>gb|AC008055.7| Homo sapiens 12 BAC RP11-718L23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 196753

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 169    aaaatgggcttaaaaatccctcc 191
              |||||||||||||||||||||||
Sbjct: 111841 aaaatgggcttaaaaatccctcc 111819

>ref|XM_798334.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.160.0350)
           partial mRNA
          Length = 1614

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 126 gggaaaagagttgatcaaatagctct 151
           |||||||||||||||||||| |||||
Sbjct: 793 gggaaaagagttgatcaaatcgctct 768

>gb|AC108949.4| Mus musculus BAC clone RP23-451K2 from 6, complete sequence
          Length = 181571

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 117    aaaattaaagggaaaagagttgatc 141
              ||||||||||||||||||| |||||
Sbjct: 127020 aaaattaaagggaaaagaggtgatc 127044

>emb|BX936464.7| Zebrafish DNA sequence from clone DKEY-246O4 in linkage group 18,
             complete sequence
          Length = 167114

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 179   taaaaatccctcctattttaa 199
             |||||||||||||||||||||
Sbjct: 33412 taaaaatccctcctattttaa 33392

>gb|AC119995.22| Mus musculus chromosome 3, clone RP24-120B18, complete sequence
          Length = 182140

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 42   gccatgggggagctattgtctgtac 66
            ||||||||| |||||||||||||||
Sbjct: 5077 gccatggggaagctattgtctgtac 5053

>emb|AL691419.10| Mouse DNA sequence from clone RP23-95I4 on chromosome 3, complete
            sequence
          Length = 249405

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 42   gccatgggggagctattgtctgtac 66
            ||||||||| |||||||||||||||
Sbjct: 3480 gccatggggaagctattgtctgtac 3504

>gb|AC130713.4| Mus musculus BAC clone RP23-316K10 from chromosome 15, complete
             sequence
          Length = 192020

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   tagctctctgtgttttcaca 164
             ||||||||||||||||||||
Sbjct: 64340 tagctctctgtgttttcaca 64359

>emb|CR656067.2|CNS0F56X Tetraodon nigroviridis full-length cDNA
          Length = 378

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   gagcagcaaaacacatattt 25
           ||||||||||||||||||||
Sbjct: 335 gagcagcaaaacacatattt 354

>gb|AC164704.4| Mus musculus BAC clone RP23-238D20 from chromosome 6, complete sequence
          Length = 189119

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      acagagcagcaaaacacata 22
              ||||||||||||||||||||
Sbjct: 142880 acagagcagcaaaacacata 142899

>emb|AL133461.10| Human DNA sequence from clone RP11-359E7 on chromosome 10 Contains the
             3' end of the SAC2 gene for Sac domain-containing inositol
             phosphatase 2, a novel gene (FLJ13081), the 5' end of the
             SEC23IP gene for SEC23 interacting protein, a novel gene
             and three CpG islands, complete sequence
          Length = 124328

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   ctctgtgttttcacaaagta 169
             ||||||||||||||||||||
Sbjct: 35480 ctctgtgttttcacaaagta 35461

>emb|BX901978.14| Zebrafish DNA sequence from clone DKEY-155M6 in linkage group 18,
             complete sequence
          Length = 168101

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   agggaaaagagttgatcaaa 144
             ||||||||||||||||||||
Sbjct: 79324 agggaaaagagttgatcaaa 79305

>gb|AC027672.12| Homo sapiens chromosome 10 clone RP11-198M6, complete sequence
          Length = 187229

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    ctctgtgttttcacaaagta 169
              ||||||||||||||||||||
Sbjct: 183859 ctctgtgttttcacaaagta 183878

>gb|AC157823.2| Mus musculus BAC clone RP23-382L21 from chromosome 12, complete
             sequence
          Length = 203726

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   aagtaaaatgggcttaaaaa 184
             ||||||||||||||||||||
Sbjct: 96991 aagtaaaatgggcttaaaaa 96972

>gb|AC006385.3|AC006385 Homo sapiens BAC clone RP11-559J5 from 2, complete sequence
          Length = 173508

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    ttttcacaaagtaaaatggg 176
              ||||||||||||||||||||
Sbjct: 146703 ttttcacaaagtaaaatggg 146722

>emb|BX465846.14| Zebrafish DNA sequence from clone CH211-215B21 in linkage group 18,
             complete sequence
          Length = 109342

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   agggaaaagagttgatcaaa 144
             ||||||||||||||||||||
Sbjct: 51934 agggaaaagagttgatcaaa 51953

>gb|AC144774.3| Mus musculus BAC clone RP24-128I18 from 6, complete sequence
          Length = 143838

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      acagagcagcaaaacacata 22
              ||||||||||||||||||||
Sbjct: 120824 acagagcagcaaaacacata 120805

>emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2-181d5, COMPLETE SEQUENCE
          Length = 89591

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  tgttttcacaaagtaaaatg 174
            ||||||||||||||||||||
Sbjct: 2420 tgttttcacaaagtaaaatg 2439

>emb|Z70781.1|CEF57A8 Caenorhabditis elegans Cosmid F57A8, complete sequence
          Length = 30894

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     cagagcagcaaaacacatat 23
             ||||||||||||||||||||
Sbjct: 10405 cagagcagcaaaacacatat 10424

>emb|AL669905.14| Mouse DNA sequence from clone RP23-110H24 on chromosome 4, complete
             sequence
          Length = 138217

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    ctcattgcagccctgaaaca 87
             ||||||||||||||||||||
Sbjct: 60221 ctcattgcagccctgaaaca 60240


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,710,821
Number of Sequences: 3902068
Number of extensions: 2710821
Number of successful extensions: 51980
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51954
Number of HSP's gapped (non-prelim): 26
length of query: 291
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 269
effective length of database: 17,147,199,772
effective search space: 4612596738668
effective search space used: 4612596738668
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)