Clone Name | rbart20c06 |
---|---|
Clone Library Name | barley_pub |
>AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase IG (EC 3.6.3.1)| (ATPase class I type 11C) (ATPase IG) (ATPase IQ) (ATPase class VI type 11C) Length = 1132 Score = 30.4 bits (67), Expect = 2.7 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -3 Query: 127 YFFFLRIPRYITTWVYVLLCLFVSLFARV 41 YF F ++ ++TW+ ++L +F+SLF + Sbjct: 1057 YFVFAQMLSSVSTWLAIILLIFISLFPEI 1085
>VGLM_BUNSH (P04875) M polyprotein precursor [Contains: Glycoprotein G2;| Nonstructural protein NS-M; Glycoprotein G1] Length = 1441 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 8/50 (16%) Frame = -3 Query: 133 ISYFFFLRIPRYITTWVYVLLCLFVSL--------FARVGRLYEQQCDVF 8 I++++F+ I Y TW +++ L + L F+ + +Y ++CD++ Sbjct: 354 INFYYFVCIMNYAVTWGLIIIGLLIGLLFKKYQHRFSNLYAMYCEECDMY 403
>ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44| Length = 258 Score = 29.6 bits (65), Expect = 4.6 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = -1 Query: 489 EEEEEDGHRQDKDE--GLKMKLFRRFHHHHAHDSENEVDEVEELARKLG 349 EE EE G ++ K E GLK K+ + HH D+ V+ V E +K G Sbjct: 93 EEVEEGGEKKKKKEKKGLKEKIEEKIHHKE-EDTSVPVEVVTEPEKKKG 140
>AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 11C (EC 3.6.3.1)| (Fragment) Length = 347 Score = 29.6 bits (65), Expect = 4.6 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -3 Query: 127 YFFFLRIPRYITTWVYVLLCLFVSLFARV 41 YF F ++ ++TW+ ++L +F+SLF + Sbjct: 285 YFVFAQMLCSVSTWLAIILLIFISLFPEI 313
>CTRO_MOUSE (P49025) Citron Rho-interacting kinase (EC 2.7.11.1) (CRIK)| (Rho-interacting, serine/threonine-protein kinase 21) Length = 2055 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -1 Query: 492 AEEEEEDGH-RQDKDEGLKMKLFRRFHHHHAHDSENEVDEVEELARK 355 AE E E H R+D EG+K KL H EN+V +E + R+ Sbjct: 668 AERELEKLHNREDSSEGIKKKLVEA--EERRHSLENKVKRLETMERR 712
>LEGB_PEA (P14594) Legumin B [Contains: Legumin B alpha chain (Legumin B| acidic chain); Legumin B beta chain (Legumin B basic chain)] (Fragment) Length = 338 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -1 Query: 495 DAEEEEEDGHRQDKDEGLKMKLFRRFHHHHAHDSENEVDEVEE 367 + +EEEE H Q K+E + + R H D + + +E EE Sbjct: 50 ELQEEEEQSHSQRKEEEEEEQEQRHRKHSKKEDEDEDEEEEEE 92
>FKBP3_CANGA (Q6FKH7) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) Length = 437 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = -1 Query: 486 EEEEDGHRQDKDEGLKMKLFRRFHHHHAHDSENEVDEVEELARK 355 EE E ++ +E K ++ HHH HD +++ D + K Sbjct: 240 EEIEASEEEESEEEEKKSKHKKHDHHHHHDHDHDHDHEHKSKNK 283 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,729,780 Number of Sequences: 219361 Number of extensions: 944330 Number of successful extensions: 4011 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3233 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3873 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)