ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart20d05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, partial cds Length = 1308 Score = 321 bits (162), Expect = 1e-84 Identities = 258/290 (88%) Strand = Plus / Minus Query: 185 cacgcgtgagctagcatggacgattaaccaatctctcacatggcggcggcgtgtccctcg 244 ||||||||||||||||| || | |||| ||||||||||||||||| | ||| |||||| Sbjct: 1088 cacgcgtgagctagcatcgataactaactgatctctcacatggcggccgtgtggccctcg 1029 Query: 245 tcgttggcggtctcgataccctcgacacgcctgttggggacggcgcagttctgccggatc 304 ||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 1028 tcgttggcggtctcgatgacatcgacgcgcctattggggacggcgcagttctgccggatc 969 Query: 305 tcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatggacatggcgaac 364 || ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 968 tcaccctgggtgccagtgagcaagtccatgttgctcatcttcaccatggacttggcgaac 909 Query: 365 tgcctgaagaaggcagactggctgagcgcgaaccgcgtggtcaagagcctcgtgtcgggg 424 |||| ||||||||| || ||| ||||||| ||||| | | |||||||||||| |||||| Sbjct: 908 tgccggaagaaggcggattggatgagcgcaaaccgtgaagccaagagcctcgtctcgggg 849 Query: 425 tggtcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 |||||||||||| ||||||| |||||||||| |||||||| |||||||| Sbjct: 848 tggtcgatgaggccctggtccgacttgaacaggccctgcctcacgatgag 799 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 122 attttattacaacacgaacgacgactggacaaaacgactagcagaaggacaccatctcca 181 |||||||||||||||| ||||| |||| | ||||||||||||| |||||||||||||||| Sbjct: 1174 attttattacaacacgtacgacaactgcagaaaacgactagcacaaggacaccatctcca 1115 Query: 182 gtgc 185 |||| Sbjct: 1114 gtgc 1111
>gb|AY857763.1| Triticum monococcum peroxidase 9 (POX9) mRNA, partial cds Length = 760 Score = 244 bits (123), Expect = 2e-61 Identities = 216/247 (87%) Strand = Plus / Minus Query: 209 taaccaatctctcacatggcggcggcgtgtccctcgtcgttggcggtctcgataccctcg 268 |||||||||||| ||||||||||||| || ||||||||| ||||||||||||| |||| | Sbjct: 628 taaccaatctcttacatggcggcggcatggccctcgtcgctggcggtctcgatgcccttg 569 Query: 269 acacgcctgttggggacggcgcagttctgccggatctcgccctgggtgccggtgagcaag 328 ||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 568 acacggctgttggggacggcgcagttgaaccggatctcgccctggctgccggtgagcaag 509 Query: 329 tccatgttgctcatcttcaccatggacatggcgaactgcctgaagaaggcagactggctg 388 |||||||||||||||||||||||||| ||||||||||| |||||| || |||| || Sbjct: 508 tccatgttgctcatcttcaccatggatttggcgaactgctcgaagaatgccccctggttg 449 Query: 389 agcgcgaaccgcgtggtcaagagcctcgtgtcggggtggtcgatgagggcctggtcggac 448 |||| ||||||||| | || | || | |||| ||||||| |||||||| ||||||| ||| Sbjct: 448 agcgagaaccgcgtcgccatgcgcgtggtgttggggtggacgatgaggccctggtccgac 389 Query: 449 ttgaaca 455 ||||||| Sbjct: 388 ttgaaca 382
>emb|AJ878510.1| Triticum aestivum mRNA for peroxidase precursor (prx gene), cultivar Cheyenne Length = 1226 Score = 161 bits (81), Expect = 3e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 249 tggcggtctcgataccctcgacacgcctgttggggacggcgcagttctgccggatctcgc 308 |||||||||||||| ||| |||||||||||||||| |||||||||| | ||||||||||| Sbjct: 1070 tggcggtctcgatatcctggacacgcctgttgggggcggcgcagttgttccggatctcgc 1011 Query: 309 cctgggtgccggtgagcaagtccatgttgctcatcttcaccatggacatggcgaactgcc 368 ||| | |||||||||| | |||||||||||||||||| ||||||| |||||||||| Sbjct: 1010 ccttgttgccggtgaggaggtccatgttgctcatcttggtcatggaccgggcgaactgct 951 Query: 369 tgaagaaggcagactggctgagcgcgaaccgcgtggtcaagagcctcgtgtcggggtggt 428 ||||||||| |||| |||||| ||| || |||| || | || | ||| |||||||| Sbjct: 950 cgaagaaggcgccctggttgagcgagaagcgggtggccatgcgcttggtggtggggtggt 891 Query: 429 cgatgagggcctggtcggacttgaacaatccctgcct 465 |||||||| ||||||| |||||||||| |||||||| Sbjct: 890 cgatgaggccctggtccgacttgaacaggccctgcct 854
>emb|AJ003141.1|HVAJ3141 Hordeum vulgare mRNA for stress-related peroxidase Length = 1245 Score = 135 bits (68), Expect = 1e-28 Identities = 179/216 (82%) Strand = Plus / Minus Query: 250 ggcggtctcgataccctcgacacgcctgttggggacggcgcagttctgccggatctcgcc 309 |||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||| Sbjct: 1082 ggcggtctcgatgtcctggacacgcctgttggggacggcgcagttgttccggatctcgcc 1023 Query: 310 ctgggtgccggtgagcaagtccatgttgctcatcttcaccatggacatggcgaactgcct 369 || |||||||||||| | |||||||||||||||||| ||||||| | ||||||||| Sbjct: 1022 cttggtgccggtgagaatgtccatgttgctcatcttggtcatggacctcgcgaactgctc 963 Query: 370 gaagaaggcagactggctgagcgcgaaccgcgtggtcaagagcctcgtgtcggggtggtc 429 |||||| || |||| |||| | ||| || |||| || | || | ||| |||||||| Sbjct: 962 gaagaaagcgccctggttgagggagaagcgggtggccatgcgcttggtggtcgggtggtc 903 Query: 430 gatgagggcctggtcggacttgaacaatccctgcct 465 ||| ||| ||||||| |||||||||| |||||||| Sbjct: 902 gatcaggccctggtccgacttgaacagcccctgcct 867
>emb|X62438.1|HVPERO H.vulgare mRNA for peroxidase Length = 740 Score = 127 bits (64), Expect = 4e-26 Identities = 179/216 (82%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 250 ggcggtctcgataccctcgacacgcctgttggggacggcgcagttctgccggatctcgcc 309 |||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||| Sbjct: 485 ggcggtctcgatgtcct-gacacgcctgttggggacggcgcagttgttccggatctcgcc 427 Query: 310 ctgggtgccggtgagcaagtccatgttgctcatcttcaccatggacatggcgaactgcct 369 || |||||||||||| | |||||||||||||||||| ||||||| | ||||||||| Sbjct: 426 cttggtgccggtgagaatgtccatgttgctcatcttggtcatggacctcgcgaactgctc 367 Query: 370 gaagaaggcagactggctgagcgcgaaccgcgtggtcaagagcctcgtgtcggggtggtc 429 |||||| || |||| |||| | ||| || |||| || | || | ||| |||||||| Sbjct: 366 gaagaaagcgccctggttgagggagaagcgtgtggccatgcgcttggtggtcgggtggtc 307 Query: 430 gatgagggcctggtcggacttgaacaatccctgcct 465 ||| ||| ||||||| |||||||||| |||||||| Sbjct: 306 gatcaggccctggtccgacttgaacagcccctgcct 271
>gb|AY110269.1| Zea mays CL1874_1 mRNA sequence Length = 1321 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 315 tgccggtgagcaagtccatgttgctcatcttcaccatggacatggcgaactgcctgaaga 374 |||||||||| | |||||| | ||||||||||||||||||| |||||||||| ||||| Sbjct: 1026 tgccggtgaggatgtccatctggctcatcttcaccatggacctggcgaactggtcgaaga 967 Query: 375 aggcagactggctgagcgcgaaccgcgtggtcaagagcctcgtgtcggggtggtcgatga 434 |||| | |||| |||||||||| || |||| | | || | ||||| ||||||| ||||| Sbjct: 966 aggcggcctggttgagcgcgaagcgggtggccgcgcgcttggtgtccgggtggttgatga 907 Query: 435 gggcctggtcggacttgaacaatccctgcctgacgatgag 474 || ||||||| |||||||| | |||||| || ||||||| Sbjct: 906 ggccctggtccgacttgaagagcccctgcttggcgatgag 867
>emb|Y13905.1|ZMY13905 Zea mays mRNA for anionic peroxidase Length = 1248 Score = 93.7 bits (47), Expect = 5e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 315 tgccggtgagcaagtccatgttgctcatcttcaccatggacatggcgaactgcctgaaga 374 |||||||||| | |||||| | ||||||||||||||||||| |||||||||| ||||| Sbjct: 1026 tgccggtgaggatgtccatctggctcatcttcaccatggacctggcgaactggtcgaaga 967 Query: 375 aggcagactggctgagcgcgaaccgcgtggtcaagagcctcgtgtcggggtggtcgatga 434 |||| | |||| |||||||||| || |||| | | || | ||||| ||||||| ||||| Sbjct: 966 aggcggcctggttgagcgcgaagcgggtggccgcgcgcttggtgtccgggtggttgatga 907 Query: 435 gggcctggtcggacttgaa 453 || ||||||| |||||||| Sbjct: 906 ggccctggtccgacttgaa 888
>ref|XM_476365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 744 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatgga 354 |||||||||||| | |||||||||| ||| ||| ||||||||||||||||||| Sbjct: 489 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatgga 436
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatgga 354 |||||||||||| | |||||||||| ||| ||| ||||||||||||||||||| Sbjct: 236074 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatgga 236021
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatgga 354 |||||||||||| | |||||||||| ||| ||| ||||||||||||||||||| Sbjct: 70938 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatgga 70885
>dbj|AK107894.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E12, full insert sequence Length = 744 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatgga 354 |||||||||||| | |||||||||| ||| ||| ||||||||||||||||||| Sbjct: 489 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatgga 436
>tpe|BN000626.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx97 gene for class III peroxidase 97 precursor, exons 1-2 Length = 1107 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatgga 354 |||||||||||| | |||||||||| ||| ||| ||||||||||||||||||| Sbjct: 1077 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatgga 1024
>ref|XM_473984.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 987 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatggac 355 |||||| ||||||| ||||||||||| | |||||| | |||||||||||||||| Sbjct: 960 gatctccccctgggcgccggtgagcacctgcatgttccccatcttcaccatggac 906
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatggac 355 |||||| ||||||| ||||||||||| | |||||| | |||||||||||||||| Sbjct: 32006713 gatctccccctgggcgccggtgagcacctgcatgttccccatcttcaccatggac 32006659 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 347 accatggacatggcgaactgcctgaagaa 375 ||||||||| ||||||||||||||||||| Sbjct: 35258121 accatggacttggcgaactgcctgaagaa 35258149 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 347 accatggacatggcgaactgcctgaagaaggc 378 ||||||||| ||||||||||| |||||||||| Sbjct: 35280835 accatggacttggcgaactgcgtgaagaaggc 35280866 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 428 tcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 ||||||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 35223031 tcgatgaggccctggtcggacttgaagatcccctgcttggcgatgag 35223077 Score = 44.1 bits (22), Expect = 0.41 Identities = 58/70 (82%) Strand = Plus / Plus Query: 285 cggcgcagttctgccggatctcgccctgggtgccggtgagcaagtccatgttgctcatct 344 |||||||||| | ||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 35222888 cggcgcagttgttgcggatctcgccggcgttgccggtgaggacgtccatctggctcatct 35222947 Query: 345 tcaccatgga 354 | |||||||| Sbjct: 35222948 tgaccatgga 35222957 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 340 catcttcaccatggacatggcgaactgcctgaagaag 376 |||||| ||||||||| ||||||||||| ||||||| Sbjct: 20964327 catcttgaccatggacttggcgaactgcgcgaagaag 20964291
>dbj|AK068148.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134G11, full insert sequence Length = 3544 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatggac 355 |||||| ||||||| ||||||||||| | |||||| | |||||||||||||||| Sbjct: 3331 gatctccccctgggcgccggtgagcacctgcatgttccccatcttcaccatggac 3277
>tpe|BN000585.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx56 gene for class III peroxidase 56 precursor, exons 1-4 Length = 1918 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatggac 355 |||||| ||||||| ||||||||||| | |||||| | |||||||||||||||| Sbjct: 1891 gatctccccctgggcgccggtgagcacctgcatgttccccatcttcaccatggac 1837
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatggac 355 |||||| ||||||| ||||||||||| | |||||| | |||||||||||||||| Sbjct: 27420 gatctccccctgggcgccggtgagcacctgcatgttccccatcttcaccatggac 27366
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 289 gcagttctgccggatctcgccctgggtgccggtgagca 326 |||||||| |||||||||||||||| ||||||||||| Sbjct: 20926200 gcagttcttccggatctcgccctggtcgccggtgagca 20926237
>dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A03, full insert sequence Length = 1325 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 289 gcagttctgccggatctcgccctgggtgccggtgagca 326 |||||||| |||||||||||||||| ||||||||||| Sbjct: 1110 gcagttcttccggatctcgccctggtcgccggtgagca 1073
>tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx138 gene for class III peroxidase 138 precursor, exons 1-4 Length = 9140 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 289 gcagttctgccggatctcgccctgggtgccggtgagca 326 |||||||| |||||||||||||||| ||||||||||| Sbjct: 9119 gcagttcttccggatctcgccctggtcgccggtgagca 9082
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 289 gcagttctgccggatctcgccctgggtgccggtgagca 326 |||||||| |||||||||||||||| ||||||||||| Sbjct: 20852414 gcagttcttccggatctcgccctggtcgccggtgagca 20852451
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 289 gcagttctgccggatctcgccctgggtgccggtgagca 326 |||||||| |||||||||||||||| ||||||||||| Sbjct: 11690 gcagttcttccggatctcgccctggtcgccggtgagca 11727
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 289 gcagttctgccggatctcgccctgggtgccggtgagca 326 |||||||| |||||||||||||||| ||||||||||| Sbjct: 32795 gcagttcttccggatctcgccctggtcgccggtgagca 32758
>ref|XM_474450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 347 accatggacatggcgaactgcctgaagaa 375 ||||||||| ||||||||||||||||||| Sbjct: 887 accatggacttggcgaactgcctgaagaa 859
>ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 297 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 345 |||||||||| ||| ||| ||||||||||| ||| ||||||| |||||| Sbjct: 955 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 907
>gb|DQ376124.1| Eucalyptus globulus subsp. globulus peroxidase (Px1) mRNA, partial cds Length = 957 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 332 atgttgctcatcttcaccatggacatggcgaactgcctgaagaag 376 ||||||| |||||| ||||||||| ||||||||||| ||||||| Sbjct: 734 atgttgcccatcttgaccatggacttggcgaactgctcgaagaag 690
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 297 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 345 |||||||||| ||| ||| ||||||||||| ||| ||||||| |||||| Sbjct: 12552449 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 12552401 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 340 catcttcaccatggacatggcgaactg 366 ||||||||||||||||| ||||||||| Sbjct: 42439685 catcttcaccatggacacggcgaactg 42439659
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 297 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 345 |||||||||| ||| ||| ||||||||||| ||| ||||||| |||||| Sbjct: 64059 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 64011
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 297 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 345 |||||||||| ||| ||| ||||||||||| ||| ||||||| |||||| Sbjct: 138064 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 138016
>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full insert sequence Length = 1492 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 297 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 345 |||||||||| ||| ||| ||||||||||| ||| ||||||| |||||| Sbjct: 1030 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 982
>dbj|AK070680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060N16, full insert sequence Length = 2256 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 347 accatggacatggcgaactgcctgaagaa 375 ||||||||| ||||||||||||||||||| Sbjct: 912 accatggacttggcgaactgcctgaagaa 884
>dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B01, full insert sequence Length = 1015 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 297 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 345 |||||||||| ||| ||| ||||||||||| ||| ||||||| |||||| Sbjct: 719 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 671
>tpe|BN000592.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx63 gene for class III peroxidase 63 precursor, exons 1-2 Length = 1098 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 347 accatggacatggcgaactgcctgaagaa 375 ||||||||| ||||||||||||||||||| Sbjct: 977 accatggacttggcgaactgcctgaagaa 949
>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for class III peroxidase 15 precursor, exons 1-3 Length = 5322 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 297 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 345 |||||||||| ||| ||| ||||||||||| ||| ||||||| |||||| Sbjct: 5215 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 5167
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 347 accatggacatggcgaactgcctgaagaa 375 ||||||||| ||||||||||||||||||| Sbjct: 53966 accatggacttggcgaactgcctgaagaa 53994 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 347 accatggacatggcgaactgcctgaagaaggc 378 ||||||||| ||||||||||| |||||||||| Sbjct: 76680 accatggacttggcgaactgcgtgaagaaggc 76711 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 428 tcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 ||||||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 18876 tcgatgaggccctggtcggacttgaagatcccctgcttggcgatgag 18922 Score = 44.1 bits (22), Expect = 0.41 Identities = 58/70 (82%) Strand = Plus / Plus Query: 285 cggcgcagttctgccggatctcgccctgggtgccggtgagcaagtccatgttgctcatct 344 |||||||||| | ||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 18733 cggcgcagttgttgcggatctcgccggcgttgccggtgaggacgtccatctggctcatct 18792 Query: 345 tcaccatgga 354 | |||||||| Sbjct: 18793 tgaccatgga 18802
>ref|XM_474454.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1017 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 347 accatggacatggcgaactgcctgaagaaggc 378 ||||||||| ||||||||||| |||||||||| Sbjct: 887 accatggacttggcgaactgcgtgaagaaggc 856
>gb|AY074794.1| Gossypium hirsutum bacterial-induced peroxidase (pod2) mRNA, complete cds Length = 1330 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 332 atgttgctcatcttcaccatggac 355 |||||||||||||||||||||||| Sbjct: 1028 atgttgctcatcttcaccatggac 1005
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 347 accatggacatggcgaactgcctgaagaaggc 378 ||||||||| ||||||||||| |||||||||| Sbjct: 72399 accatggacttggcgaactgcgtgaagaaggc 72368 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 428 tcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 ||||||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 90430 tcgatgaggccctggtcggacttgaagatcccctgcttggcgatgag 90384 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 347 accatggacatggcgaactgcctgaagaa 375 ||||||||| ||||||||||| ||||||| Sbjct: 75706 accatggacttggcgaactgcgtgaagaa 75678
>dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A01, full insert sequence Length = 1240 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 347 accatggacatggcgaactgcctgaagaaggc 378 ||||||||| ||||||||||| |||||||||| Sbjct: 953 accatggacttggcgaactgcgtgaagaaggc 922
>tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx64 gene for class III peroxidase 64 precursor, exons 1-2 Length = 1091 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 347 accatggacatggcgaactgcctgaagaaggc 378 ||||||||| ||||||||||| |||||||||| Sbjct: 961 accatggacttggcgaactgcgtgaagaaggc 930
>ref|XM_474444.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 428 tcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 ||||||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 827 tcgatgaggccctggtcggacttgaagatcccctgcttggcgatgag 781 Score = 44.1 bits (22), Expect = 0.41 Identities = 58/70 (82%) Strand = Plus / Minus Query: 285 cggcgcagttctgccggatctcgccctgggtgccggtgagcaagtccatgttgctcatct 344 |||||||||| | ||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 970 cggcgcagttgttgcggatctcgccggcgttgccggtgaggacgtccatctggctcatct 911 Query: 345 tcaccatgga 354 | |||||||| Sbjct: 910 tgaccatgga 901
>ref|NM_189377.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1077 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 340 catcttcaccatggacatggcgaactg 366 ||||||||||||||||| ||||||||| Sbjct: 945 catcttcaccatggacacggcgaactg 919
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 340 catcttcaccatggacatggcgaactg 366 ||||||||||||||||| ||||||||| Sbjct: 99023 catcttcaccatggacacggcgaactg 98997
>dbj|AK104833.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-B05, full insert sequence Length = 1298 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 428 tcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 ||||||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 883 tcgatgaggccctggtcggacttgaagatcccctgcttggcgatgag 837 Score = 44.1 bits (22), Expect = 0.41 Identities = 58/70 (82%) Strand = Plus / Minus Query: 285 cggcgcagttctgccggatctcgccctgggtgccggtgagcaagtccatgttgctcatct 344 |||||||||| | ||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 1026 cggcgcagttgttgcggatctcgccggcgttgccggtgaggacgtccatctggctcatct 967 Query: 345 tcaccatgga 354 | |||||||| Sbjct: 966 tgaccatgga 957
>dbj|AK102307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B01, full insert sequence Length = 1487 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 428 tcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 ||||||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 1034 tcgatgaggccctggtcggacttgaagatcccctgcttggcgatgag 988
>dbj|AK060789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D09, full insert sequence Length = 1349 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 428 tcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 ||||||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 885 tcgatgaggccctggtcggacttgaagatcccctgcttggcgatgag 839
>gb|AY106495.1| Zea mays PCO063105 mRNA sequence Length = 1396 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 332 atgttgctcatcttcaccatggacatggcgaactgcctgaagaaggc 378 ||||||| ||||||||||||||| || ||||||| |||||||||| Sbjct: 1067 atgttgcccatcttcaccatggagtcggagaactgcttgaagaaggc 1021
>tpe|BN000588.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx59 gene for class III peroxidase 59 precursor, exons 1-3 Length = 1290 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 428 tcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 ||||||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 1076 tcgatgaggccctggtcggacttgaagatcccctgcttggcgatgag 1030
>tpe|BN000552.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx23 gene for class III peroxidase 23 precursor, exons 1-2 Length = 1459 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 340 catcttcaccatggacatggcgaactg 366 ||||||||||||||||| ||||||||| Sbjct: 1327 catcttcaccatggacacggcgaactg 1301
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 428 tcgatgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 ||||||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 66617 tcgatgaggccctggtcggacttgaagatcccctgcttggcgatgag 66663 Score = 44.1 bits (22), Expect = 0.41 Identities = 58/70 (82%) Strand = Plus / Plus Query: 285 cggcgcagttctgccggatctcgccctgggtgccggtgagcaagtccatgttgctcatct 344 |||||||||| | ||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 66474 cggcgcagttgttgcggatctcgccggcgttgccggtgaggacgtccatctggctcatct 66533 Query: 345 tcaccatgga 354 | |||||||| Sbjct: 66534 tgaccatgga 66543 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 accatggacatggcgaactgcctgaagaa 375 ||||||||| ||||||||||| ||||||| Sbjct: 81341 accatggacttggcgaactgcgtgaagaa 81369
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 320 gtgagcaagtccatgttgctcatcttcaccatgg 353 ||||||| ||| ||||||| |||||||||||||| Sbjct: 107534 gtgagcacgtcgatgttgcccatcttcaccatgg 107501 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Minus Query: 296 tgccggatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatgg 353 |||||||||||||| | | ||||||||||| ||| | ||||| |||||| ||||||| Sbjct: 95474 tgccggatctcgccgggtgggccggtgagcacgtcgaggttgcccatcttgaccatgg 95417
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagca 326 ||||||||||||| |||||||||||| Sbjct: 42111 gatctcgccctggctgccggtgagca 42086
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagca 326 ||||||||||||| |||||||||||| Sbjct: 24439438 gatctcgccctggctgccggtgagca 24439413 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 320 gtgagcaagtccatgttgctcatcttcaccatgg 353 ||||||| ||| ||||||| |||||||||||||| Sbjct: 2014657 gtgagcacgtcgatgttgcccatcttcaccatgg 2014624 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Minus Query: 296 tgccggatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatgg 353 |||||||||||||| | | ||||||||||| ||| | ||||| |||||| ||||||| Sbjct: 2002597 tgccggatctcgccgggtgggccggtgagcacgtcgaggttgcccatcttgaccatgg 2002540
>dbj|D14997.1|RICPEROX Oryza sativa (japonica cultivar-group) mRNA for peroxidase, complete cds Length = 1325 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagca 326 ||||||||||||| |||||||||||| Sbjct: 1019 gatctcgccctggctgccggtgagca 994
>dbj|AK104950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-A02, full insert sequence Length = 1347 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagca 326 ||||||||||||| |||||||||||| Sbjct: 1048 gatctcgccctggctgccggtgagca 1023
>dbj|AK066855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082J20, full insert sequence Length = 1348 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagca 326 ||||||||||||| |||||||||||| Sbjct: 1049 gatctcgccctggctgccggtgagca 1024
>tpe|BN000603.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx74 gene for class III peroxidase 74 precursor, exons 1-4 Length = 1311 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagca 326 ||||||||||||| |||||||||||| Sbjct: 1284 gatctcgccctggctgccggtgagca 1259
>tpe|BN000599.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx70 gene for class III peroxidase 70 precursor, exons 1-2 Length = 1356 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 320 gtgagcaagtccatgttgctcatcttcaccatgg 353 ||||||| ||| ||||||| |||||||||||||| Sbjct: 1301 gtgagcacgtcgatgttgcccatcttcaccatgg 1268
>tpe|BN000598.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx69 gene for class III peroxidase 69 precursor, exons 1-2 Length = 1108 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Minus Query: 296 tgccggatctcgccctgggtgccggtgagcaagtccatgttgctcatcttcaccatgg 353 |||||||||||||| | | ||||||||||| ||| | ||||| |||||| ||||||| Sbjct: 1086 tgccggatctcgccgggtgggccggtgagcacgtcgaggttgcccatcttgaccatgg 1029
>ref|XM_462938.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1115 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 ccggatctcgccctgggtgccggtgagca 326 ||||||||| |||||| |||||||||||| Sbjct: 1091 ccggatctccccctggctgccggtgagca 1063
>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11 map R606A, complete sequence Length = 163580 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 ccggatctcgccctgggtgccggtgagca 326 ||||||||| |||||| |||||||||||| Sbjct: 55180 ccggatctccccctggctgccggtgagca 55208
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 ccggatctcgccctgggtgccggtgagca 326 ||||||||| |||||| |||||||||||| Sbjct: 20076833 ccggatctccccctggctgccggtgagca 20076805 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 12591358 gatctcgccctgcgtgccggtgagc 12591334
>emb|AM055592.1| Tomato aspermy virus CP gene for coat protein, genomic RNA Length = 657 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 cgacgactggacaaaacgact 160 ||||||||||||||||||||| Sbjct: 376 cgacgactggacaaaacgact 396
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 340 catcttcaccatggacatggcgaactgcctgaagaag 376 |||||| ||||||||| ||||||||||| ||||||| Sbjct: 67559 catcttgaccatggacttggcgaactgcgcgaagaag 67523
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 85631 gatctcgccctgcgtgccggtgagc 85655
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 ccggatctcgccctgggtgccggtgagca 326 ||||||||| |||||| |||||||||||| Sbjct: 20069861 ccggatctccccctggctgccggtgagca 20069833 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 12588121 gatctcgccctgcgtgccggtgagc 12588097
>dbj|AK122030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112F15, full insert sequence Length = 1405 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 ccggatctcgccctgggtgccggtgagca 326 ||||||||| |||||| |||||||||||| Sbjct: 1156 ccggatctccccctggctgccggtgagca 1128
>dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F11, full insert sequence Length = 1351 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 340 catcttcaccatggacatggcgaactgcctgaagaag 376 |||||| ||||||||| ||||||||||| ||||||| Sbjct: 1048 catcttgaccatggacttggcgaactgcgcgaagaag 1012
>dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D07, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
>dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H05, full insert sequence Length = 1265 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
>dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G09, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
>dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G05, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
>dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C02, full insert sequence Length = 1252 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
>dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B03, full insert sequence Length = 1215 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
>dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D07, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
>dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C06, full insert sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
>dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C01, full insert sequence Length = 1264 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1024 gatctcgccctgcgtgccggtgagc 1000
>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full insert sequence Length = 1271 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 297 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 345 |||||||||| ||| ||| ||||||||||| || ||||||| |||||| Sbjct: 1025 gccggatctccccccgggcgccggtgagcacgttgatgttgcccatctt 977
>dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094O18, full insert sequence Length = 1263 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 1023 gatctcgccctgcgtgccggtgagc 999
>dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A04, full insert sequence Length = 1031 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 791 gatctcgccctgcgtgccggtgagc 767
>tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx54 gene for class III peroxidase 54 precursor, exon 1 Length = 1038 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 340 catcttcaccatggacatggcgaactgcctgaagaag 376 |||||| ||||||||| ||||||||||| ||||||| Sbjct: 966 catcttgaccatggacttggcgaactgcgcgaagaag 930
>tpe|BN000578.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx49 gene for class III peroxidase 49 precursor, exons 1-4 Length = 5136 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 ccggatctcgccctgggtgccggtgagca 326 ||||||||| |||||| |||||||||||| Sbjct: 5112 ccggatctccccctggctgccggtgagca 5084
>tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx41 gene for class III peroxidase 41 precursor, exons 1-4 Length = 5018 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 gatctcgccctgggtgccggtgagc 325 |||||||||||| |||||||||||| Sbjct: 4991 gatctcgccctgcgtgccggtgagc 4967
>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04, complete sequence Length = 140890 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 340 catcttcaccatggacatggcgaactgcctgaagaag 376 |||||| ||||||||| ||||||||||| ||||||| Sbjct: 9733 catcttgaccatggacttggcgaactgcgcgaagaag 9697
>gb|AC114641.6| Mus musculus chromosome 3, clone RP24-126N3, complete sequence Length = 86553 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gatatactctgagcacccac 116 |||||||||||||||||||| Sbjct: 69292 gatatactctgagcacccac 69311
>gb|AC165974.4| Mus musculus BAC clone RP23-16J4 from chromosome 6, complete sequence Length = 237816 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 atatactctgagcacccact 117 |||||||||||||||||||| Sbjct: 225409 atatactctgagcacccact 225428
>gb|AC152565.1| Ornithorhynchus anatinus chromosome UNK clone OABb-145A1, complete sequence Length = 135384 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cactcatcattttattacaa 133 |||||||||||||||||||| Sbjct: 80644 cactcatcattttattacaa 80663
>gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosome 10, complete sequence Length = 155876 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 aagaaggcagactggctgag 390 |||||||||||||||||||| Sbjct: 111036 aagaaggcagactggctgag 111017
>gb|AC110256.12| Mus musculus chromosome 6, clone RP23-274K3, complete sequence Length = 240425 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 atatactctgagcacccact 117 |||||||||||||||||||| Sbjct: 64294 atatactctgagcacccact 64313
>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence Length = 139792 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 ggagagagtacaaggtttaa 61 |||||||||||||||||||| Sbjct: 126474 ggagagagtacaaggtttaa 126493
>gb|AF485268.1| Gossypium hirsutum bacterial-induced class III peroxidase (pod6) mRNA, complete cds Length = 1389 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 atgttgctcatcttcaccatggac 355 ||||| |||||||||||||||||| Sbjct: 1015 atgttactcatcttcaccatggac 992
>emb|Z84473.1|IBPN1 I.batatas mRNa for neutral peroxidase Length = 1282 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gttgctcatcttcaccatgg 353 |||||||||||||||||||| Sbjct: 1026 gttgctcatcttcaccatgg 1007
>emb|Z84472.1|IBPA1 I.batatas mRNA for anionic peroxidase Length = 1380 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gttgctcatcttcaccatgg 353 |||||||||||||||||||| Sbjct: 1026 gttgctcatcttcaccatgg 1007
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ctcgataccctcgacacgcc 275 |||||||||||||||||||| Sbjct: 117972 ctcgataccctcgacacgcc 117953
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ctcgataccctcgacacgcc 275 |||||||||||||||||||| Sbjct: 121932 ctcgataccctcgacacgcc 121913
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ctcgataccctcgacacgcc 275 |||||||||||||||||||| Sbjct: 182963 ctcgataccctcgacacgcc 182944
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 tcggggtggtcgatgagggcctgg 442 ||||||||||||| |||||||||| Sbjct: 265388 tcggggtggtcgacgagggcctgg 265411
>emb|AJ309544.2|MMU309544 Mus musculus mRNA for TTF-I interacting protein 5 (TIP5 gene) Length = 5553 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 aagaaggcagactggctgag 390 |||||||||||||||||||| Sbjct: 3650 aagaaggcagactggctgag 3631
>gb|AC162392.9| Mus musculus 6 BAC RP23-197G11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195176 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aacttaacaacacataatta 20 |||||||||||||||||||| Sbjct: 152043 aacttaacaacacataatta 152024
>emb|BX547996.10| Zebrafish DNA sequence from clone CH211-212H16 in linkage group 1, complete sequence Length = 213398 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 taattaatggattctaagtt 34 |||||||||||||||||||| Sbjct: 106880 taattaatggattctaagtt 106861
>gb|AC116733.19| Mus musculus chromosome 3, clone RP23-349K2, complete sequence Length = 209244 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gatatactctgagcacccac 116 |||||||||||||||||||| Sbjct: 186847 gatatactctgagcacccac 186828
>gb|BC078632.1| Mus musculus bromodomain adjacent to zinc finger domain, 2A, mRNA (cDNA clone IMAGE:4193325) Length = 4851 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 aagaaggcagactggctgag 390 |||||||||||||||||||| Sbjct: 377 aagaaggcagactggctgag 358
>gb|AC025030.14|AC025030 Homo sapiens 12 BAC RP11-46I1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170921 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 aatggagagagtacaaggtt 58 |||||||||||||||||||| Sbjct: 13940 aatggagagagtacaaggtt 13959
>gb|AF109123.1|AF109123 Ipomoea batatas anionic peroxidase Swpa3 (swpa3) mRNA, complete cds Length = 1310 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gttgctcatcttcaccatgg 353 |||||||||||||||||||| Sbjct: 1015 gttgctcatcttcaccatgg 996
>dbj|AK122243.1| Mus musculus mRNA for mKIAA0314 protein Length = 5210 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 aagaaggcagactggctgag 390 |||||||||||||||||||| Sbjct: 762 aagaaggcagactggctgag 743
>ref|NM_054078.1| Mus musculus bromodomain adjacent to zinc finger domain, 2A (Baz2a), mRNA Length = 5553 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 aagaaggcagactggctgag 390 |||||||||||||||||||| Sbjct: 3650 aagaaggcagactggctgag 3631
>emb|AL691450.15| Mouse DNA sequence from clone RP23-20F9 on chromosome 2, complete sequence Length = 181372 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tgaagaatggagagagtaca 53 |||||||||||||||||||| Sbjct: 131440 tgaagaatggagagagtaca 131421
>gb|AF019743.1|AF019743 Oryza sativa cationic peroxidase (OsCPX1) mRNA, complete cds Length = 1333 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 431 atgagggcctggtcggacttgaacaatccctgcctgacgatgag 474 |||||| |||||||||||||||| | |||||| || ||||||| Sbjct: 869 atgaggccctggtcggacttgaagatcccctgcttggcgatgag 826
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 atgttgctcatcttcaccat 351 |||||||||||||||||||| Sbjct: 110158 atgttgctcatcttcaccat 110177
>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete sequence Length = 208805 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctctgagcacccactcatca 122 |||||||||||||||||||| Sbjct: 76487 ctctgagcacccactcatca 76468
>emb|AL928737.8| Mouse DNA sequence from clone RP23-382O14 on chromosome 2, complete sequence Length = 237175 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 attaatggattctaagttgaagaa 40 |||||||||||||| ||||||||| Sbjct: 156091 attaatggattctaggttgaagaa 156114
>gb|M19726.1|RATNASPEC Rat noerythroid alpha-spectrin mRNA, 3' end Length = 1676 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 agaaggcagactggctgagc 391 |||||||||||||||||||| Sbjct: 118 agaaggcagactggctgagc 137 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,304,689 Number of Sequences: 3902068 Number of extensions: 3304689 Number of successful extensions: 63684 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 63114 Number of HSP's gapped (non-prelim): 568 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
