ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart20d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0 105 4e-23
2RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0 105 6e-23
3RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0 100 1e-21
4RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A 91 1e-18
5RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B 87 1e-17
6RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C 87 1e-17
7RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0 80 2e-15
8RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E) 75 9e-14
9RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E) 72 6e-13
10RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E) 72 8e-13
11RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E) 70 2e-12
12RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E) 69 4e-12
13RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E) 69 6e-12
14RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurin... 69 6e-12
15RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Frag... 67 1e-11
16RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E) 67 2e-11
17RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0) 67 2e-11
18RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0 59 7e-09
19RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0 58 9e-09
20RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0 54 2e-07
21RLA0_DICDI (P22685) 60S acidic ribosomal protein P0 52 5e-07
22RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E) 52 5e-07
23RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0 49 4e-06
24RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0 49 7e-06
25RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0 49 7e-06
26RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0 37 0.021
27RLA0_LEICH (P39096) 60S acidic ribosomal protein P0 30 3.3
28RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0 30 3.3
29RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induc... 29 4.3
30Y421_METJA (Q57864) Hypothetical protein MJ0421 29 5.7
31AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor... 29 5.7
32Y4254_ANAVT (Q44491) Hypothetical protein Ava_4254 28 9.7

>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  105 bits (263), Expect = 4e-23
 Identities = 54/90 (60%), Positives = 59/90 (65%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           LAISYPT+AAAPHMFLN YKNVLAVA+ET+YSY HADKIKEYLKDPSKFAV         
Sbjct: 229 LAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSG 288

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                              SDG++G SLFD
Sbjct: 289 AAAPSAAKEEEKKEEPEEESDGDLGMSLFD 318



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>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  105 bits (261), Expect = 6e-23
 Identities = 56/91 (61%), Positives = 59/91 (64%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           LAISYPT+AA PHMF+N YKNVLAVA+ETDYSY HADKIKEYLKDPSKFAV         
Sbjct: 229 LAISYPTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIKEYLKDPSKFAV-AAPVAAGD 287

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 163
                              SD EMGFSLFDD
Sbjct: 288 SGASAAPKEEEKAAEPEEESDEEMGFSLFDD 318



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>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0|
          Length = 320

 Score =  100 bits (250), Expect = 1e-21
 Identities = 53/91 (58%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXX-XXX 259
           LAISYPT+AAAPHMF+NAYKNVLAVA+ETDYS+  ADK+KEYLKDPSKFAV         
Sbjct: 230 LAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAA 289

Query: 258 XXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                               SD +MGFSLFD
Sbjct: 290 SGAPAAAAKEEEKKEEPAEESDDDMGFSLFD 320



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>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A|
          Length = 317

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 48/89 (53%), Positives = 56/89 (62%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           LAISYPT+AAAPHMFLNAYKNVLAVAL T+YS+  A+ +KE+LKDP+KFAV         
Sbjct: 230 LAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAV--AVAAPVS 287

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLF 169
                              SDG+MGF LF
Sbjct: 288 GESGGAVVAVAVEEEAAEESDGDMGFDLF 316



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>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B|
          Length = 320

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 42/91 (46%), Positives = 53/91 (58%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           LA+SYPT+AAAPHMF+NAYKN LA+A+ T+Y++  A+K+KEYLKDPSKFAV         
Sbjct: 229 LAVSYPTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSAD 288

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 163
                               D    F LFD+
Sbjct: 289 AGGGAPAAAKVEEKEESDEEDYGGDFGLFDE 319



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>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C|
          Length = 323

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           LA+SYPT+AAAPHMF+NAYKN LA+A+ TDY++  A+K+KE+LKDPSKF V         
Sbjct: 229 LAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADA 288

Query: 255 XXXXXXXXXXXXXXXXXXXSDG---EMGFSLFDD 163
                              SD    E GF LFD+
Sbjct: 289 GGGSAQAGAAAKVEEKKEESDEEDYEGGFGLFDE 322



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>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0|
          Length = 322

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 41/88 (46%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
 Frame = -1

Query: 420 PTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXX 241
           P  +AAPH+F+NAYKNVLAVA+ T+YS+  AD++KEYLKDPSKFA               
Sbjct: 235 PNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPAADSGAA 294

Query: 240 XXXXXXXXXXX--XXXSDGEMGFSLFDD 163
                           SD EMGF LFD+
Sbjct: 295 PAAAAKAEKEEEPAEESDDEMGFGLFDE 322



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>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)|
          Length = 319

 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 37/90 (41%), Positives = 47/90 (52%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           L I YPT+A+ PH  +N YK VLAV +ETDY++  A+K+K YL DP+ FAV         
Sbjct: 230 LQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPTAFAVAAPVAAATE 289

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                              SD +MGF LFD
Sbjct: 290 QKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319



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>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)|
          Length = 316

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 36/90 (40%), Positives = 46/90 (51%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           L I YPT+A+ PH  +N YK VLAVA+ETDY++  A+K+K +L DPS F           
Sbjct: 227 LQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAFVAAAPVVVETA 286

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                              SD +MGF LFD
Sbjct: 287 APAAAAAPAKEAPKEESEESDEDMGFGLFD 316



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>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)|
          Length = 315

 Score = 71.6 bits (174), Expect = 8e-13
 Identities = 38/90 (42%), Positives = 47/90 (52%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           L I YPT+A+ PH  +N YK VLA+A+ETDYS+  ADK+K +L DPS F V         
Sbjct: 227 LQIGYPTVASVPHSVVNGYKRVLALAVETDYSFPLADKVKAFLADPSAFVV-AAPVAETA 285

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                              SD +MGF LFD
Sbjct: 286 AAPAASAAPAKEEKEESEESDDDMGFGLFD 315



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>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 31/51 (60%), Positives = 39/51 (76%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAV 283
           L I YPT+A+ PH  +N YK VL VA+ETDYS+  ADK+K +L DPS+FAV
Sbjct: 227 LQIGYPTLASIPHSIINGYKRVLRVAVETDYSFPMADKVKAFLADPSRFAV 277



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>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXX-XXXXXX 259
           L I YPT+A+ PH  +N YK VLA+++ETDY++  A+K+K +L DPS FA          
Sbjct: 227 LQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFAAAAPVAAATT 286

Query: 258 XXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                               SD +MGF LFD
Sbjct: 287 AAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317



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>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKF-AVXXXXXXXX 259
           L I YPT+A+ PH  +N YK VLA+++ETDY++  A+K+K +L DPS F A         
Sbjct: 227 LQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATT 286

Query: 258 XXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                               SD +MGF LFD
Sbjct: 287 AAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317



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>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
           (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXX-X 259
           L++ YPT+A+APH   N +KN+LA+A  T+  +  A  IKEY+KDPSKFA          
Sbjct: 227 LSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPA 286

Query: 258 XXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                                D +MGF LFD
Sbjct: 287 AGGATEKKEEAKKPESESEEEDDDMGFGLFD 317



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>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)|
          Length = 309

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKF--AVXXXXXXX 262
           L I YPT+A+ PH  +N YK VLA+++ETDY++  A+K+K +L DPS F  A        
Sbjct: 218 LQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAAPA 277

Query: 261 XXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                                SD +MGF LFD
Sbjct: 278 AAPAATTAAPAKVEAKEESEESDEDMGFGLFD 309



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>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXX-XXXXXX 259
           L I YPT+A+ PH  +N YK VLA+++ET+Y++   +K+K +L DPS FA          
Sbjct: 227 LQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLADPSAFAAAAPAAAATT 286

Query: 258 XXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                               SD +MGF LFD
Sbjct: 287 AAPAAAAAPAKAEAKEESEESDEDMGFGLFD 317



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>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)|
          Length = 317

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKF-AVXXXXXXXX 259
           L I YPT+A+APH   N +KN+LA+A  T+  +  A  IKE++KDPSKF A         
Sbjct: 227 LQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFIKDPSKFVAAAAASAPAA 286

Query: 258 XXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                                D +MGF LFD
Sbjct: 287 GAGAAAEKKEEAKKEESESEEDDDMGFGLFD 317



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>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0|
          Length = 311

 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 32/90 (35%), Positives = 43/90 (47%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           LA++YPT+A+  H   N  +N+L VA  TD S+  A+ IK ++ DPSKFA          
Sbjct: 226 LAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKFA----AAAPAA 281

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                              SD +MGF LFD
Sbjct: 282 AAAPAAAAPAAKKEEPKEESDDDMGFGLFD 311



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>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0|
          Length = 312

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 30/90 (33%), Positives = 45/90 (50%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           L  +YPT+ +  H  +NAYKN++AV+L T+Y+++  ++ K +L DPS F V         
Sbjct: 225 LGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFLADPSAFVV--AAAPAAA 282

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                              SD +MGF LFD
Sbjct: 283 AGGEAEAPAAEAAAEEEEESDEDMGFGLFD 312



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>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 27/89 (30%), Positives = 42/89 (47%)
 Frame = -1

Query: 432 AISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXX 253
           A+  P+ AAAPH  L A++N  A+ L+T + +    ++KE +++P+ FA           
Sbjct: 227 AVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVENPAAFA-AAAAPAAAAP 285

Query: 252 XXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                              DG+MGFSLFD
Sbjct: 286 AAAPAAAAKAPEPEEEEEEDGDMGFSLFD 314



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>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0|
          Length = 305

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 21/40 (52%), Positives = 31/40 (77%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 316
           L I YPT+A+ PH  +NA+KN+LA++ ET Y++D A+K K
Sbjct: 223 LEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFK 262



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>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)|
          Length = 312

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 27/90 (30%), Positives = 41/90 (45%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXX 256
           LAI YPT+ +  H  +N YK++LAVA+   Y Y   + + + +++P K+A          
Sbjct: 225 LAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRIENPEKYA--AAAPAATS 282

Query: 255 XXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
                              SD +MGF LFD
Sbjct: 283 AASGDAAPAEEAAAEEEEESDDDMGFGLFD 312



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>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0|
          Length = 313

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 20/50 (40%), Positives = 36/50 (72%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFA 286
           LA+++PT+ +  H  +NAYK VLAVA+ET+ S+   +++K+ + +P  +A
Sbjct: 225 LALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIANPEAYA 274



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>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0|
          Length = 316

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 22/84 (26%), Positives = 41/84 (48%)
 Frame = -1

Query: 417 TMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXX 238
           T A+ PH+F+ A+KN++A+ +++DY++     +K+++++P  FA                
Sbjct: 233 TEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWVENPEAFAAVAAPASAAKADEPKK 292

Query: 237 XXXXXXXXXXXXXSDGEMGFSLFD 166
                         DG MGF +FD
Sbjct: 293 EEAKKVEEEEEEEEDGFMGFGMFD 316



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>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 19/50 (38%), Positives = 36/50 (72%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFA 286
           LA+++PT+ +  H  +N+YK VLAVA+ET+ S+   +++K+ + +P  +A
Sbjct: 225 LALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIANPEAYA 274



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>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 37.0 bits (84), Expect = 0.021
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHAD 325
           L    PT A  PHM ++A+K +L  ++ T+Y +D  D
Sbjct: 234 LGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270



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>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0|
          Length = 322

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 334
           L    PT +    M ++A+KN+LAV++ T Y ++
Sbjct: 233 LGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 266



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>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 435 LAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 334
           L    PT +    M ++A+KN+LAV++ T Y ++
Sbjct: 234 LGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 267



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>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa|
           protein)
          Length = 321

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 435 LAISYPTMAAAPH 397
           LAISYPT+AAAPH
Sbjct: 230 LAISYPTLAAAPH 242



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>Y421_METJA (Q57864) Hypothetical protein MJ0421|
          Length = 360

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = -1

Query: 378 KNVLAVALETDYSYDH----ADKIKEYLKDPSKFAV 283
           + VL V  ET+  +D     A+KIK+Y+K+   FAV
Sbjct: 58  ERVLKVYFETETDFDKIVNLAEKIKDYIKEDETFAV 93



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>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250|
           kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin)
          Length = 1781

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 327 QHGHTSSLSPKRPQEHSCMH*GTCAVQQ 410
           Q G +S+ SP+ P+E +C+  G   VQQ
Sbjct: 560 QKGESSASSPEEPEEITCLEKGLAEVQQ 587



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>Y4254_ANAVT (Q44491) Hypothetical protein Ava_4254|
          Length = 86

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 381 YKNVLAVALETDYSYDHADKIKEYLKDPSK 292
           Y+N+ A+A ET   Y H D++K  LK   K
Sbjct: 51  YQNLTALAAETYEIYRHLDELKSQLKSLEK 80


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,652,953
Number of Sequences: 219361
Number of extensions: 683985
Number of successful extensions: 1910
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1903
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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