ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart20c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 168 3e-42
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 78 6e-15
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 66 2e-11
4CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 60 1e-09
5CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 57 1e-08
6CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 56 2e-08
7CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 56 2e-08
8CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 53 2e-07
9CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 52 5e-07
10CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 49 2e-06
11CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 45 6e-05
12CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 42 4e-04
13CONB_CANEN (P49347) Concanavalin B precursor (Con B) 37 0.012
14CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel al... 29 3.1
15G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (... 28 4.1
16PIMT_AERPE (Q9YDA1) Protein-L-isoaspartate O-methyltransferase (... 28 7.0
17CHIA_RAT (Q6RY07) Acidic mammalian chitinase precursor (EC 3.2.1... 28 7.0
18GCN2_ARATH (Q9LX30) Probable serine/threonine-protein kinase GCN... 28 7.0
19Y3971_BACC1 (Q732E3) UPF0348 protein BCE3971 27 9.1
20YDZ5_SCHPO (O13712) Protein C14C4.05c in chromosome I 27 9.1
21PIMT_GEOSL (Q74CZ5) Protein-L-isoaspartate O-methyltransferase (... 27 9.1

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score =  168 bits (425), Expect = 3e-42
 Identities = 74/85 (87%), Positives = 78/85 (91%)
 Frame = -1

Query: 384 ESDNGCTQNFGWEGSWNEWTAAYPATRLYVGLTADDKSYQWVHPKNVYSSVAPVSQKKDN 205
           ESD  C QN GWEGSW++WTAAYPATR YVGLTADDKS+QWVHPKNVY  VAPV+QKKDN
Sbjct: 220 ESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDN 279

Query: 204 YGGIMLWDRYFDKQTNYSSLIKYYA 130
           YGGIMLWDRYFDKQTNYSSLIKYYA
Sbjct: 280 YGGIMLWDRYFDKQTNYSSLIKYYA 304



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
 Frame = -1

Query: 378 DNGCTQNF----GWEGSWNEWTAAYPATRLYVGLTADDK--SYQWVHPKNVYSSVAPVSQ 217
           D  C+ N     G    WN+WTA YP + +Y+GL A +       V  K +Y  + P  Q
Sbjct: 216 DATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQ 275

Query: 216 KKDNYGGIMLWDRYFDKQTNYSSLIKYYA 130
           K  NYGGIMLWDR++DKQT Y   +KY+A
Sbjct: 276 KAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -1

Query: 378 DNGCTQNFGWEGSWNEWTAAYPATRLYVGLTAD-DKSYQWVHPKNVYSSVAPVSQKKDNY 202
           D  CT +  +  SW +W AA+P +++Y+GL A  ++   W+  K++Y  +    +   NY
Sbjct: 213 DEQCTMSPRY--SWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNY 270

Query: 201 GGIMLWDRYFDKQTNYS 151
           GG+ ++DRYFDK+ NY+
Sbjct: 271 GGLAIYDRYFDKKANYT 287



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
 Frame = -1

Query: 342 SWNEWTAAYPATRLYVGLTADDKSY-QWVHPKNVYSS-VAPVSQKKDNYGGIMLWDRYFD 169
           SWN WT++  +T  ++GL A   +  +   P NV +S + PV ++   YGG+MLW +Y+D
Sbjct: 229 SWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYD 288

Query: 168 KQTNYSSLIK 139
            Q+ YSS IK
Sbjct: 289 DQSGYSSSIK 298



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
 Frame = -1

Query: 375 NGCTQNFGWEGSWNEWTAAYPATRLYVGLTADDKSYQ--WVHPKNVYSSVAPVSQKKDNY 202
           +G TQN     SWN+WT +  A + ++GL A  ++    ++ P  + S + P  +K   Y
Sbjct: 221 SGNTQNLF--DSWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKY 278

Query: 201 GGIMLWDRYFDKQTNYSSLI 142
           GG+MLW +++D +  YSS I
Sbjct: 279 GGVMLWSKFWDDKNGYSSSI 298



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
 Frame = -1

Query: 339 WNEWTAAYPATRLYVGL----TADDKSYQWVHPKNVY-SSVAPVSQKKDNYGGIMLWDRY 175
           WN+WT+  PA +LY+GL    TA    Y    PK V  S V P  +    YGG+MLW+R 
Sbjct: 224 WNQWTSI-PAKKLYIGLPAAKTAAGNGYI---PKQVLMSQVLPFLKGSSKYGGVMLWNRK 279

Query: 174 FDKQTNYSSLIK 139
           FD Q  YSS I+
Sbjct: 280 FDVQCGYSSAIR 291



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
 Frame = -1

Query: 342 SWNEWTAAYPATRLYVGLTADDKSYQ--WVHPKNVYSSVAPVSQKKDNYGGIMLWDRYFD 169
           SWN WT +  A ++++GL A  ++    +V P  + S + P  +K   YGG+MLW +++D
Sbjct: 227 SWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYD 286

Query: 168 KQTNYSSLI 142
            +  YSS I
Sbjct: 287 DKNGYSSSI 295



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
 Frame = -1

Query: 342 SWNEWTAAYPATRLYVGLTADDK---SYQWVHPKNVYSSVAPVSQKKDNYGGIMLWDRYF 172
           SWN+WTA +P ++LY+GL A  +   S  ++    + S V P  +   NYGG+MLW + F
Sbjct: 221 SWNQWTA-FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAF 279

Query: 171 DKQTNYSSLIK 139
           D    YS  IK
Sbjct: 280 D--NGYSDSIK 288



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
 Frame = -1

Query: 342 SWNEWTAAYPATRLYVGLTADDKSYQ--WVHPKNVYSS-VAPVSQKKDNYGGIMLWDRYF 172
           +WN+WT++  A ++++G+ A D +     + P +V +S V P  +    YGG+M+WDR+ 
Sbjct: 221 AWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFN 279

Query: 171 DKQTNYSSLIK 139
           D Q+ YS+ IK
Sbjct: 280 DAQSGYSNAIK 290



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
 Frame = -1

Query: 342 SWNEWTAAYPATRLYVGLTADDKSYQ--WVHPKNVYSSVAPVSQKKDNYGGIMLWDRYFD 169
           SWN+WT++  A +L++G+ A   +    ++    + S V P  +    YGG+MLWDR+ D
Sbjct: 227 SWNQWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFND 285

Query: 168 KQTNYSSLI 142
            Q+ YS  I
Sbjct: 286 GQSGYSGAI 294



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
 Frame = -1

Query: 342 SWNEWTAAYPATRLYVGLTA--DDKSYQWVHPKNVYSSVAPVSQKKDNYGGIMLWDRYFD 169
           SWN+WT    A ++++GL A  D     ++    + S V P  +    YGG+MLW + +D
Sbjct: 224 SWNQWTTVQ-ANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD 282

Query: 168 KQTNYSSLIK 139
             + YSS IK
Sbjct: 283 --SGYSSAIK 290



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = -1

Query: 339 WNEWTAAYPATRLYVGL-TADDKSYQWVHPKNVY-SSVAPVSQKKDNYGGIMLWDRYFDK 166
           WN+W A   A ++++GL  A   +     P +V  S V P+      YGG+MLW +++D 
Sbjct: 223 WNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD- 280

Query: 165 QTNYSSLIK 139
              YSS IK
Sbjct: 281 -NGYSSAIK 288



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
 Frame = -1

Query: 381 SDNGCTQNFG----WEGSWNEWT-AAYPATR-LYVGLTADDKSYQ---WVHPKNVYSSVA 229
           +D  C  + G       +W  WT + YP  + L++ L A   +     ++ P  +   V 
Sbjct: 215 NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSALIGQVL 274

Query: 228 P-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 136
           P +   +  Y GI LW+R  DK+T YS ++I+Y
Sbjct: 275 PYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307



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>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/33 (51%), Positives = 17/33 (51%)
 Frame = +3

Query: 177  TGPRA*CRRSCPSSATPARRWSRRSWGVPTGRT 275
            TGPRA C R   SS  PARR   R    PT  T
Sbjct: 968  TGPRA-CPREAESSEEPARRHRARHKAPPTQET 999



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>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 561

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
 Frame = -1

Query: 357 FGWE----GSWNEWTAAYPATRLYVGLTADDKSYQWVHPKNVYSSVAPVSQKKDNYGGIM 190
           FG+E    G ++ W+A   +  LYVG     K     H  + +   AP+ +     GGI+
Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335

Query: 189 -LW-DRYFDKQTN 157
            +W   +++ QT+
Sbjct: 336 SVWYSNFYNAQTH 348



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>PIMT_AERPE (Q9YDA1) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)|
           (Protein-beta-aspartate methyltransferase) (PIMT)
           (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl
           protein carboxyl methyltransferase)
          Length = 256

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -3

Query: 316 PCHPVIRR-AHGGRQVLPVGTPQERLL 239
           P  P++ + A GGR V+P+GTP  ++L
Sbjct: 187 PPKPLVEQLAPGGRMVIPIGTPDLQIL 213



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>CHIA_RAT (Q6RY07) Acidic mammalian chitinase precursor (EC 3.2.1.14)|
           (AMCase)
          Length = 473

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -1

Query: 345 GSWNEWTAAYPATRLYVGLTADDKSYQWVHPKNVYS-SVAPVSQKKDNYGGIMLW 184
           G+  +W A       Y       K  +WV   N+ S SV     K++N+GG M+W
Sbjct: 313 GATQDWDAPQEVPYAY-------KGNEWVGYDNIKSFSVKAQWLKQNNFGGAMIW 360



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>GCN2_ARATH (Q9LX30) Probable serine/threonine-protein kinase GCN2 (EC|
           2.7.11.1)
          Length = 1241

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 272 DLSSAVSPTYNRVAGYAAVHSFHEPSHPKFWVHP 373
           DL+S  SP +NR   +A   +    S P+FW  P
Sbjct: 373 DLASKSSPDFNRTFEHAFNQNMASTSVPQFWEPP 406



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>Y3971_BACC1 (Q732E3) UPF0348 protein BCE3971|
          Length = 393

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = -1

Query: 312 ATRLYVGLTADDKSYQWVHPKNVYSSVAPVSQKKDNYGGIMLWDRYF 172
           AT +   L +++ S+  + P    ++ + ++  K NYG +  W++YF
Sbjct: 185 ATSIRKQLFSENSSFTEIEPFIPKATASLLASYKQNYGTLHNWEQYF 231



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>YDZ5_SCHPO (O13712) Protein C14C4.05c in chromosome I|
          Length = 844

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 288 TADDKSYQWVHPKNVYSSVAPVSQ 217
           T ++ S+ W HPK   SS  P SQ
Sbjct: 331 TPENNSFSWTHPKKNSSSPLPQSQ 354



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>PIMT_GEOSL (Q74CZ5) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)|
           (Protein-beta-aspartate methyltransferase) (PIMT)
           (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl
           protein carboxyl methyltransferase)
          Length = 207

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 286 GGRQVLPVGTPQERLLQRRAGVAEEGQLRRHHALG 182
           GGR V+PVGT  E++L  R    E+G + R +  G
Sbjct: 158 GGRLVIPVGTQFEQVLV-RVVKQEDGSVERENITG 191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,944,378
Number of Sequences: 219361
Number of extensions: 798210
Number of successful extensions: 2372
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2362
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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