||||||||||||||||| |||||| ||||| || || ||||||||||||||||| Sbjct: 61096 attcactcattttgctccgtatctagttta-tagtgtaatctttaaaaggtcttatattt 61154 Query: 70 aggaaccgatggagta 85 |||||| || |||||| Sbjct: 61155 aggaacggagggagta 61170 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 53 taaaaggtcttatatttaggaaccgatggagta 85 |||||||| |||||||||||||| || |||||| Sbjct: 60970 taaaaggtgttatatttaggaacggagggagta 60938 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 41 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 85 |||||||| |||| ||| | ||||||||||||||| || |||||| Sbjct: 47324 tagtgaaatctcttaaaagacttatatttaggaacggagggagta 47280
>gb|AF043525.1|AF043525 Arabidopsis thaliana 20S proteasome subunit PAE2 (PAE2) mRNA, complete cds Length = 983 Score = 79.8 bits (40), Expect = 8e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 361 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 419 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 744 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 686 Query: 420 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 471 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 685 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 634
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||||||||||||||||||||||||| | |||||||| | || ||| | ||||||||| Sbjct: 12744 attcactcattttgctccgtatgtagtctcttagtgaaatcgcttaaaagacttatattt 12685 Query: 70 aggaaccgatggagta 85 |||||| || |||||| Sbjct: 12684 aggaacggagggagta 12669 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||| |||||||||| |||||||| | |||||||| ||||| || ||||| Sbjct: 12772 tccgtatgtagtcctctagtgaaatctctaaaaagacttatattatggaacggagggagt 12831 Query: 85 a 85 | Sbjct: 12832 a 12832
>emb|BX822092.1|CNS0A644 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 844 Score = 71.9 bits (36), Expect = 2e-09 Identities = 95/112 (84%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 361 gatgaccgcttcaacctctgcaggagtgtagaggtggt-agctgggggagacattcgcaa 419 |||||| ||||||||||| ||||||||||||||| | |||| || | ||| | |||| Sbjct: 726 gatgacggcttcaacctcctgaggagtgtagaggtgataagct-ggtgcgactctggcaa 668 Query: 420 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 471 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 667 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 616
>emb|BX824071.1|CNS0A5L7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 71.9 bits (36), Expect = 2e-09 Identities = 95/112 (84%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 361 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 419 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 1329 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 1271 Query: 420 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 471 |||| ||||||||||| ||||||||||||||||| || ||||| ||| |||| Sbjct: 1270 tgtcgacattgtttggagtcaccttttcttccattacttgctttagggtaga 1219
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence Length = 1557 Score = 71.9 bits (36), Expect = 2e-09 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||||||||||||||| ||||||||| | || ||||| ||||||||| |||||||||| Sbjct: 511 attcactcattttgctctgtatgtagtata-taatgaaatctctaaaagatcttatattt 569 Query: 70 aggaaccgatggagta 85 |||| | ||||||||| Sbjct: 570 aggaccggatggagta 585
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 9 aattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatt 68 ||||||||||||||||| |||||||||| |||| ||||| ||||||| | |||||||| Sbjct: 71767 aattcactcattttgcttcgtatgtagtcctctattgaaatgtctaaaaagacttatatt 71708 Query: 69 taggaac 75 ||||||| Sbjct: 71707 taggaac 71701 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||| ||||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 90834 tccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagt 90893 Query: 85 ac 86 || Sbjct: 90894 ac 90895 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 ||||||||||||| |||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 71794 tccgtatgtagttcaatagtgaaatctctagaaagacttatatttaggaacggagggagt 71853 Query: 85 a 85 | Sbjct: 71854 a 71854 Score = 44.1 bits (22), Expect = 0.46 Identities = 67/82 (81%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| ||||| ||||||||||||| |||||| |||||||| | || ||| | ||| Sbjct: 73947 gtatagattcaatcattttgctccgaatgtagacccttagtgaaatcgcttaaaagactt 73888 Query: 64 atatttaggaaccgatggagta 85 |||||||||||| || |||||| Sbjct: 73887 atatttaggaacggagggagta 73866
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| ||||| |||||||| ||||||| |||| |||||||| || || ||||||||||| Sbjct: 265 gtatagattcattcattttgttccgtatatagtcttctagtggaatctttaaaaggtctt 206 Query: 64 atattt 69 |||||| Sbjct: 205 atattt 200 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 |||||||||||||| ||||||||||| || |||||||| ||| || | ||||||||| Sbjct: 8453 attcactcattttggtccgtatgtagattcttagtgaaatatctttaaagacttatattt 8512 Query: 70 aggaaccgatggagta 85 |||||| ||||||||| Sbjct: 8513 aggaacggatggagta 8528 Score = 58.0 bits (29), Expect = 3e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||||| ||||| || |||||||| ||||||||||||||||| || ||||| Sbjct: 287 tccgtatgtagttta-tagtgcaatctctaaaaagtcttatatttaggaacggagggagt 345 Query: 85 a 85 | Sbjct: 346 a 346
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 5 tataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctta 64 |||| |||||||||||||||| |||||||| ||| ||||| || ||| |||| |||||| Sbjct: 178059 tatagattcactcattttgctttgtatgtag-tttatagtgcaatctccaaaatgtctta 178001 Query: 65 tatttaggaaccgatggagtac 86 ||||||||||| |||| ||||| Sbjct: 178000 tatttaggaacggatgaagtac 177979 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 51 tctaaaaggtcttatatttaggaaccgatggagta 85 ||||||| ||||||||||||||||| || |||||| Sbjct: 178106 tctaaaatgtcttatatttaggaacggagggagta 178140
>emb|BX822457.1|CNS0A63I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 868 Score = 65.9 bits (33), Expect = 1e-07 Identities = 89/105 (84%), Gaps = 2/105 (1%) Strand = Plus / Minus Query: 368 gcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaatgtcaac 426 ||||||||||| ||||||||||||||| || ||||| | ||| || |||||||| || Sbjct: 733 gcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaatgtcgac 675 Query: 427 attgtttggggtcaccttttcttccataacctgcttcaggataga 471 ||||||||| || |||||||||||||| || ||||| |||||||| Sbjct: 674 attgtttggagtaaccttttcttccattacttgctttaggataga 630
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 63.9 bits (32), Expect = 5e-07 Identities = 66/76 (86%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 |||||||||||||||| |||| |||| | ||||| || |||||||||||||||||||| Sbjct: 777 attcactcattttgcttcgtacctagtcta-tagtgtaatctctaaaaggtcttatattt 719 Query: 70 aggaaccgatggagta 85 |||||| || |||||| Sbjct: 718 aggaacggagggagta 703 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 41 tagtgaaaactctaaaaggtcttatatttaggaac 75 ||||| || |||||||| ||||||||||||||||| Sbjct: 819 tagtggaatctctaaaatgtcttatatttaggaac 853
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 14 actcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttagga 73 |||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||| | Sbjct: 460 actcattttgctccgtatgtagacttctagtgaaatatcttaaaagacttatatttagaa 401 Query: 74 accgatggagta 85 || || |||||| Sbjct: 400 acggagggagta 389 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 ||||||||||||| ||| |||| |||| || ||||||||||||||||| || ||||| Sbjct: 492 tccgtatgtagttcactaaagaaacctctttaaagtcttatatttaggaacggagggagt 551 Query: 85 acaaa 89 ||||| Sbjct: 552 acaaa 556
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 61.9 bits (31), Expect = 2e-06 Identities = 72/83 (86%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 4 gtataaattcactcattttgctccgtat-gtagttttctagtgaaaactctaaaaggtct 62 ||||| |||||||||||||||||||||| |||| | | |||||||| |||| ||||||| Sbjct: 1113 gtatagattcactcattttgctccgtatcgtag-tctatagtgaaatgtctacaaggtct 1171 Query: 63 tatatttaggaaccgatggagta 85 |||||||| |||| || |||||| Sbjct: 1172 tatatttaagaacggagggagta 1194 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 53 taaaaggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||||||| ||||||||| Sbjct: 1249 taaaaggtcttatatttaggaacggatggagta 1217 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 41 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagtacaaa 89 |||| ||| ||||| |||||||||||||||||||| || |||||||||| Sbjct: 1076 tagtaaaatctctagaaggtcttatatttaggaacggagggagtacaaa 1028 Score = 50.1 bits (25), Expect = 0.007 Identities = 60/71 (84%), Gaps = 3/71 (4%) Strand = Plus / Plus Query: 5 tataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctta 64 |||| |||||||||||||| ||||||||||| |||| || ||||| ||||||||| Sbjct: 1301 tatacattcactcattttgttccgtatgtag---tctataataatctctagaaggtctta 1357 Query: 65 tatttaggaac 75 ||||||||||| Sbjct: 1358 tatttaggaac 1368
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 60.0 bits (30), Expect = 8e-06 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 12 tcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttag 71 ||||||||||| |||||||||||| | ||||| || |||||||| | ||||||||||| Sbjct: 4805 tcactcatttttctccgtatgtagcct-ctagtagaatctctaaaaagacttatatttag 4747 Query: 72 gaaccgatggagta 85 |||| ||||||||| Sbjct: 4746 gaacggatggagta 4733 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||||||||||||||| ||||||| | |||||||| | || ||| | ||||||||| Sbjct: 93804 attcactcattttgctctgtatgtaatcccttagtgaaatcgcttaaaagacttatattt 93745 Query: 70 aggaaccgatggagtac 86 |||||| || ||||||| Sbjct: 93744 aggaacggagggagtac 93728 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Plus Query: 40 ctagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 85 ||||||||| ||||| || | ||||||||||||||| || |||||| Sbjct: 67903 ctagtgaaatctctacaaagacttatatttaggaacggagggagta 67948 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||| |||||||||| ||||||||| | |||||||| | || ||| | ||||||||| Sbjct: 67860 attcaatcattttgcttcgtatgtagacatatagtgaaatcgcttaaaagacttatattt 67801 Query: 70 aggaac 75 |||||| Sbjct: 67800 aggaac 67795
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 60.0 bits (30), Expect = 8e-06 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 14 actcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttagga 73 |||||||||||| |||||||||| | |||||||| || ||||||| ||| ||||||||| Sbjct: 7472 actcattttgcttcgtatgtagtcta-tagtgaaatctttaaaaggacttgtatttagga 7414 Query: 74 accgatggagtaca 87 || || |||||||| Sbjct: 7413 acggagggagtaca 7400
>ref|NM_104262.1| Arabidopsis thaliana PAE1; endopeptidase/ peptidase/ threonine endopeptidase AT1G53850 (PAE1) mRNA, complete cds Length = 1006 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 431 tttggggtcaccttttcttccataacctgcttcaggataga 471 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 747 tttggagtcaccttttcttccataacttgctttaggataga 707
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 ||||||||||| ||| || ||||| |||||||| | ||||||||||||||| || ||||| Sbjct: 57404 tccgtatgtagatttttaatgaaacctctaaaaagacttatatttaggaacggagggagt 57345 Query: 85 a 85 | Sbjct: 57344 a 57344 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||| ||||||||| ||||||| | ||||||||||||||| || ||||| Sbjct: 52414 tccgtatgtagtcccctagtgaaacatctaaaaagacttatatttaggaacggagggagt 52473 Query: 85 a 85 | Sbjct: 52474 a 52474
>gb|AY114616.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 869 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 431 tttggggtcaccttttcttccataacctgcttcaggataga 471 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 632 tttggagtcaccttttcttccataacttgctttaggataga 592
>gb|DQ220740.1| Aegilops sharonensis genomic sequence Length = 3804 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttcta 42 |||||||||||||||||||||| |||||||||| Sbjct: 2715 attcactcattttgctccgtatatagttttcta 2747
>gb|AY072371.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 1003 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 431 tttggggtcaccttttcttccataacctgcttcaggataga 471 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 745 tttggagtcaccttttcttccataacttgctttaggataga 705
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 7 taaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttata 66 |||||| |||||||||||| |||||||||| | ||||||||| || ||| | | |||||| Sbjct: 11727 taaatttactcattttgcttcgtatgtagtctcctagtgaaatctttaagaagacttata 11668 Query: 67 tttaggaac 75 ||| ||||| Sbjct: 11667 ttttggaac 11659
>dbj|AK220949.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-54-C04 Length = 543 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 431 tttggggtcaccttttcttccataacctgcttcaggataga 471 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 274 tttggagtcaccttttcttccataacttgctttaggataga 234
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||||| ||||| || |||||||| | ||||||||||||||| || ||||| Sbjct: 8781 tccgtatgtagtttaatagtggaatctctaaaaagacttatatttaggaactgagggagt 8722 Query: 85 a 85 | Sbjct: 8721 a 8721
>gb|AY086045.1| Arabidopsis thaliana clone 20801 mRNA, complete sequence Length = 1006 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 431 tttggggtcaccttttcttccataacctgcttcaggataga 471 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 747 tttggagtcaccttttcttccataacttgctttaggataga 707
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 5 tataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctta 64 |||| |||||||||||||||| ||||||||| | |||||||| ||| ||| | |||| Sbjct: 91764 tatatattcactcattttgctttgtatgtagtctcttagtgaaatttcttaaaagactta 91823 Query: 65 tatttaggaaccgatggagta 85 ||||||||||| || |||||| Sbjct: 91824 tatttaggaacggagggagta 91844 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaac 75 |||||||||||| | |||||||| |||||||| | ||||||||||||||| Sbjct: 91741 tccgtatgtagtcctatagtgaaacctctaaaaagacttatatttaggaac 91691
>gb|AF255338.1|AF255338 Glycine max 20S proteasome subunit mRNA, complete cds Length = 966 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 416 gcaatgtcaacattgtttggggtcaccttttcttccataacctgcttca 464 ||||||||||| ||||| || || ||||||||||||||||| ||||||| Sbjct: 660 gcaatgtcaacgttgttgggagtgaccttttcttccataacttgcttca 612
>gb|AF043524.1|AF043524 Arabidopsis thaliana 20S proteasome subunit PAE1 (PAE1) mRNA, complete cds Length = 1005 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 431 tttggggtcaccttttcttccataacctgcttcaggataga 471 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 725 tttggagtcaccttttcttccataacttgctttaggataga 685
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 |||||||||||||||| |||| |||| |||||||||| ||| ||| | ||||||||| Sbjct: 1748 attcactcattttgctttgtatttagtcatctagtgaaatatcttaaaagacttatattt 1807 Query: 70 aggaaccgatggagta 85 |||||| || |||||| Sbjct: 1808 aggaacggagggagta 1823
>gb|DQ013359.1| Triticum aestivum wall-associated kinase 3 (WAK3) gene, complete cds Length = 5331 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagtt 37 |||||||||||||||||||||||||||| Sbjct: 323 attcactcattttgctccgtatgtagtt 350
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 14 actcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttagga 73 |||||||||||||||||||||| ||||| ||||| ||| ||| | ||||||||||| | Sbjct: 159 actcattttgctccgtatgtagacttctactgaaatatcttaaaagacttatatttagaa 100 Query: 74 accgatggagta 85 || || |||||| Sbjct: 99 acggagggagta 88 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 ||||||||||||| ||| |||| |||| || ||||||||||||||||| || ||||| Sbjct: 191 tccgtatgtagttcactaaagaaacctctttaaagtcttatatttaggaacggagggagt 250 Query: 85 acaaa 89 ||||| Sbjct: 251 acaaa 255
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 1303 attcactcattttgctccgtatgtagt 1329 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 50 ctctaaaaggtcttatatttaggaaccgatggagta 85 |||||||| | ||||||||||||||| || |||||| Sbjct: 1251 ctctaaaaagacttatatttaggaacggagggagta 1216
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 1309 attcactcattttgctccgtatgtagt 1335 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 50 ctctaaaaggtcttatatttaggaaccgatggagta 85 |||||||| | ||||||||||||||| || |||||| Sbjct: 1257 ctctaaaaagacttatatttaggaacggagggagta 1222
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 70042 attcactcattttgctccgtatgtagt 70068
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 50001 attcactcattttgctccgtatgtagt 50027 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 51 tctaaaaggtcttatatttaggaaccgatggagtaca 87 ||||||| | ||||||||||||||| || |||||||| Sbjct: 49946 tctaaaaagacttatatttaggaacagagggagtaca 49910
>gb|DQ247831.1| Aegilops sharonensis voucher H6680 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 993 attcactcattttgctccgtatgtagt 967
>gb|DQ247830.1| Aegilops longissima voucher H6679 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 993 attcactcattttgctccgtatgtagt 967
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 24785 attcactcattttgctccgtatgtagt 24759
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 7792 attcactcattttgctccgtatgtagt 7818
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 56852 attcactcattttgctccgtatgtagt 56826 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 gtataaattcactcattttgctccgtat 31 |||||||||||||||| |||||| |||| Sbjct: 59968 gtataaattcactcatgttgctctgtat 59995
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||| | |||||| || ||||| || | ||||||||||||||| || ||||| Sbjct: 356 tccgtatgtagtctactagtggaatctctagaaagacttatatttaggaacggagggagt 415 Query: 85 aca 87 ||| Sbjct: 416 aca 418 Score = 40.1 bits (20), Expect = 7.1 Identities = 62/76 (81%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||| |||||||||| ||||||||| | | |||||| |||| ||| | ||||||||| Sbjct: 326 attcattcattttgcttcgtatgtagactcttggtgaaatctcttaaaagacttatattt 267 Query: 70 aggaaccgatggagta 85 || ||| || |||||| Sbjct: 266 agaaacggagggagta 251
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagt 36 ||||||||||||||||||||||||||| Sbjct: 2329 attcactcattttgctccgtatgtagt 2355
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 84 |||||||||||| ||||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 380 tccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagt 439 Query: 85 ac 86 || Sbjct: 440 ac 441
>emb|X68288.1|TAECPRO T.aestivum gene for EC protein Length = 3065 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 4 gtataaattcactcattttgctccgtatgtagtt 37 ||||| ||||| |||||||||||||||||||||| Sbjct: 1780 gtatagattcattcattttgctccgtatgtagtt 1813
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 |||||||||||||||| ||||||||| | ||||||||| ||| ||| | ||||||| | Sbjct: 50556 attcactcattttgcttcgtatgtagactcctagtgaaatatcttaaaagacttatatct 50615 Query: 70 aggaac 75 |||||| Sbjct: 50616 aggaac 50621
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 52.0 bits (26), Expect = 0.002 Identities = 66/78 (84%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 |||||||||||||||| |||||||||| |||||||| ||||| | | ||||||||| Sbjct: 8649 attcactcattttgcttcgtatgtagtcca-tagtgaaatctctacagagacttatattt 8707 Query: 70 aggaaccgatggagtaca 87 |||||| || |||||||| Sbjct: 8708 aggaacggagggagtaca 8725
>gb|AF474923.1| Hordeum vulgare subsp. vulgare chalcone isomerase (CHI) gene, complete cds Length = 11475 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 41 tagtgaaaactctaaaaggtcttatatttaggaa 74 |||||||| |||||||||||||| |||||||||| Sbjct: 10896 tagtgaaatctctaaaaggtcttgtatttaggaa 10863
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 50.1 bits (25), Expect = 0.007 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||| |||||||| |||||||||||| | || ||||| || ||||||| || |||||| Sbjct: 456 attcattcattttgttccgtatgtagtata-tattgaaatctttaaaaggcctgatattt 514 Query: 70 aggaaccgatggagtac 86 |||||| || ||||||| Sbjct: 515 aggaacggagggagtac 531 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctctaaaaggtcttatattt 69 |||||||||||||||||||| Sbjct: 404 ctctaaaaggtcttatattt 385
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||||||||||||||| ||||||| | |||||||| | || ||| | ||||||||| Sbjct: 2105 attcactcattttgctctgtatgtaatcccttagtgaaatcgcttaaaagacttatattt 2164 Query: 70 aggaaccgatggagtac 86 |||||| || ||||||| Sbjct: 2165 aggaacggagggagtac 2181
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 48.1 bits (24), Expect = 0.029 Identities = 63/76 (82%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||||||||||||||| |||||||| | |||||||| || ||| | ||||||||| Sbjct: 23349 attcactcattttgctctgtatgtagatcattagtgaaattccttaaaagacttatattt 23290 Query: 70 aggaaccgatggagta 85 |||||| || |||||| Sbjct: 23289 aggaacggagggagta 23274
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 13 cactcattttgctccgtatgtagt 36 |||||||||||||||||||||||| Sbjct: 1285 cactcattttgctccgtatgtagt 1262
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagtt 37 |||||||||||||| ||||||||||||| Sbjct: 172993 attcactcattttgttccgtatgtagtt 172966
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 48.1 bits (24), Expect = 0.029 Identities = 63/76 (82%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 69 ||||| |||||||||||| ||||||| | |||||||| | || ||| | ||||||||| Sbjct: 5231 attcaatcattttgctccctatgtagatccttagtgaaatcgcttaaaagacttatattt 5172 Query: 70 aggaaccgatggagta 85 |||||| || |||||| Sbjct: 5171 aggaacggagggagta 5156 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 4 gtataaattcactcattttgctccgtatg 32 ||||| ||||| ||||||||||||||||| Sbjct: 5315 gtatagattcattcattttgctccgtatg 5343
>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete sequence Length = 85413 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 440 accttttcttccataacctgcttcaggataga 471 ||||||||||||||||| ||||| |||||||| Sbjct: 39529 accttttcttccataacttgctttaggataga 39560
>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21 Length = 83906 Score = 48.1 bits (24), Expect = 0.029 Identities = 71/84 (84%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 361 gatgaccgcttcaacctctgcaggagtgtagaggtggt-agctgggggagacattcgcaa 419 |||||| ||||||||||| ||||||||||||||| | |||| || | ||| || |||| Sbjct: 30467 gatgacggcttcaacctcctgaggagtgtagaggtgataagct-ggtgcgactttggcaa 30409 Query: 420 tgtcaacattgtttggggtcacct 443 |||| ||||||||||| ||||||| Sbjct: 30408 tgtcgacattgtttggagtcacct 30385 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 440 accttttcttccataacctgcttcaggataga 471 |||||||||||||| || ||||| |||||||| Sbjct: 30295 accttttcttccattacttgctttaggataga 30264
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgtag 35 ||||| |||||||||||||| ||||||||||| Sbjct: 3923 gtatagattcactcattttgttccgtatgtag 3892 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 41 tagtgaaaactctaaaaggtcttatatttaggaac 75 ||||| || ||||| |||||||||||||||||||| Sbjct: 3960 tagtggaatctctagaaggtcttatatttaggaac 3994
>gb|U25649.1|ATU25649 Arabidopsis thaliana putative pectin methylesterase (ATPME2) gene, partial cds, and (ATPME1) gene, complete cds Length = 5873 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 440 accttttcttccataacctgcttcaggataga 471 ||||||||||||||||| ||||| |||||||| Sbjct: 5714 accttttcttccataacttgctttaggataga 5745
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 44 tgaaaactctaaaaggtcttatatttag 71 ||||| |||||||||||||||||||||| Sbjct: 2222 tgaaatctctaaaaggtcttatatttag 2195 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 ctctaaaaggtcttatatttaggaa 74 |||||||||||||||||| |||||| Sbjct: 2307 ctctaaaaggtcttatatctaggaa 2331
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 57 aggtcttatatttaggaaccgatggagtacaa 88 ||||||||||||||||||| || ||||||||| Sbjct: 40538 aggtcttatatttaggaacggagggagtacaa 40507 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 40791 aggtcttatatttaggaacggagggagta 40819
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 59 gtcttatatttaggaaccgatggagtac 86 ||||||||||||||||| |||||||||| Sbjct: 12452 gtcttatatttaggaacggatggagtac 12425 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 12738 aggtcttatatttaggaacggagggagta 12766
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 16 tcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttag 71 |||||||||| |||||||||| | ||| ||||| |||||||| ||||||||||| Sbjct: 1268 tcattttgcttcgtatgtagtctcctaatgaaatctctaaaaaaccttatatttag 1213
>gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0009C07, complete sequence Length = 124266 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 48 aactctaaaaggtcttatatttaggaaccgatggagtac 86 |||||||||| | ||||||||||| ||||||||||||| Sbjct: 115008 aactctaaaactttttatatttagggaccgatggagtac 114970
>gb|AC124464.3| Mus musculus BAC clone RP24-155I15 from chromosome 19, complete sequence Length = 188587 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 461 ttcaggatagaaagggctatggt 483 ||||||||||||||||||||||| Sbjct: 35064 ttcaggatagaaagggctatggt 35086
>gb|AC126266.3| Mus musculus BAC clone RP23-402N17 from chromosome 19, complete sequence Length = 205037 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 461 ttcaggatagaaagggctatggt 483 ||||||||||||||||||||||| Sbjct: 180084 ttcaggatagaaagggctatggt 180106
>gb|L23648.1| Caenorhabditis elegans cosmid F44B9, complete sequence Length = 36327 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 191 ctggctggaatgctgaaaaataattct 217 |||| |||||||||||||||||||||| Sbjct: 15724 ctgggtggaatgctgaaaaataattct 15750
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 51 tctaaaaggtcttatatttaggaaccgatggagta 85 ||||||| | ||||||||||||||| ||||||||| Sbjct: 1940 tctaaaaagacttatatttaggaacggatggagta 1906
>gb|AC105746.10| Oryza sativa chromosome 10 BAC OSJNBb0086I08 genomic sequence, complete sequence Length = 126842 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 48 aactctaaaaggtcttatatttaggaaccgatggagtac 86 |||||||||| | ||||||||||| ||||||||||||| Sbjct: 731 aactctaaaactttttatatttagggaccgatggagtac 693
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttag 71 |||||||||||||| || ||||| |||||||| | ||||||||||| Sbjct: 197594 tccgtatgtagtttaataatgaaacctctaaaaagacttatatttag 197640
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 48 aactctaaaaggtcttatatttaggaaccgatggagtac 86 |||||||||| | ||||||||||| ||||||||||||| Sbjct: 5666391 aactctaaaactttttatatttagggaccgatggagtac 5666429
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 10 attcactcattttgctccgtatgtagt 36 |||||||||||||||||||||| |||| Sbjct: 458 attcactcattttgctccgtatatagt 432
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 48 aactctaaaaggtcttatatttaggaaccgatggagtac 86 |||||||||| | ||||||||||| ||||||||||||| Sbjct: 5667578 aactctaaaactttttatatttagggaccgatggagtac 5667616
>gb|M60732.1|BLYCLDAA Hordeum vulgare cold-regulated mRNA, 3' end Length = 653 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 51 tctaaaaggtcttatatttaggaaccgatggagtacaaa 89 |||||||| |||||||||||| ||| || |||||||||| Sbjct: 637 tctaaaagatcttatatttagaaacggagggagtacaaa 599
>dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34M22, TM0282, complete sequence Length = 107979 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 taaaaggtcttatatttaggaac 75 ||||||||||||||||||||||| Sbjct: 62753 taaaaggtcttatatttaggaac 62775
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 53 taaaaggtcttatatttaggaaccgatggagtac 86 |||||||||||||||| |||||| || ||||||| Sbjct: 30831 taaaaggtcttatattcaggaacggagggagtac 30864 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 aaaggtcttatatttaggaa 74 |||||||||||||||||||| Sbjct: 30732 aaaggtcttatatttaggaa 30713
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 44.1 bits (22), Expect = 0.46 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 20 tttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgat 79 |||||||||||||||| ||| || || || |||||||| | |||||||||||| | ||| Sbjct: 8624 tttgctccgtatgtag-tttatattggaatctctaaaaagacttatatttagggatggat 8566 Query: 80 ggagta 85 |||||| Sbjct: 8565 ggagta 8560
>gb|AC110197.9| Mus musculus chromosome 1, clone RP24-405O20, complete sequence Length = 144856 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 aactctaaaaggtcttatattt 69 |||||||||||||||||||||| Sbjct: 81121 aactctaaaaggtcttatattt 81100
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 44.1 bits (22), Expect = 0.46 Identities = 67/82 (81%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtctt 63 ||||| ||||| ||||||||||||| |||||| |||||||| | || ||| | ||| Sbjct: 898 gtatagattcaatcattttgctccgaatgtagacccttagtgaaatcgcttaaaagactt 839 Query: 64 atatttaggaaccgatggagta 85 |||||||||||| || |||||| Sbjct: 838 atatttaggaacggagggagta 817
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 atatttaggaaccgatggagta 85 |||||||||||||||||||||| Sbjct: 17105538 atatttaggaaccgatggagta 17105559 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gtcttatatttaggaaccgatggagtac 86 ||||||||||| ||||| |||||||||| Sbjct: 26776178 gtcttatattttggaacggatggagtac 26776151
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 atatttaggaaccgatggagta 85 |||||||||||||||||||||| Sbjct: 136284 atatttaggaaccgatggagta 136305
>gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete sequence Length = 113373 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 tacgaaccaaacacacacaaat 169 |||||||||||||||||||||| Sbjct: 56652 tacgaaccaaacacacacaaat 56673
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 4 gtataaattcactcattttgctccgtatgt 33 ||||| |||||||||||||||||| ||||| Sbjct: 23192 gtatagattcactcattttgctccttatgt 23163
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 ttcactcattttgctccgtatgtagt 36 ||||||||||||||||||||| |||| Sbjct: 3635 ttcactcattttgctccgtatatagt 3610
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 atatttaggaaccgatggagta 85 |||||||||||||||||||||| Sbjct: 17099107 atatttaggaaccgatggagta 17099128 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gtcttatatttaggaaccgatggagtac 86 ||||||||||| ||||| |||||||||| Sbjct: 26867501 gtcttatattttggaacggatggagtac 26867474
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 48 aactctaaaaggtcttatatttaggaaccgatggagta 85 |||||||||| ||||||||||| || || ||||||||| Sbjct: 23741644 aactctaaaacgtcttatattttgggacggatggagta 23741681
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 44.1 bits (22), Expect = 0.46 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 25 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaa 74 |||||||||||||| ||| ||||| || ||||| | |||||||||||||| Sbjct: 1504 tccgtatgtagttt-ctaatgaaacctttaaaaagacttatatttaggaa 1456
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 7 taaattcactcattttgctccgtatgtagt 36 ||||||||||||||||| ||| |||||||| Sbjct: 54211 taaattcactcattttgttccatatgtagt 54240
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 48 aactctaaaaggtcttatatttaggaaccgatggagta 85 |||||||||| ||||||||||| || || ||||||||| Sbjct: 52228 aactctaaaacgtcttatattttgggacggatggagta 52265
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Minus Query: 41 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagtacaaac 90 |||||||| ||||| || | |||||||||||||| || ||||||||||| Sbjct: 2829 tagtgaaatctctacaaagacttatatttaggaatggagggagtacaaac 2780
>emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 on chromosome 3, complete sequence Length = 145085 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 cttatatttaggaaccgatggagta 85 ||||||||||||||| ||||||||| Sbjct: 112245 cttatatttaggaacggatggagta 112269
>gb|AC133189.3| Mus musculus BAC clone RP23-354M9 from chromosome 15, complete sequence Length = 198577 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ctctaaaaggtcttatattta 70 ||||||||||||||||||||| Sbjct: 60208 ctctaaaaggtcttatattta 60188
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 ttcactcattttgctccgtatgtag 35 |||| |||||||||||||||||||| Sbjct: 2266 ttcattcattttgctccgtatgtag 2242
>gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K5, complete sequence Length = 165962 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 ataacctgcttcaggatagaa 472 ||||||||||||||||||||| Sbjct: 111611 ataacctgcttcaggatagaa 111591
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 cttatatttaggaaccgatggagta 85 |||||||||||| |||||||||||| Sbjct: 24765216 cttatatttagggaccgatggagta 24765192 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 359 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 399 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 18912624 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 18912664
>gb|BC090701.1| Danio rerio cDNA clone IMAGE:7140566 Length = 2815 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 tttagtagtagagatgtttta 149 ||||||||||||||||||||| Sbjct: 2532 tttagtagtagagatgtttta 2512
>emb|CR854847.7| Zebrafish DNA sequence from clone DKEY-266L9 in linkage group 11, complete sequence Length = 48855 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 tttagtagtagagatgtttta 149 ||||||||||||||||||||| Sbjct: 33052 tttagtagtagagatgtttta 33072
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 cttatatttaggaaccgatggagtacaaa 89 ||||||||||||||| || |||||||||| Sbjct: 3636 cttatatttaggaacggagggagtacaaa 3664 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ttcactcattttgctccgtat 31 ||||||||||||||||||||| Sbjct: 3575 ttcactcattttgctccgtat 3555
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 cttatatttaggaaccgatggagta 85 |||||||||||| |||||||||||| Sbjct: 24693422 cttatatttagggaccgatggagta 24693398 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 359 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 399 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 18838851 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 18838891
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 cttatatttaggaaccgatggagta 85 |||||||||||| |||||||||||| Sbjct: 72373 cttatatttagggaccgatggagta 72349
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 359 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 399 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 57755 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 57715
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 359 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 399 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 8741 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 8781
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 78631 aggtcttatatttaggaacggagggagta 78659
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 4757 aggtcttatatttaggaacggagggagta 4785 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 4505 aggtcttatatttaggaacggagggagta 4477
>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340, complete sequence Length = 120480 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 18035 aaaggtcttatatttaggaac 18015
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 26721 aaaggtcttatatttaggaac 26741
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 26891 aaaggtcttatatttaggaac 26871
>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234, complete sequence Length = 105887 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 26351 aggtcttatatttaggaacggagggagta 26323
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 25852 aggtcttatatttaggaacggagggagta 25824
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 68731 aggtcttatatttaggaacggagggagta 68703 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 57061 aggtcttatatttaggaacggagggagta 57033
>dbj|AP006135.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT30O01, TM0233, complete sequence Length = 126062 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 113034 aaaggtcttatatttaggaac 113014
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 127292 aaaggtcttatatttaggaac 127312
>dbj|AP006124.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT15N01, TM0209, complete sequence Length = 104684 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 97355 aaaggtcttatatttaggaac 97375
>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b, complete sequence Length = 66866 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 3271 aggtcttatatttaggaacggagggagta 3299
>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b, complete sequence Length = 92724 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 18016 aaaggtcttatatttaggaac 17996
>dbj|AP004942.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43P05, TM0113, complete sequence Length = 101270 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 96897 aaaggtcttatatttaggaac 96877
>dbj|AP004937.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08M07, TM0096a, complete sequence Length = 24390 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 17197 aaaggtcttatatttaggaac 17217
>dbj|AP004927.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01G01, TM0081a, complete sequence Length = 60689 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 16572 aaaggtcttatatttaggaac 16592
>dbj|AP004629.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07I01b, TM0091b, complete sequence Length = 59720 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 21750 aaaggtcttatatttaggaac 21730
>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b, complete sequence Length = 38490 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 37287 aggtcttatatttaggaacggagggagta 37259
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 69552 aggtcttatatttaggaacggagggagta 69524
>dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05P01, TM0048, complete sequence Length = 110811 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 51321 aaaggtcttatatttaggaac 51301
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 aggtcttatatttaggaaccgatggagta 85 ||||||||||||||||||| || |||||| Sbjct: 44823 aggtcttatatttaggaacggagggagta 44851
>dbj|AP004482.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17C05, TM0014, complete sequence Length = 129532 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 aaaggtcttatatttaggaac 75 ||||||||||||||||||||| Sbjct: 115964 aaaggtcttatatttaggaac 115984
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 tgaaaactctaaaaggtcttatatttaggaac 75 ||||| |||||||| | ||||||||||||||| Sbjct: 260199 tgaaatctctaaaaagacttatatttaggaac 260168
>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003G23, complete sequence Length = 135931 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 gtcttatatttaggaaccgatggagtac 86 ||||||||||| ||||| |||||||||| Sbjct: 58034 gtcttatattttggaacggatggagtac 58061
>gb|AC140680.4| Mus musculus BAC clone RP24-548A12 from chromosome Y, complete sequence Length = 222176 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 62982 aaactctaaaaagtcttatattta 63005 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 1379 aaactctaaaaagtcttatattta 1402
>gb|AC145586.4| Mus musculus BAC clone RP24-167J1 from chromosome Y, complete sequence Length = 158469 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 135065 aaactctaaaaagtcttatattta 135088
>gb|AC140388.3| Mus musculus BAC clone RP24-194N20 from chromosome Y, complete sequence Length = 168850 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 124453 aaactctaaaaagtcttatattta 124430
>gb|AC145267.5| Mus musculus BAC clone RP24-161F7 from chromosome Y, complete sequence Length = 159830 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 134751 aaactctaaaaagtcttatattta 134774
>gb|AC131783.4| Mus musculus BAC clone RP24-377P12 from chromosome Y, complete sequence Length = 223801 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 26072 aaactctaaaaagtcttatattta 26049
>gb|AC129594.3| Mus musculus BAC clone RP24-319J19 from chromosome Y, complete sequence Length = 147674 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 145809 aaactctaaaaagtcttatattta 145832
>gb|AC140371.3| Mus musculus BAC clone RP24-220G21 from chromosome Y, complete sequence Length = 190597 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 52223 aaactctaaaaagtcttatattta 52200 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 46214 aaactctaaaaagtcttatattta 46191
>gb|AC145346.3| Mus musculus BAC clone RP24-76G8 from chromosome Y, complete sequence Length = 207267 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 20528 aaactctaaaaagtcttatattta 20505
>gb|AC140401.4| Mus musculus BAC clone RP24-89O8 from chromosome Y, complete sequence Length = 244637 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 218275 aaactctaaaaagtcttatattta 218298
>gb|AC145742.3| Mus musculus BAC clone RP24-225F21 from chromosome Y, complete sequence Length = 183572 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 1786 aaactctaaaaagtcttatattta 1763
>gb|AC145581.3| Mus musculus BAC clone RP24-151A14 from chromosome Y, complete sequence Length = 155089 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 140461 aaactctaaaaagtcttatattta 140438
>gb|AC140925.4| Mus musculus BAC clone RP24-140B17 from chromosome Y, complete sequence Length = 172606 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 96849 aaactctaaaaagtcttatattta 96826
>gb|AC145605.3| Mus musculus BAC clone RP24-246N9 from chromosome Y, complete sequence Length = 147478 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 12704 aaactctaaaaagtcttatattta 12727
>gb|AC145603.3| Mus musculus BAC clone RP24-319B23 from chromosome Y, complete sequence Length = 149766 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 867 aaactctaaaaagtcttatattta 890
>gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosome Y, complete sequence Length = 208700 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 858 aaactctaaaaagtcttatattta 881
>gb|AC142265.4| Mus musculus BAC clone RP24-360F24 from chromosome Y, complete sequence Length = 164772 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 56849 aaactctaaaaagtcttatattta 56826
>gb|AC144579.2| Mus musculus BAC clone RP24-375M15 from chromosome Y, complete sequence Length = 162972 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 16230 aaactctaaaaagtcttatattta 16207
>gb|AC129289.4| Mus musculus BAC clone RP24-482E11 from chromosome Y, complete sequence Length = 181755 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 1568 aaactctaaaaagtcttatattta 1591
>gb|AC183431.1| Mus musculus BAC clone RP24-128G23 from chromosome y, complete sequence Length = 158633 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 137903 aaactctaaaaagtcttatattta 137880
>gb|AC184101.1| Mus musculus BAC clone RP24-534I7 from chromosome y, complete sequence Length = 147390 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 131475 aaactctaaaaagtcttatattta 131498
>gb|AC175670.3| Mus musculus BAC clone RP24-304I16 from chromosome y, complete sequence Length = 168071 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 50750 aaactctaaaaagtcttatattta 50727
>gb|AC175494.3| Mus musculus BAC clone RP24-75G20 from chromosome y, complete sequence Length = 229858 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 199615 aaactctaaaaagtcttatattta 199592
>gb|AC147126.2| Mus musculus BAC clone RP24-561J22 from chromosome Y, complete sequence Length = 141049 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 54165 aaactctaaaaagtcttatattta 54142
>gb|AC145299.3| Mus musculus BAC clone RP24-129J23 from chromosome Y, complete sequence Length = 152085 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 114864 aaactctaaaaagtcttatattta 114841
>gb|AC140435.3| Mus musculus BAC clone RP24-172H21 from chromosome Y, complete sequence Length = 191085 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 17303 aaactctaaaaagtcttatattta 17326
>gb|AC141875.4| Mus musculus BAC clone RP24-316O22 from chromosome Y, complete sequence Length = 170988 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 867 aaactctaaaaagtcttatattta 890
>gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome Y, complete sequence Length = 162710 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 156907 aaactctaaaaagtcttatattta 156884
>gb|AC140258.4| Mus musculus BAC clone RP24-295F23 from chromosome Y, complete sequence Length = 176758 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 17822 aaactctaaaaagtcttatattta 17845
>gb|AC144582.3| Mus musculus BAC clone RP24-323J22 from chromosome Y, complete sequence Length = 214364 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 89124 aaactctaaaaagtcttatattta 89147
>gb|AC142451.4| Mus musculus BAC clone RP24-443M4 from chromosome Y, complete sequence Length = 138426 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 66269 aaactctaaaaagtcttatattta 66292
>gb|AC142412.3| Mus musculus BAC clone RP24-75E18 from chromosome Y, complete sequence Length = 175697 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 148325 aaactctaaaaagtcttatattta 148348
>gb|AC129191.4| Mus musculus BAC clone RP24-81F10 from chromosome Y, complete sequence Length = 241616 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 160416 aaactctaaaaagtcttatattta 160439
>gb|AC130833.3| Mus musculus BAC clone RP24-91H16 from chromosome Y, complete sequence Length = 208378 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 27062 aaactctaaaaagtcttatattta 27085 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 21053 aaactctaaaaagtcttatattta 21076
>gb|AC130834.4| Mus musculus BAC clone RP24-119M1 from chromosome Y, complete sequence Length = 189883 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 139823 aaactctaaaaagtcttatattta 139800
>gb|AC145344.2| Mus musculus BAC clone RP24-134P13 from chromosome Y, complete sequence Length = 183987 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 120370 aaactctaaaaagtcttatattta 120347
>gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosome Y, complete sequence Length = 199089 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 198006 aaactctaaaaagtcttatattta 197983
>gb|AC132341.4| Mus musculus BAC clone RP24-168C11 from chromosome Y, complete sequence Length = 142720 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 95421 aaactctaaaaagtcttatattta 95398
>gb|AC145266.3| Mus musculus BAC clone RP24-174A3 from chromosome Y, complete sequence Length = 143481 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 87339 aaactctaaaaagtcttatattta 87362
>gb|AC140427.3| Mus musculus BAC clone RP24-173G7 from chromosome Y, complete sequence Length = 182766 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 103010 aaactctaaaaagtcttatattta 103033
>gb|AC144855.3| Mus musculus BAC clone RP24-179H2 from chromosome Y, complete sequence Length = 152731 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 75320 aaactctaaaaagtcttatattta 75297
>gb|AC139196.4| Mus musculus BAC clone RP24-189L24 from chromosome Y, complete sequence Length = 143221 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 141850 aaactctaaaaagtcttatattta 141827
>gb|AC145596.3| Mus musculus BAC clone RP24-211L15 from chromosome Y, complete sequence Length = 155644 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 12154 aaactctaaaaagtcttatattta 12177
>gb|AC147159.2| Mus musculus BAC clone RP24-259B7 from chromosome Y, complete sequence Length = 150659 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 18502 aaactctaaaaagtcttatattta 18479
>gb|AC144552.3| Mus musculus BAC clone RP24-271M6 from chromosome Y, complete sequence Length = 166988 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 126606 aaactctaaaaagtcttatattta 126629
>gb|AC141877.3| Mus musculus BAC clone RP24-280M5 from chromosome Y, complete sequence Length = 143283 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 23362 aaactctaaaaagtcttatattta 23385
>gb|AC145564.4| Mus musculus BAC clone RP24-482K19 from chromosome Y, complete sequence Length = 188188 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 99032 aaactctaaaaagtcttatattta 99055
>gb|AC140474.3| Mus musculus BAC clone RP24-406O7 from chromosome Y, complete sequence Length = 123100 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 66020 aaactctaaaaagtcttatattta 65997
>gb|AC144409.3| Mus musculus BAC clone RP24-302I24 from chromosome Y, complete sequence Length = 148555 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 36911 aaactctaaaaagtcttatattta 36888
>gb|AC132285.4| Mus musculus BAC clone RP24-354N13 from chromosome Y, complete sequence Length = 166915 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 94542 aaactctaaaaagtcttatattta 94565
>gb|AC144581.3| Mus musculus BAC clone RP24-341C2 from chromosome Y, complete sequence Length = 162743 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 87208 aaactctaaaaagtcttatattta 87231
>ref|XM_803137.1| Trypanosoma cruzi strain CL Brener proteasome alpha 5 subunit (Tc00.1047053511145.43) partial mRNA Length = 738 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 ttcttccataacctgcttcaggat 468 ||||||||| |||||||||||||| Sbjct: 624 ttcttccatcacctgcttcaggat 601
>ref|XM_806426.1| Trypanosoma cruzi strain CL Brener proteasome alpha 5 subunit (Tc00.1047053504069.53) partial mRNA Length = 738 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 ttcttccataacctgcttcaggat 468 ||||||||| |||||||||||||| Sbjct: 624 ttcttccatcacctgcttcaggat 601
>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence Length = 120527 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 54 aaaaggtcttatatttaggaaccgatggagta 85 |||||||||||||| ||||||| |||||||| Sbjct: 107407 aaaaggtcttatatataggaacgaatggagta 107438
>gb|AC119419.9| Medicago truncatula clone mth2-6b12, complete sequence Length = 106395 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 54 aaaaggtcttatatttaggaaccgatggagta 85 ||||||||||||| |||||||| || |||||| Sbjct: 67050 aaaaggtcttataattaggaacggaaggagta 67019
>emb|AL645698.1| Human DNA sequence from clone RP5-1070D5 on chromosome 1, complete sequence Length = 15023 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 cctgcttcaggatagaaagg 475 |||||||||||||||||||| Sbjct: 6684 cctgcttcaggatagaaagg 6703
>emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chromosome 1 Contains a novel gene, the LHX9 gene for LIM homeobox 9 and a CpG island, complete sequence Length = 182527 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 tgaaaaataattctttttgg 223 |||||||||||||||||||| Sbjct: 37692 tgaaaaataattctttttgg 37711
>gb|AC175667.3| Mus musculus BAC clone RP24-372I14 from chromosome y, complete sequence Length = 167889 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 10929 aaactctaaaaagtcttatattta 10906
>gb|BT009452.1| Triticum aestivum clone wlmk8.pk0022.f7:fis, full insert mRNA sequence Length = 1996 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cattttgctccgtatgtagt 36 |||||||||||||||||||| Sbjct: 871 cattttgctccgtatgtagt 890
>gb|AC142409.4| Mus musculus BAC clone RP24-185L20 from chromosome y, complete sequence Length = 150886 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 127011 aaactctaaaaagtcttatattta 127034
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ttatatttaggaaccgatggagtacaaa 89 ||||||||||| || ||||||||||||| Sbjct: 68380 ttatatttagggacggatggagtacaaa 68407
>gb|AC174232.4| Mus musculus BAC clone RP24-66G1 from chromosome y, complete sequence Length = 196032 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 40971 aaactctaaaaagtcttatattta 40994
>emb|AJ295252.1|TCR295252 Trypanosoma cruzi mRNA for proteasome subunit alpha5 (PRCZ gene) Length = 910 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 ttcttccataacctgcttcaggat 468 ||||||||| |||||||||||||| Sbjct: 650 ttcttccatcacctgcttcaggat 627
>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the gene for a novel protein (3732413I11Rik), a novel gene (4930597A21Rik), the 5' end of the Ebf1 gene for early B-cell factor 1, a novel gene and a CpG island, complete sequence Length = 215524 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 taaacaaacgaatgactgga 267 |||||||||||||||||||| Sbjct: 158298 taaacaaacgaatgactgga 158279
>gb|AC184105.1| Mus musculus chromosome UNK clone CH35-62A13, complete sequence Length = 168299 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 24712 aaactctaaaaagtcttatattta 24735
>gb|AC184103.1| Mus musculus chromosome UNK clone CH35-73N5, complete sequence Length = 179651 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 70760 aaactctaaaaagtcttatattta 70783
>gb|AC182253.3| Mus musculus BAC clone RP24-320A8 from chromosome y, complete sequence Length = 181955 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 9091 aaactctaaaatgtcttatattta 9068
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 ctatggtctctgcctcagcg 496 |||||||||||||||||||| Sbjct: 2859001 ctatggtctctgcctcagcg 2858982
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caattccttgttgtactgct 521 |||||||||||||||||||| Sbjct: 735040 caattccttgttgtactgct 735059
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gtttggggtcaccttttctt 449 |||||||||||||||||||| Sbjct: 59604 gtttggggtcaccttttctt 59585
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gtttggggtcaccttttctt 449 |||||||||||||||||||| Sbjct: 157651 gtttggggtcaccttttctt 157632
>gb|AC182448.2| Mus musculus BAC clone RP24-490J20 from chromosome y, complete sequence Length = 222797 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 115744 aaactctaaaaagtcttatattta 115767
>gb|AC182730.2| Mus musculus BAC clone RP24-254G5 from chromosome y, complete sequence Length = 162064 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 110817 aaactctaaaaagtcttatattta 110794
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 tggtggtacaacgtcttagtgcta 244 ||||||||| |||||||||||||| Sbjct: 535253 tggtggtaccacgtcttagtgcta 535276
>ref|NM_079730.2| Drosophila melanogaster klingon CG6669-RA (klg), mRNA Length = 4037 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 attctttttggtggtacaac 232 |||||||||||||||||||| Sbjct: 3269 attctttttggtggtacaac 3250
>gb|AC182761.2| Mus musculus BAC clone RP24-91P5 from chromosome y, complete sequence Length = 212528 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 188019 aaactctaaaaagtcttatattta 188042
>gb|AC175744.2| Mus musculus BAC clone RP24-163J18 from chromosome y, complete sequence Length = 147935 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 139359 aaactctaaaaagtcttatattta 139382
>gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosome y, complete sequence Length = 174066 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 138293 aaactctaaaaagtcttatattta 138316
>gb|AC175381.3| Mus musculus BAC clone RP24-195K22 from chromosome y, complete sequence Length = 159477 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 123479 aaactctaaaaagtcttatattta 123456
>gb|AY060363.1| Drosophila melanogaster LD10776 full length cDNA Length = 4052 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 attctttttggtggtacaac 232 |||||||||||||||||||| Sbjct: 3269 attctttttggtggtacaac 3250
>gb|U78177.1|DMU78177 Drosophila melanogaster Klingon (klingon) mRNA, complete cds Length = 3927 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 attctttttggtggtacaac 232 |||||||||||||||||||| Sbjct: 3159 attctttttggtggtacaac 3178
>gb|AC182034.2| Mus musculus BAC clone RP24-188M3 from chromosome y, complete sequence Length = 164621 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 35104 aaactctaaaaagtcttatattta 35127
>gb|AC155301.2| Mus musculus BAC clone RP24-216J21 from chromosome 13, complete sequence Length = 192299 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tagttttctagtgaaaactc 52 |||||||||||||||||||| Sbjct: 138211 tagttttctagtgaaaactc 138192
>gb|AC181976.2| Mus musculus BAC clone RP24-413C10 from chromosome y, complete sequence Length = 150838 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 127327 aaactctaaaaagtcttatattta 127304
>gb|AC175461.3| Mus musculus BAC clone RP24-64J17 from chromosome y, complete sequence Length = 219754 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 134974 aaactctaaaaagtcttatattta 134997
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ttatatttaggaaccgatggagtacaaa 89 ||||||||||| || ||||||||||||| Sbjct: 26291803 ttatatttagggacggatggagtacaaa 26291830
>gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone BACR01K08, complete sequence Length = 177127 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 attctttttggtggtacaac 232 |||||||||||||||||||| Sbjct: 52886 attctttttggtggtacaac 52867
>gb|AC145572.4| Mus musculus BAC clone RP24-95P13 from chromosome y, complete sequence Length = 181745 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 162253 aaactctaaaaagtcttatattta 162276
>gb|AC175389.2| Mus musculus BAC clone RP24-152N3 from chromosome y, complete sequence Length = 123765 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 54941 aaactctaaaaagtcttatattta 54918
>gb|AC175033.2| Mus musculus BAC clone RP24-283I7 from chromosome y, complete sequence Length = 153678 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 46158 aaactctaaaaagtcttatattta 46181
>gb|AC140452.4| Mus musculus BAC clone RP24-120F24 from chromosome unknown, complete sequence Length = 199125 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 120466 aaactctaaaaagtcttatattta 120489 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 114457 aaactctaaaaagtcttatattta 114480
>gb|AC147927.3| Ovis aries clone CH243-129I22, complete sequence Length = 187152 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 tttctagtgaaaactctaaaaggt 60 ||||||||||||||| |||||||| Sbjct: 70256 tttctagtgaaaactttaaaaggt 70233
>emb|BX322587.10| Zebrafish DNA sequence from clone RP71-36A1 in linkage group 22, complete sequence Length = 104515 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tatgtagttttctagtgaaa 48 |||||||||||||||||||| Sbjct: 74866 tatgtagttttctagtgaaa 74885
>gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-60d3, complete sequence Length = 100208 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 54 aaaaggtcttatatttaggaaccgatggagta 85 |||||||||||||| ||||||| |||||||| Sbjct: 46070 aaaaggtcttatatataggaacgaatggagta 46039
>gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79 of 118 of the complete sequence Length = 233356 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 attctttttggtggtacaac 232 |||||||||||||||||||| Sbjct: 80784 attctttttggtggtacaac 80765
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gtttggggtcaccttttctt 449 |||||||||||||||||||| Sbjct: 85095 gtttggggtcaccttttctt 85114
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 accgcttcaacctctgcagg 384 |||||||||||||||||||| Sbjct: 1363782 accgcttcaacctctgcagg 1363801
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 ttcaggatagaaagggctat 480 |||||||||||||||||||| Sbjct: 775357 ttcaggatagaaagggctat 775338
>emb|CT010471.11| Mouse DNA sequence from clone RP23-20A5 on chromosome 13, complete sequence Length = 219145 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tagttttctagtgaaaactc 52 |||||||||||||||||||| Sbjct: 104944 tagttttctagtgaaaactc 104925
>gb|AC145583.3| Mus musculus BAC clone RP24-154F7 from Y, complete sequence Length = 154648 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 6290 aaactctaaaaagtcttatattta 6313
>gb|AC150659.3| Mus musculus BAC clone RP24-147D24 from Y, complete sequence Length = 145892 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 21980 aaactctaaaaagtcttatattta 21957
>gb|AC145597.4| Mus musculus BAC clone RP24-323M2 from Y, complete sequence Length = 199904 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 93046 aaactctaaaaagtcttatattta 93023 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 31448 aaactctaaaaagtcttatattta 31425
>gb|AC145601.4| Mus musculus BAC clone RP24-229P8 from Y, complete sequence Length = 165064 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 156287 aaactctaaaaagtcttatattta 156264
>gb|AC145485.4| Mus musculus BAC clone RP24-228I22 from Y, complete sequence Length = 144640 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 12416 aaactctaaaatgtcttatattta 12439
>gb|AC140924.4| Mus musculus BAC clone RP24-249B5 from Y, complete sequence Length = 200241 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 198389 aaactctaaaaagtcttatattta 198412
>gb|AC142490.3| Mus musculus BAC clone RP24-362J19 from Y, complete sequence Length = 184480 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 aaactctaaaaggtcttatattta 70 ||||||||||| |||||||||||| Sbjct: 147427 aaactctaaaaagtcttatattta 147450 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,697,793 Number of Sequences: 3902068 Number of extensions: 5697793 Number of successful extensions: 106002 Number of sequences better than 10.0: 255 Number of HSP's better than 10.0 without gapping: 257 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 104871 Number of HSP's gapped (non-prelim): 1102 length of query: 528 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 505 effective length of database: 17,143,297,704 effective search space: 8657365340520 effective search space used: 8657365340520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
