Clone Name | rbart20c04 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 168 bits (425), Expect = 3e-42 Identities = 74/85 (87%), Positives = 78/85 (91%) Frame = -1 Query: 384 ESDNGCTQNFGWEGSWNEWTAAYPATRLYVGLTADDKSYQWVHPKNVYSSVAPVSQKKDN 205 ESD C QN GWEGSW++WTAAYPATR YVGLTADDKS+QWVHPKNVY VAPV+QKKDN Sbjct: 220 ESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDN 279 Query: 204 YGGIMLWDRYFDKQTNYSSLIKYYA 130 YGGIMLWDRYFDKQTNYSSLIKYYA Sbjct: 280 YGGIMLWDRYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 77.8 bits (190), Expect = 6e-15 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 6/89 (6%) Frame = -1 Query: 378 DNGCTQNF----GWEGSWNEWTAAYPATRLYVGLTADDK--SYQWVHPKNVYSSVAPVSQ 217 D C+ N G WN+WTA YP + +Y+GL A + V K +Y + P Q Sbjct: 216 DATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQ 275 Query: 216 KKDNYGGIMLWDRYFDKQTNYSSLIKYYA 130 K NYGGIMLWDR++DKQT Y +KY+A Sbjct: 276 KAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 65.9 bits (159), Expect = 2e-11 Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%) Frame = -1 Query: 378 DNGCTQNFGWEGSWNEWTAAYPATRLYVGLTAD-DKSYQWVHPKNVYSSVAPVSQKKDNY 202 D CT + + SW +W AA+P +++Y+GL A ++ W+ K++Y + + NY Sbjct: 213 DEQCTMSPRY--SWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNY 270 Query: 201 GGIMLWDRYFDKQTNYS 151 GG+ ++DRYFDK+ NY+ Sbjct: 271 GGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 60.1 bits (144), Expect = 1e-09 Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%) Frame = -1 Query: 342 SWNEWTAAYPATRLYVGLTADDKSY-QWVHPKNVYSS-VAPVSQKKDNYGGIMLWDRYFD 169 SWN WT++ +T ++GL A + + P NV +S + PV ++ YGG+MLW +Y+D Sbjct: 229 SWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYD 288 Query: 168 KQTNYSSLIK 139 Q+ YSS IK Sbjct: 289 DQSGYSSSIK 298
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 56.6 bits (135), Expect = 1e-08 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Frame = -1 Query: 375 NGCTQNFGWEGSWNEWTAAYPATRLYVGLTADDKSYQ--WVHPKNVYSSVAPVSQKKDNY 202 +G TQN SWN+WT + A + ++GL A ++ ++ P + S + P +K Y Sbjct: 221 SGNTQNLF--DSWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKY 278 Query: 201 GGIMLWDRYFDKQTNYSSLI 142 GG+MLW +++D + YSS I Sbjct: 279 GGVMLWSKFWDDKNGYSSSI 298
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 55.8 bits (133), Expect = 2e-08 Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 5/72 (6%) Frame = -1 Query: 339 WNEWTAAYPATRLYVGL----TADDKSYQWVHPKNVY-SSVAPVSQKKDNYGGIMLWDRY 175 WN+WT+ PA +LY+GL TA Y PK V S V P + YGG+MLW+R Sbjct: 224 WNQWTSI-PAKKLYIGLPAAKTAAGNGYI---PKQVLMSQVLPFLKGSSKYGGVMLWNRK 279 Query: 174 FDKQTNYSSLIK 139 FD Q YSS I+ Sbjct: 280 FDVQCGYSSAIR 291
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 55.8 bits (133), Expect = 2e-08 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Frame = -1 Query: 342 SWNEWTAAYPATRLYVGLTADDKSYQ--WVHPKNVYSSVAPVSQKKDNYGGIMLWDRYFD 169 SWN WT + A ++++GL A ++ +V P + S + P +K YGG+MLW +++D Sbjct: 227 SWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYD 286 Query: 168 KQTNYSSLI 142 + YSS I Sbjct: 287 DKNGYSSSI 295
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 52.8 bits (125), Expect = 2e-07 Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%) Frame = -1 Query: 342 SWNEWTAAYPATRLYVGLTADDK---SYQWVHPKNVYSSVAPVSQKKDNYGGIMLWDRYF 172 SWN+WTA +P ++LY+GL A + S ++ + S V P + NYGG+MLW + F Sbjct: 221 SWNQWTA-FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAF 279 Query: 171 DKQTNYSSLIK 139 D YS IK Sbjct: 280 D--NGYSDSIK 288
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 51.6 bits (122), Expect = 5e-07 Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 3/71 (4%) Frame = -1 Query: 342 SWNEWTAAYPATRLYVGLTADDKSYQ--WVHPKNVYSS-VAPVSQKKDNYGGIMLWDRYF 172 +WN+WT++ A ++++G+ A D + + P +V +S V P + YGG+M+WDR+ Sbjct: 221 AWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFN 279 Query: 171 DKQTNYSSLIK 139 D Q+ YS+ IK Sbjct: 280 DAQSGYSNAIK 290
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 49.3 bits (116), Expect = 2e-06 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Frame = -1 Query: 342 SWNEWTAAYPATRLYVGLTADDKSYQ--WVHPKNVYSSVAPVSQKKDNYGGIMLWDRYFD 169 SWN+WT++ A +L++G+ A + ++ + S V P + YGG+MLWDR+ D Sbjct: 227 SWNQWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFND 285 Query: 168 KQTNYSSLI 142 Q+ YS I Sbjct: 286 GQSGYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 44.7 bits (104), Expect = 6e-05 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Frame = -1 Query: 342 SWNEWTAAYPATRLYVGLTA--DDKSYQWVHPKNVYSSVAPVSQKKDNYGGIMLWDRYFD 169 SWN+WT A ++++GL A D ++ + S V P + YGG+MLW + +D Sbjct: 224 SWNQWTTVQ-ANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD 282 Query: 168 KQTNYSSLIK 139 + YSS IK Sbjct: 283 --SGYSSAIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 42.0 bits (97), Expect = 4e-04 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Frame = -1 Query: 339 WNEWTAAYPATRLYVGL-TADDKSYQWVHPKNVY-SSVAPVSQKKDNYGGIMLWDRYFDK 166 WN+W A A ++++GL A + P +V S V P+ YGG+MLW +++D Sbjct: 223 WNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD- 280 Query: 165 QTNYSSLIK 139 YSS IK Sbjct: 281 -NGYSSAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 37.0 bits (84), Expect = 0.012 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%) Frame = -1 Query: 381 SDNGCTQNFG----WEGSWNEWT-AAYPATR-LYVGLTADDKSYQ---WVHPKNVYSSVA 229 +D C + G +W WT + YP + L++ L A + ++ P + V Sbjct: 215 NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSALIGQVL 274 Query: 228 P-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 136 P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 275 PYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = +3 Query: 177 TGPRA*CRRSCPSSATPARRWSRRSWGVPTGRT 275 TGPRA C R SS PARR R PT T Sbjct: 968 TGPRA-CPREAESSEEPARRHRARHKAPPTQET 999
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -1 Query: 357 FGWE----GSWNEWTAAYPATRLYVGLTADDKSYQWVHPKNVYSSVAPVSQKKDNYGGIM 190 FG+E G ++ W+A + LYVG K H + + AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 189 -LW-DRYFDKQTN 157 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348
>PIMT_AERPE (Q9YDA1) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)| (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) Length = 256 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = -3 Query: 316 PCHPVIRR-AHGGRQVLPVGTPQERLL 239 P P++ + A GGR V+P+GTP ++L Sbjct: 187 PPKPLVEQLAPGGRMVIPIGTPDLQIL 213
>CHIA_RAT (Q6RY07) Acidic mammalian chitinase precursor (EC 3.2.1.14)| (AMCase) Length = 473 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -1 Query: 345 GSWNEWTAAYPATRLYVGLTADDKSYQWVHPKNVYS-SVAPVSQKKDNYGGIMLW 184 G+ +W A Y K +WV N+ S SV K++N+GG M+W Sbjct: 313 GATQDWDAPQEVPYAY-------KGNEWVGYDNIKSFSVKAQWLKQNNFGGAMIW 360
>GCN2_ARATH (Q9LX30) Probable serine/threonine-protein kinase GCN2 (EC| 2.7.11.1) Length = 1241 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +2 Query: 272 DLSSAVSPTYNRVAGYAAVHSFHEPSHPKFWVHP 373 DL+S SP +NR +A + S P+FW P Sbjct: 373 DLASKSSPDFNRTFEHAFNQNMASTSVPQFWEPP 406
>Y3971_BACC1 (Q732E3) UPF0348 protein BCE3971| Length = 393 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/47 (25%), Positives = 26/47 (55%) Frame = -1 Query: 312 ATRLYVGLTADDKSYQWVHPKNVYSSVAPVSQKKDNYGGIMLWDRYF 172 AT + L +++ S+ + P ++ + ++ K NYG + W++YF Sbjct: 185 ATSIRKQLFSENSSFTEIEPFIPKATASLLASYKQNYGTLHNWEQYF 231
>YDZ5_SCHPO (O13712) Protein C14C4.05c in chromosome I| Length = 844 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -1 Query: 288 TADDKSYQWVHPKNVYSSVAPVSQ 217 T ++ S+ W HPK SS P SQ Sbjct: 331 TPENNSFSWTHPKKNSSSPLPQSQ 354
>PIMT_GEOSL (Q74CZ5) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)| (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) Length = 207 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = -3 Query: 286 GGRQVLPVGTPQERLLQRRAGVAEEGQLRRHHALG 182 GGR V+PVGT E++L R E+G + R + G Sbjct: 158 GGRLVIPVGTQFEQVLV-RVVKQEDGSVERENITG 191 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,944,378 Number of Sequences: 219361 Number of extensions: 798210 Number of successful extensions: 2372 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2323 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2362 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)