Clone Name | rbart20c12 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_477068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 280 bits (141), Expect = 4e-72 Identities = 267/309 (86%) Strand = Plus / Minus Query: 200 gttcttcccggggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctg 259 ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1492 gttcttccccgggccgccatagtagaagtaggtgccccagtcgccattgttgccgttctg 1433 Query: 260 cacgtcgtagcagttggactgctcggtgaaggacccgatccccctcggcgccttgaggtt 319 || |||||||| ||||||||||||||| ||| || | |||| | || ||||| || | Sbjct: 1432 aacatcgtagcaattggactgctcggtgtaggtgcccacccccttgggggccttcagctg 1373 Query: 320 gttggacgagtccaccacctggatattcttgaagtagctcgacttgctgaacccctcctc 379 |||| ||||||||||||||| |||||||||||||||| ||||| |||||| ||||| Sbjct: 1372 gttgctgctgtccaccacctggatgttcttgaagtagctcgccttgccgaacccttcctc 1313 Query: 380 cgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcac 439 |||||| | ||||| ||||||||||| |||||||| ||||||| ||||||| |||||| Sbjct: 1312 cgggaaccgcccgctccccatctgcgtcgacgtgtgcgtgccgtcgggctccgagttcac 1253 Query: 440 cacctcgccgccccactcgatcatcgacgcgctgtccgccaggtacgagaagaggaagga 499 |||||| ||||||||||||| ||||||||| ||||| | ||||| |||||||||||||| Sbjct: 1252 cacctccccgccccactcgaccatcgacgcactgtcgacgaggtaggagaagaggaagga 1193 Query: 500 cggccagta 508 ||||||||| Sbjct: 1192 cggccagta 1184
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 280 bits (141), Expect = 4e-72 Identities = 267/309 (86%) Strand = Plus / Minus Query: 200 gttcttcccggggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctg 259 ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5717097 gttcttccccgggccgccatagtagaagtaggtgccccagtcgccattgttgccgttctg 5717038 Query: 260 cacgtcgtagcagttggactgctcggtgaaggacccgatccccctcggcgccttgaggtt 319 || |||||||| ||||||||||||||| ||| || | |||| | || ||||| || | Sbjct: 5717037 aacatcgtagcaattggactgctcggtgtaggtgcccacccccttgggggccttcagctg 5716978 Query: 320 gttggacgagtccaccacctggatattcttgaagtagctcgacttgctgaacccctcctc 379 |||| ||||||||||||||| |||||||||||||||| ||||| |||||| ||||| Sbjct: 5716977 gttgctgctgtccaccacctggatgttcttgaagtagctcgccttgccgaacccttcctc 5716918 Query: 380 cgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcac 439 |||||| | ||||| ||||||||||| |||||||| ||||||| ||||||| |||||| Sbjct: 5716917 cgggaaccgcccgctccccatctgcgtcgacgtgtgcgtgccgtcgggctccgagttcac 5716858 Query: 440 cacctcgccgccccactcgatcatcgacgcgctgtccgccaggtacgagaagaggaagga 499 |||||| ||||||||||||| ||||||||| ||||| | ||||| |||||||||||||| Sbjct: 5716857 cacctccccgccccactcgaccatcgacgcactgtcgacgaggtaggagaagaggaagga 5716798 Query: 500 cggccagta 508 ||||||||| Sbjct: 5716797 cggccagta 5716789 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 23128191 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 23128132 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 23128131 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 23128072 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 23128071 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 23128012 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 23128011 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 23127952 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 23127951 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 23127892 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 23127891 ggagaagaggaaggatggccagta 23127868
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 280 bits (141), Expect = 4e-72 Identities = 267/309 (86%) Strand = Plus / Minus Query: 200 gttcttcccggggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctg 259 ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 24125 gttcttccccgggccgccatagtagaagtaggtgccccagtcgccattgttgccgttctg 24066 Query: 260 cacgtcgtagcagttggactgctcggtgaaggacccgatccccctcggcgccttgaggtt 319 || |||||||| ||||||||||||||| ||| || | |||| | || ||||| || | Sbjct: 24065 aacatcgtagcaattggactgctcggtgtaggtgcccacccccttgggggccttcagctg 24006 Query: 320 gttggacgagtccaccacctggatattcttgaagtagctcgacttgctgaacccctcctc 379 |||| ||||||||||||||| |||||||||||||||| ||||| |||||| ||||| Sbjct: 24005 gttgctgctgtccaccacctggatgttcttgaagtagctcgccttgccgaacccttcctc 23946 Query: 380 cgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcac 439 |||||| | ||||| ||||||||||| |||||||| ||||||| ||||||| |||||| Sbjct: 23945 cgggaaccgcccgctccccatctgcgtcgacgtgtgcgtgccgtcgggctccgagttcac 23886 Query: 440 cacctcgccgccccactcgatcatcgacgcgctgtccgccaggtacgagaagaggaagga 499 |||||| ||||||||||||| ||||||||| ||||| | ||||| |||||||||||||| Sbjct: 23885 cacctccccgccccactcgaccatcgacgcactgtcgacgaggtaggagaagaggaagga 23826 Query: 500 cggccagta 508 ||||||||| Sbjct: 23825 cggccagta 23817
>dbj|AK103449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129H24, full insert sequence Length = 1811 Score = 280 bits (141), Expect = 4e-72 Identities = 267/309 (86%) Strand = Plus / Minus Query: 200 gttcttcccggggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctg 259 ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491 gttcttccccgggccgccatagtagaagtaggtgccccagtcgccattgttgccgttctg 1432 Query: 260 cacgtcgtagcagttggactgctcggtgaaggacccgatccccctcggcgccttgaggtt 319 || |||||||| ||||||||||||||| ||| || | |||| | || ||||| || | Sbjct: 1431 aacatcgtagcaattggactgctcggtgtaggtgcccacccccttgggggccttcagctg 1372 Query: 320 gttggacgagtccaccacctggatattcttgaagtagctcgacttgctgaacccctcctc 379 |||| ||||||||||||||| |||||||||||||||| ||||| |||||| ||||| Sbjct: 1371 gttgctgctgtccaccacctggatgttcttgaagtagctcgccttgccgaacccttcctc 1312 Query: 380 cgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcac 439 |||||| | ||||| ||||||||||| |||||||| ||||||| ||||||| |||||| Sbjct: 1311 cgggaaccgcccgctccccatctgcgtcgacgtgtgcgtgccgtcgggctccgagttcac 1252 Query: 440 cacctcgccgccccactcgatcatcgacgcgctgtccgccaggtacgagaagaggaagga 499 |||||| ||||||||||||| ||||||||| ||||| | ||||| |||||||||||||| Sbjct: 1251 cacctccccgccccactcgaccatcgacgcactgtcgacgaggtaggagaagaggaagga 1192 Query: 500 cggccagta 508 ||||||||| Sbjct: 1191 cggccagta 1183
>ref|XM_478799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1757 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 1372 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 1313 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 1312 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 1253 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 1252 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 1193 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 1192 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 1133 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 1132 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 1073 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 1072 ggagaagaggaaggatggccagta 1049
>ref|XM_507376.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA Length = 2418 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 1381 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 1322 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 1321 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 1262 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 1261 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 1202 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 1201 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 1142 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 1141 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 1082 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 1081 ggagaagaggaaggatggccagta 1058
>ref|XM_506420.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA Length = 1772 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 1514 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 1455 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 1454 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 1395 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 1394 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 1335 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 1334 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 1275 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 1274 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 1215 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 1214 ggagaagaggaaggatggccagta 1191
>dbj|AK121705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075B20, full insert sequence Length = 1786 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 1380 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 1321 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 1320 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 1261 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 1260 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 1201 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 1200 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 1141 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 1140 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 1081 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 1080 ggagaagaggaaggatggccagta 1057
>dbj|AK119637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F04, full insert sequence Length = 1765 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 1379 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 1320 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 1319 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 1260 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 1259 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 1200 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 1199 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 1140 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 1139 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 1080 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 1079 ggagaagaggaaggatggccagta 1056
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 72375 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 72316 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 72315 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 72256 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 72255 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 72196 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 72195 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 72136 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 72135 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 72076 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 72075 ggagaagaggaaggatggccagta 72052
>dbj|AK102732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106A21, full insert sequence Length = 2417 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 1380 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 1321 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 1320 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 1261 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 1260 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 1201 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 1200 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 1141 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 1140 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 1081 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 1080 ggagaagaggaaggatggccagta 1057
>dbj|AK065116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O09, full insert sequence Length = 1757 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 1372 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 1313 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 1312 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 1253 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 1252 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 1193 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 1192 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 1133 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 1132 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 1073 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 1072 ggagaagaggaaggatggccagta 1049
>dbj|AK061739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E10, full insert sequence Length = 1772 Score = 246 bits (124), Expect = 6e-62 Identities = 274/324 (84%) Strand = Plus / Minus Query: 185 ctatggacagttggggttcttcccggggcccccgtagtagaagtaggtgccccagtcgcc 244 |||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||| || Sbjct: 1514 ctatggacagtttgggtttttccctggccctccatagtagaagtatgtgccccagtcacc 1455 Query: 245 attgttgccgttctgcacgtcgtagcagttggactgctcggtgaaggacccgatccccct 304 ||||||||| |||||||| || ||||||||||| ||||| ||||| ||||| || || || Sbjct: 1454 attgttgccattctgcacatcatagcagttggattgctcagtgaatgacccaataccact 1395 Query: 305 cggcgccttgaggttgttggacgagtccaccacctggatattcttgaagtagctcgactt 364 || ||| | || ||||| || || |||||||| || || |||||||||||||| ||||| Sbjct: 1394 tggtgccctaagattgtttgatgaatccaccacttgtatgttcttgaagtagctggactt 1335 Query: 365 gctgaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtggctgccgtc 424 || || || ||||| ||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 1334 gccaaatccttcctcagggaagtggccactgcccatctgtgtggaggtgtggctgccatc 1275 Query: 425 cggctccgtgttcaccacctcgccgccccactcgatcatcgacgcgctgtccgccaggta 484 ||||||| |||||||||||| || |||||||| ||||| || || ||||| |||| ||| Sbjct: 1274 aggctccgagttcaccacctcaccaccccactctatcatggaggcactgtctgccaagta 1215 Query: 485 cgagaagaggaaggacggccagta 508 |||||||||||||| |||||||| Sbjct: 1214 ggagaagaggaaggatggccagta 1191
>ref|XM_470030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1934 Score = 230 bits (116), Expect = 4e-57 Identities = 251/296 (84%) Strand = Plus / Minus Query: 210 gggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctgcacgtcgtag 269 ||||| || ||||||||||| |||||||||||| ||||||| ||||| |||||||||||| Sbjct: 1458 gggcctccatagtagaagtatgtgccccagtcggcattgttaccgttttgcacgtcgtag 1399 Query: 270 cagttggactgctcggtgaaggacccgatccccctcggcgccttgaggttgttggacgag 329 ||||| || ||||| ||||| | || | |||| | || || || |||||||||| | Sbjct: 1398 cagttcgattgctcagtgaatgtgcccacccccttgggggctttcaggttgttggtgctg 1339 Query: 330 tccaccacctggatattcttgaagtagctcgacttgctgaacccctcctccgggaagtgg 389 ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1338 tccaccacctgtatgttcttgaagtagcttgacttgctgaacccttcctccgggaagtga 1279 Query: 390 ccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcaccacctcgccg 449 ||||||||||||||||| |||||||| ||| || ||| || ||| |||||||| ||| Sbjct: 1278 ccgctgcccatctgcgtcgacgtgtgcacgccatcgagctgcgagtttaccacctccccg 1219 Query: 450 ccccactcgatcatcgacgcgctgtccgccaggtacgagaagaggaaggacggcca 505 |||||||||||||||||||||||||| | ||||| ||||| |||||||| ||||| Sbjct: 1218 ccccactcgatcatcgacgcgctgtcgccaaggtaggagaataggaaggatggcca 1163
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 230 bits (116), Expect = 4e-57 Identities = 251/296 (84%) Strand = Plus / Minus Query: 210 gggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctgcacgtcgtag 269 ||||| || ||||||||||| |||||||||||| ||||||| ||||| |||||||||||| Sbjct: 33430758 gggcctccatagtagaagtatgtgccccagtcggcattgttaccgttttgcacgtcgtag 33430699 Query: 270 cagttggactgctcggtgaaggacccgatccccctcggcgccttgaggttgttggacgag 329 ||||| || ||||| ||||| | || | |||| | || || || |||||||||| | Sbjct: 33430698 cagttcgattgctcagtgaatgtgcccacccccttgggggctttcaggttgttggtgctg 33430639 Query: 330 tccaccacctggatattcttgaagtagctcgacttgctgaacccctcctccgggaagtgg 389 ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 33430638 tccaccacctgtatgttcttgaagtagcttgacttgctgaacccttcctccgggaagtga 33430579 Query: 390 ccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcaccacctcgccg 449 ||||||||||||||||| |||||||| ||| || ||| || ||| |||||||| ||| Sbjct: 33430578 ccgctgcccatctgcgtcgacgtgtgcacgccatcgagctgcgagtttaccacctccccg 33430519 Query: 450 ccccactcgatcatcgacgcgctgtccgccaggtacgagaagaggaaggacggcca 505 |||||||||||||||||||||||||| | ||||| ||||| |||||||| ||||| Sbjct: 33430518 ccccactcgatcatcgacgcgctgtcgccaaggtaggagaataggaaggatggcca 33430463
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 230 bits (116), Expect = 4e-57 Identities = 251/296 (84%) Strand = Plus / Plus Query: 210 gggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctgcacgtcgtag 269 ||||| || ||||||||||| |||||||||||| ||||||| ||||| |||||||||||| Sbjct: 67353 gggcctccatagtagaagtatgtgccccagtcggcattgttaccgttttgcacgtcgtag 67412 Query: 270 cagttggactgctcggtgaaggacccgatccccctcggcgccttgaggttgttggacgag 329 ||||| || ||||| ||||| | || | |||| | || || || |||||||||| | Sbjct: 67413 cagttcgattgctcagtgaatgtgcccacccccttgggggctttcaggttgttggtgctg 67472 Query: 330 tccaccacctggatattcttgaagtagctcgacttgctgaacccctcctccgggaagtgg 389 ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 67473 tccaccacctgtatgttcttgaagtagcttgacttgctgaacccttcctccgggaagtga 67532 Query: 390 ccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcaccacctcgccg 449 ||||||||||||||||| |||||||| ||| || ||| || ||| |||||||| ||| Sbjct: 67533 ccgctgcccatctgcgtcgacgtgtgcacgccatcgagctgcgagtttaccacctccccg 67592 Query: 450 ccccactcgatcatcgacgcgctgtccgccaggtacgagaagaggaaggacggcca 505 |||||||||||||||||||||||||| | ||||| ||||| |||||||| ||||| Sbjct: 67593 ccccactcgatcatcgacgcgctgtcgccaaggtaggagaataggaaggatggcca 67648
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 230 bits (116), Expect = 4e-57 Identities = 251/296 (84%) Strand = Plus / Minus Query: 210 gggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctgcacgtcgtag 269 ||||| || ||||||||||| |||||||||||| ||||||| ||||| |||||||||||| Sbjct: 33521268 gggcctccatagtagaagtatgtgccccagtcggcattgttaccgttttgcacgtcgtag 33521209 Query: 270 cagttggactgctcggtgaaggacccgatccccctcggcgccttgaggttgttggacgag 329 ||||| || ||||| ||||| | || | |||| | || || || |||||||||| | Sbjct: 33521208 cagttcgattgctcagtgaatgtgcccacccccttgggggctttcaggttgttggtgctg 33521149 Query: 330 tccaccacctggatattcttgaagtagctcgacttgctgaacccctcctccgggaagtgg 389 ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 33521148 tccaccacctgtatgttcttgaagtagcttgacttgctgaacccttcctccgggaagtga 33521089 Query: 390 ccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcaccacctcgccg 449 ||||||||||||||||| |||||||| ||| || ||| || ||| |||||||| ||| Sbjct: 33521088 ccgctgcccatctgcgtcgacgtgtgcacgccatcgagctgcgagtttaccacctccccg 33521029 Query: 450 ccccactcgatcatcgacgcgctgtccgccaggtacgagaagaggaaggacggcca 505 |||||||||||||||||||||||||| | ||||| ||||| |||||||| ||||| Sbjct: 33521028 ccccactcgatcatcgacgcgctgtcgccaaggtaggagaataggaaggatggcca 33520973
>gb|AY111829.1| Zea mays CL2834_1 mRNA sequence Length = 520 Score = 113 bits (57), Expect = 6e-22 Identities = 176/214 (82%), Gaps = 5/214 (2%) Strand = Plus / Plus Query: 205 tcccggggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctgcacgt 264 ||||||| || ||||||||||||||||||||||||||| | | ||||| ||||||||| Sbjct: 240 tcccgggcccgccgtagtagaagtaggtgccccagtcggcgtg--tgccgctctgcacgt 297 Query: 265 cgtagcagttggactgctcggtgaa--ggacccgatc-cccctcggcgccttgaggttgt 321 |||||||| |||||||||| ||||| || || | | ||||| |||||| |||||||| Sbjct: 298 cgtagcagctggactgctccgtgaaggggcccaggccgcccctgggcgccccgaggttgt 357 Query: 322 tggacgagtccaccacctggatattcttgaagtagctcgacttgctgaacccctcctccg 381 || |||||||||||| | ||||||||||||| | ||| |||||| ||||| | Sbjct: 358 tgctgctgtccaccacctgcannnnnttgaagtagctcgccctgccgaacccttcctcgg 417 Query: 382 ggaagtggccgctgcccatctgcgtggacgtgtg 415 ||||||| ||||||||||||||||| |||||||| Sbjct: 418 ggaagtgcccgctgcccatctgcgtcgacgtgtg 451 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 cgacgcgctgtccgccaggta 484 ||||||||||||||||||||| Sbjct: 500 cgacgcgctgtccgccaggta 520
>ref|NM_193355.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 200 gttcttcccggggcccccgtagtagaagtaggtgccccag 239 |||||| |||||||| ||||||||||||||| |||||||| Sbjct: 1425 gttcttgccggggccgccgtagtagaagtagttgccccag 1386 Score = 44.1 bits (22), Expect = 0.44 Identities = 60/72 (83%), Gaps = 3/72 (4%) Strand = Plus / Minus Query: 383 gaagtggccgctgcccatctgcgtggacgtgtg---gctgccgtccggctccgtgttcac 439 |||||| ||||| ||||||||||| | |||||| || |||||| | | ||||||||| Sbjct: 1239 gaagtgcccgctccccatctgcgtcgccgtgtgcgcgccgccgtcggccctcgtgttcac 1180 Query: 440 cacctcgccgcc 451 |||||||||||| Sbjct: 1179 cacctcgccgcc 1168
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 200 gttcttcccggggcccccgtagtagaagtaggtgccccag 239 |||||| |||||||| ||||||||||||||| |||||||| Sbjct: 20334593 gttcttgccggggccgccgtagtagaagtagttgccccag 20334632 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 206 cccggggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctgcacgtc 265 ||||||||| ||||||||||||||| |||||||| ||| |||| |||| ||| | ||| Sbjct: 3632833 cccggggccgccgtagtagaagtagttgccccaggcgcggttgtagccgccctggatgtc 3632892 Query: 266 gtagcag 272 ||||||| Sbjct: 3632893 gtagcag 3632899 Score = 44.1 bits (22), Expect = 0.44 Identities = 60/72 (83%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 383 gaagtggccgctgcccatctgcgtggacgtgtg---gctgccgtccggctccgtgttcac 439 |||||| ||||| ||||||||||| | |||||| || |||||| | | ||||||||| Sbjct: 20334779 gaagtgcccgctccccatctgcgtcgccgtgtgcgcgccgccgtcggccctcgtgttcac 20334838 Query: 440 cacctcgccgcc 451 |||||||||||| Sbjct: 20334839 cacctcgccgcc 20334850 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 381 gggaagtggccgctgcccatctgcgt 406 |||||||||||||| ||||||||||| Sbjct: 3633008 gggaagtggccgctccccatctgcgt 3633033 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 cgtgttcaccacctcgccgcc 451 ||||||||||||||||||||| Sbjct: 3633058 cgtgttcaccacctcgccgcc 3633078
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 200 gttcttcccggggcccccgtagtagaagtaggtgccccag 239 |||||| |||||||| ||||||||||||||| |||||||| Sbjct: 100626 gttcttgccggggccgccgtagtagaagtagttgccccag 100665 Score = 44.1 bits (22), Expect = 0.44 Identities = 60/72 (83%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 383 gaagtggccgctgcccatctgcgtggacgtgtg---gctgccgtccggctccgtgttcac 439 |||||| ||||| ||||||||||| | |||||| || |||||| | | ||||||||| Sbjct: 100812 gaagtgcccgctccccatctgcgtcgccgtgtgcgcgccgccgtcggccctcgtgttcac 100871 Query: 440 cacctcgccgcc 451 |||||||||||| Sbjct: 100872 cacctcgccgcc 100883
>ref|XM_550273.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1943 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 206 cccggggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctgcacgtc 265 ||||||||| ||||||||||||||| |||||||| ||| |||| |||| ||| | ||| Sbjct: 1400 cccggggccgccgtagtagaagtagttgccccaggcgcggttgtagccgccctggatgtc 1341 Query: 266 gtagcag 272 ||||||| Sbjct: 1340 gtagcag 1334 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 381 gggaagtggccgctgcccatctgcgt 406 |||||||||||||| ||||||||||| Sbjct: 1225 gggaagtggccgctccccatctgcgt 1200 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 cgtgttcaccacctcgccgcc 451 ||||||||||||||||||||| Sbjct: 1175 cgtgttcaccacctcgccgcc 1155
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 206 cccggggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctgcacgtc 265 ||||||||| ||||||||||||||| |||||||| ||| |||| |||| ||| | ||| Sbjct: 41313 cccggggccgccgtagtagaagtagttgccccaggcgcggttgtagccgccctggatgtc 41372 Query: 266 gtagcag 272 ||||||| Sbjct: 41373 gtagcag 41379 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 381 gggaagtggccgctgcccatctgcgt 406 |||||||||||||| ||||||||||| Sbjct: 41488 gggaagtggccgctccccatctgcgt 41513 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 cgtgttcaccacctcgccgcc 451 ||||||||||||||||||||| Sbjct: 41538 cgtgttcaccacctcgccgcc 41558
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 207 ccggggcccccgtagtagaagtaggtgccccagt 240 |||||||| ||||||||||||||| ||||||||| Sbjct: 15673516 ccggggccgccgtagtagaagtagctgccccagt 15673549 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 cgtgttcaccacctcgccgcc 451 ||||||||||||||||||||| Sbjct: 15673740 cgtgttcaccacctcgccgcc 15673760 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 368 gaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtg 415 ||||||||| | |||||||| ||||| ||||||||||| | |||||| Sbjct: 15673677 gaacccctcgccggggaagtgaccgctccccatctgcgtcgccgtgtg 15673724
>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021H10 Length = 142659 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 207 ccggggcccccgtagtagaagtaggtgccccagt 240 |||||||| ||||||||||||||| ||||||||| Sbjct: 9154 ccggggccgccgtagtagaagtagctgccccagt 9187 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 cgtgttcaccacctcgccgcc 451 ||||||||||||||||||||| Sbjct: 9378 cgtgttcaccacctcgccgcc 9398 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 368 gaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtg 415 ||||||||| | |||||||| ||||| ||||||||||| | |||||| Sbjct: 9315 gaacccctcgccggggaagtgaccgctccccatctgcgtcgccgtgtg 9362
>dbj|AK106837.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-G08, full insert sequence Length = 1941 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 207 ccggggcccccgtagtagaagtaggtgccccagtcgccattgttgccgttctgcacgtcg 266 |||||||| ||||||||||||||| |||||||| ||| |||| |||| ||| | |||| Sbjct: 1398 ccggggccgccgtagtagaagtagttgccccaggcgcggttgtagccgccctggatgtcg 1339 Query: 267 tagcag 272 |||||| Sbjct: 1338 tagcag 1333 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 381 gggaagtggccgctgcccatctgcgt 406 |||||||||||||| ||||||||||| Sbjct: 1224 gggaagtggccgctccccatctgcgt 1199 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 cgtgttcaccacctcgccgcc 451 ||||||||||||||||||||| Sbjct: 1174 cgtgttcaccacctcgccgcc 1154
>dbj|AK104980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D09, full insert sequence Length = 1770 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 207 ccggggcccccgtagtagaagtaggtgccccagt 240 |||||||| ||||||||||||||| ||||||||| Sbjct: 1477 ccggggccgccgtagtagaagtagctgccccagt 1444 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 cgtgttcaccacctcgccgcc 451 ||||||||||||||||||||| Sbjct: 1253 cgtgttcaccacctcgccgcc 1233 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 368 gaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtg 415 ||||||||| | |||||||| ||||| ||||||||||| | |||||| Sbjct: 1316 gaacccctcgccggggaagtgaccgctccccatctgcgtcgccgtgtg 1269
>dbj|AK073288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028L24, full insert sequence Length = 1849 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 207 ccggggcccccgtagtagaagtaggtgccccagt 240 |||||||| ||||||||||||||| ||||||||| Sbjct: 1584 ccggggccgccgtagtagaagtagctgccccagt 1551 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 cgtgttcaccacctcgccgcc 451 ||||||||||||||||||||| Sbjct: 1360 cgtgttcaccacctcgccgcc 1340 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 368 gaacccctcctccgggaagtggccgctgcccatctgcgtggacgtgtg 415 ||||||||| | |||||||| ||||| ||||||||||| | |||||| Sbjct: 1423 gaacccctcgccggggaagtgaccgctccccatctgcgtcgccgtgtg 1376
>ref|XM_476052.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1323 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 381 gggaagtggccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcacc 440 |||||| ||||||||||||||||||| | |||||| || |||| |||||||||| Sbjct: 1157 gggaagcggccgctgcccatctgcgtcggcgtgtgcgaccccgacggccgcgtgttcacc 1098 Query: 441 acctcgccgcc 451 ||||||||||| Sbjct: 1097 acctcgccgcc 1087
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 381 gggaagtggccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcacc 440 |||||| ||||||||||||||||||| | |||||| || |||| |||||||||| Sbjct: 7781 gggaagcggccgctgcccatctgcgtcggcgtgtgcgaccccgacggccgcgtgttcacc 7840 Query: 441 acctcgccgcc 451 ||||||||||| Sbjct: 7841 acctcgccgcc 7851
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 381 gggaagtggccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcacc 440 |||||| ||||||||||||||||||| | |||||| || |||| |||||||||| Sbjct: 95996 gggaagcggccgctgcccatctgcgtcggcgtgtgcgaccccgacggccgcgtgttcacc 96055 Query: 441 acctcgccgcc 451 ||||||||||| Sbjct: 96056 acctcgccgcc 96066
>gb|AC148289.2| Medicago truncatula chromosome 7 BAC clone mth2-36p20, complete sequence Length = 114452 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 gaaaaagaagagagagaggtgtg 87 ||||||||||||||||||||||| Sbjct: 61619 gaaaaagaagagagagaggtgtg 61641
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 381 gggaagtggccgctgcccatctgcgtggacgtgtggctgccgtccggctccgtgttcacc 440 |||||| ||||||||||||||||||| | |||||| || |||| |||||||||| Sbjct: 4121302 gggaagcggccgctgcccatctgcgtcggcgtgtgcgaccccgacggccgcgtgttcacc 4121361 Query: 441 acctcgccgcc 451 ||||||||||| Sbjct: 4121362 acctcgccgcc 4121372
>gb|AY147840.1| Polaskia chichipe microsatellite Pchi5 sequence Length = 666 Score = 44.1 bits (22), Expect = 0.44 Identities = 49/58 (84%) Strand = Plus / Plus Query: 234 ccccagtcgccattgttgccgttctgcacgtcgtagcagttggactgctcggtgaagg 291 |||||||| || ||||||||| || || || ||||||||||| ||||||||||||| Sbjct: 428 ccccagtctccgttgttgccgagttgaacatcatagcagttggattgctcggtgaagg 485
>gb|AY108462.1| Zea mays PCO092830 mRNA sequence Length = 600 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 432 gtgttcaccacctcgccgccccactc 457 |||| ||||||||||||||||||||| Sbjct: 35 gtgtccaccacctcgccgccccactc 10
>gb|AC154548.3| Mus musculus BAC clone RP23-437N23 from chromosome 13, complete sequence Length = 173722 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 ttttagttcatcacatttctt 183 ||||||||||||||||||||| Sbjct: 73541 ttttagttcatcacatttctt 73561
>gb|U34207.1|PPU34207 Photobacterium phosphoreum methylenetetrahydrofolate dehydrogenase-cyclohydrolase gene, complete cds Length = 970 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 catggatggcattttagttca 172 ||||||||||||||||||||| Sbjct: 306 catggatggcattttagttca 326
>gb|AC127321.4| Mus musculus BAC clone RP23-231A8 from chromosome 8, complete sequence Length = 220673 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 attttagttcatcacatttct 182 ||||||||||||||||||||| Sbjct: 102916 attttagttcatcacatttct 102896
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 atggaaaaagaagagagagag 82 ||||||||||||||||||||| Sbjct: 24214687 atggaaaaagaagagagagag 24214667
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2055_H10 Length = 119290 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 atggaaaaagaagagagagag 82 ||||||||||||||||||||| Sbjct: 15075 atggaaaaagaagagagagag 15055
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 atggaaaaagaagagagagag 82 ||||||||||||||||||||| Sbjct: 173428 atggaaaaagaagagagagag 173408
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 gaagtggccgctgcccatctg 403 ||||||||||||||||||||| Sbjct: 5698815 gaagtggccgctgcccatctg 5698835
>gb|CP000004.1| Gluconobacter oxydans 621H plasmid pGOX1, complete sequence Length = 163186 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 cttgctgaacccctcctccgg 382 ||||||||||||||||||||| Sbjct: 27170 cttgctgaacccctcctccgg 27190
>ref|XM_483841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1495 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 432 gtgttcaccacctcgccgccccactcga 459 ||||| || ||||||||||||||||||| Sbjct: 1190 gtgttgacgacctcgccgccccactcga 1163
>gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, complete sequence Length = 220003 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ggaaaaagaagagagagagg 83 |||||||||||||||||||| Sbjct: 82457 ggaaaaagaagagagagagg 82438
>ref|NM_146691.1| Mus musculus olfactory receptor 1467 (Olfr1467), mRNA Length = 927 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ttcatcacatttcttgctat 188 |||||||||||||||||||| Sbjct: 79 ttcatcacatttcttgctat 98
>gb|AC119857.10| Mus musculus chromosome 3, clone RP23-257A18, complete sequence Length = 152106 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aaaaagaagagagagaggtg 85 |||||||||||||||||||| Sbjct: 66666 aaaaagaagagagagaggtg 66647
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09, complete sequence Length = 168192 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tggaaaaagaagagagagaggtgt 86 |||||||| ||||||||||||||| Sbjct: 123139 tggaaaaaaaagagagagaggtgt 123162
>gb|AC102217.9| Mus musculus chromosome 1, clone RP24-160A23, complete sequence Length = 214578 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ggaaaaagaagagagagagg 83 |||||||||||||||||||| Sbjct: 56962 ggaaaaagaagagagagagg 56943
>gb|AY318686.1| Mus musculus olfactory receptor Olfr1467 (Olfr1467) gene, complete cds Length = 927 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ttcatcacatttcttgctat 188 |||||||||||||||||||| Sbjct: 79 ttcatcacatttcttgctat 98
>gb|AC131758.3| Mus musculus BAC clone RP24-211E5 from chromosome 19, complete sequence Length = 206288 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttcatcacatttcttgctat 188 |||||||||||||||||||| Sbjct: 56354 ttcatcacatttcttgctat 56335
>ref|XM_807457.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053505949.30) partial mRNA Length = 2388 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 gtacgagaagaggaaggacg 501 |||||||||||||||||||| Sbjct: 1341 gtacgagaagaggaaggacg 1360
>gb|AC144725.16| Medicago truncatula clone mth2-7m17, complete sequence Length = 130213 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 caaaacttgaaaccaaaaac 47 |||||||||||||||||||| Sbjct: 16171 caaaacttgaaaccaaaaac 16152
>emb|AL118509.9|HSJ770C23 Human DNA sequence from clone RP4-770C23 on chromosome 20 Contains part of the C20orf23 gene for a novel protein similar to KIF1 type and other kinesin-like proteins, complete sequence Length = 81487 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gaaaaagaagagagagaggt 84 |||||||||||||||||||| Sbjct: 22682 gaaaaagaagagagagaggt 22701
>emb|BX640916.1|HSM807056 Homo sapiens mRNA; cDNA DKFZp667P1015 (from clone DKFZp667P1015) Length = 2040 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ggaaaaagaagagagagagg 83 |||||||||||||||||||| Sbjct: 1112 ggaaaaagaagagagagagg 1131
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tttagttcatcacatttctt 183 |||||||||||||||||||| Sbjct: 54352 tttagttcatcacatttctt 54333
>gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193809 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 ctcctccgggaagtggccgc 393 |||||||||||||||||||| Sbjct: 61590 ctcctccgggaagtggccgc 61609
>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9, complete sequence Length = 137898 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gaagagagagaggtgtgaac 90 |||||||||||||||||||| Sbjct: 51949 gaagagagagaggtgtgaac 51930
>dbj|AK093175.1| Homo sapiens cDNA FLJ35856 fis, clone TESTI2007163, weakly similar to GLIOMA PATHOGENESIS-RELATED PROTEIN Length = 1723 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ggaaaaagaagagagagagg 83 |||||||||||||||||||| Sbjct: 1003 ggaaaaagaagagagagagg 1022
>gb|AE011839.1| Xanthomonas axonopodis pv. citri str. 306, section 217 of 469 of the complete genome Length = 11024 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 ccacctcgccgccccactcg 458 |||||||||||||||||||| Sbjct: 3486 ccacctcgccgccccactcg 3467
>gb|AY073404.1| Mus musculus olfactory receptor MOR202-15 gene, complete cds Length = 927 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ttcatcacatttcttgctat 188 |||||||||||||||||||| Sbjct: 79 ttcatcacatttcttgctat 98
>gb|AF339885.1|AF339885 Sus scrofa mannose-6-phosphate/insulin-like growth factor II receptor (m6p/igf2r) mRNA, partial cds Length = 6900 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 actgctcggtgaaggacccg 296 |||||||||||||||||||| Sbjct: 3500 actgctcggtgaaggacccg 3519
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tggaaaaagaagagagagaggtgt 86 |||||||| ||||||||||||||| Sbjct: 12323983 tggaaaaaaaagagagagaggtgt 12324006
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 432 gtgttcaccacctcgccgccccactcga 459 ||||| || ||||||||||||||||||| Sbjct: 28348499 gtgttgacgacctcgccgccccactcga 28348526 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ggaaaaagaagagagagagg 83 |||||||||||||||||||| Sbjct: 24594961 ggaaaaagaagagagagagg 24594942
>gb|AC121761.4| Homo sapiens 12 BAC RP11-585P4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170917 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ggaaaaagaagagagagagg 83 |||||||||||||||||||| Sbjct: 101243 ggaaaaagaagagagagagg 101262
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ggaaaaagaagagagagagg 83 |||||||||||||||||||| Sbjct: 103221 ggaaaaagaagagagagagg 103202
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 432 gtgttcaccacctcgccgccccactcga 459 ||||| || ||||||||||||||||||| Sbjct: 77305 gtgttgacgacctcgccgccccactcga 77332
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 432 gtgttcaccacctcgccgccccactcga 459 ||||| || ||||||||||||||||||| Sbjct: 140314 gtgttgacgacctcgccgccccactcga 140341
>dbj|AK107465.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-A10, full insert sequence Length = 1554 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 432 gtgttcaccacctcgccgccccactcga 459 ||||| || ||||||||||||||||||| Sbjct: 1184 gtgttgacgacctcgccgccccactcga 1157
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tggaaaaagaagagagagaggtgt 86 |||||||| ||||||||||||||| Sbjct: 12331323 tggaaaaaaaagagagagaggtgt 12331346 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,256,618 Number of Sequences: 3902068 Number of extensions: 4256618 Number of successful extensions: 97431 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96754 Number of HSP's gapped (non-prelim): 673 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)