Clone Name | rbart20c10 |
---|---|
Clone Library Name | barley_pub |
>Q300_MOUSE (Q02722) Protein Q300| Length = 77 Score = 30.4 bits (67), Expect = 1.2 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -1 Query: 114 YLCVGSCICVCAQSCVPCVVIRSMGSLVLISPHSFSC 4 Y+CV C+CVC C + +S G+L S + C Sbjct: 26 YVCVCVCVCVCVCVCTLTCMCKSGGNLGCSSSGAIHC 62
>PIP21_ORYSA (Q8H5N9) Probable aquaporin PIP2.1 (Plasma membrane intrinsic| protein 2a) (PIP2a) (OsPIP2.1) Length = 290 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/14 (100%), Positives = 14/14 (100%) Frame = -1 Query: 285 AGAIKALGSFRSNA 244 AGAIKALGSFRSNA Sbjct: 277 AGAIKALGSFRSNA 290
>FPRB_MYCTU (P65528) Probable ferredoxin/ferredoxin--NADP reductase (EC| 1.18.1.2) (FNR) Length = 575 Score = 29.6 bits (65), Expect = 2.1 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Frame = -1 Query: 237 VIHVMCMQD*SNGALC---CVHPSKEKAAFATSRQ-FSCPLQWSCYLCVGSCICVCAQSC 70 VI C D S C C+HP+ ++ FATS + P+ +C C G+C+ C S Sbjct: 4 VITQSCCNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPV--ACVDC-GACVTACPVSA 60 Query: 69 V 67 + Sbjct: 61 I 61
>FPRB_MYCBO (P65529) Probable ferredoxin/ferredoxin--NADP reductase (EC| 1.18.1.2) (FNR) Length = 575 Score = 29.6 bits (65), Expect = 2.1 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Frame = -1 Query: 237 VIHVMCMQD*SNGALC---CVHPSKEKAAFATSRQ-FSCPLQWSCYLCVGSCICVCAQSC 70 VI C D S C C+HP+ ++ FATS + P+ +C C G+C+ C S Sbjct: 4 VITQSCCNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPV--ACVDC-GACVTACPVSA 60 Query: 69 V 67 + Sbjct: 61 I 61
>CR015_HUMAN (Q96N68) Protein C18orf15| Length = 181 Score = 29.6 bits (65), Expect = 2.1 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = -1 Query: 207 SNGALCCVHPSKEKAAFATSRQFSCPLQWSC-YLCVGSCICVCAQSCVPCVVIRSMGSLV 31 + G C VHP + C +C Y+C+ +C+CA +C+ M Sbjct: 112 ARGPCCPVHPQSLTVVCMCACMCVCVHVCACVYVCMCVLVCMCACACMRAHRYFLMDCAG 171 Query: 30 LISPH 16 + SPH Sbjct: 172 ICSPH 176
>HEPC1_SALSA (Q801Y3) Hepcidin-1 precursor| Length = 86 Score = 28.1 bits (61), Expect = 6.0 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 Query: 103 RQLHMRMCPVMRAVCCNSVHGIAC 32 RQ+H+ +C +CCN H I C Sbjct: 61 RQIHLSLC----GLCCNCCHNIGC 80
>YEN6_SCHPO (O13699) Hypothetical UPF0300 protein C11G7.06c in chromosome I| Length = 430 Score = 27.7 bits (60), Expect = 7.9 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +1 Query: 112 ITRPLQRATELARSCKSGFLFGW--MDTAQGAIASILHAHHMDNSLRV 249 I R + LARSC SGF W M T+ G+ AS + H S R+ Sbjct: 269 IFRRRSKYFNLARSCVSGFELSWLIMMTSIGSNASAVPVHAYLASKRI 316
>PI3R5_PIG (O02696) Phosphoinositide 3-kinase regulatory subunit 5 (PI3-kinase| regulatory subunit 5) (PI3-kinase p101 subunit) (PtdIns-3-kinase p101) (p101-PI3K) (Phosphatidylinositol-4,5-bisphosphate 3-kinase regulatory subunit) (PtdIns-3-kinase regulato Length = 877 Score = 27.7 bits (60), Expect = 7.9 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = -3 Query: 193 VLCPSIQRESRFCNFSPVQLP-AAMVVLFMCR 101 VLC S++ E R SP QLP A ++L+ CR Sbjct: 630 VLCQSLKAEPRPLEGSPAQLPILADMLLYYCR 661
>PIP27_ARATH (P93004) Aquaporin PIP2.7 (Plasma membrane intrinsic protein 3)| (Salt stress-induced major intrinsic protein) Length = 280 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -1 Query: 285 AGAIKALGSFRSNA 244 A AIKALGSFRSNA Sbjct: 265 ASAIKALGSFRSNA 278
>FPRB_MYCLE (O33064) Probable ferredoxin/ferredoxin--NADP reductase (EC| 1.18.1.2) (FNR) Length = 555 Score = 27.7 bits (60), Expect = 7.9 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = -1 Query: 237 VIHVMCMQD*SNGALC---CVHPSKEKAAFATSRQ-FSCPLQWSCYLCVGSCICVC 82 +I C D S C C+HP+ ++ FATS + P+ +C C G+C+ C Sbjct: 4 IITQSCCNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPV--ACVDC-GACVSAC 56
>CRR1_ASHGO (Q75A41) Probable glycosidase CRR1 precursor (EC 3.2.-.-)| (CRH-related protein 1) Length = 450 Score = 27.7 bits (60), Expect = 7.9 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 2/43 (4%) Frame = -1 Query: 186 VHPSKEKAAFATSRQFSCPLQWSCYLCVGSCIC--VCAQSCVP 64 V P K A S CP +W C G C +C C P Sbjct: 20 VEPFKSNPYIACSEASHCPKEWPCCSQYGQCGSGPLCISGCNP 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,772,658 Number of Sequences: 219361 Number of extensions: 790150 Number of successful extensions: 2377 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2290 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2368 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)