Clone Name | rbart20b07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14) | 30 | 1.8 | 2 | CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14) | 29 | 3.1 | 3 | SODM_ACIAD (Q59094) Superoxide dismutase [Mn] precursor (EC 1.15... | 29 | 4.0 |
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>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 30.0 bits (66), Expect = 1.8 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +2 Query: 5 YISIQFYSRHIRNTGTGHSFHQKYWNENAAFAKPGRDTLLIKTPHGEIEIAAGS 166 Y+++QFY+ + + TG SF+ W+ A P ++ ++ T G AAGS Sbjct: 214 YVNVQFYNNYC--SATGSSFNFDTWDNWAKTTSPNKNVKIMFTVPGS-STAAGS 264
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 29.3 bits (64), Expect = 3.1 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +2 Query: 5 YISIQFYSRHIRNTGTGHSFHQKYWNENAAFAKPGRDTLLIKTPHGEIEIAAGS 166 Y+++QFY+ + + TG SF+ W+ A P ++ ++ T G AAGS Sbjct: 214 YVNVQFYNNYC--SATGSSFNFDTWDNWAKTTSPNKNVKIMFTIPGS-PTAAGS 264
>SODM_ACIAD (Q59094) Superoxide dismutase [Mn] precursor (EC 1.15.1.1)| Length = 228 Score = 28.9 bits (63), Expect = 4.0 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +2 Query: 14 IQFYSRHIRNTGTGHSFHQKYWNENAAFAKPGR 112 I Y+ +RN G GH H +W AA K G+ Sbjct: 83 ISKYNTAVRNNGGGHFNHTFFWESLAATNKTGQ 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,337,958 Number of Sequences: 219361 Number of extensions: 387067 Number of successful extensions: 1247 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1247 length of database: 80,573,946 effective HSP length: 30 effective length of database: 73,993,116 effective search space used: 1775834784 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)