>gb|AY111424.1| Zea mays CL11575_1 mRNA sequence
          Length = 1135

 Score =  115 bits (58), Expect = 1e-22
 Identities = 106/122 (86%)
 Strand = Plus / Plus

                                                                       
Query: 315 cctagtcattgtgttgaaaaccaggaagaagcgacgcgacgaaccctacaacgaccagct 374
           ||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 249 cctagtcattgtgctgaaaaccaggaagaagcgatgcgacaaaccctacaacaaccagct 308

                                                                       
Query: 375 ggacctctttcaagatgccgccgagccagctgcgccggtttgcttctccctccgcccctt 434
           |||||||||| ||||  || || |||||| ||||||| ||  ||||| |||| ||| |||
Sbjct: 309 ggacctcttttaagacacctccaagccagttgcgccgattgccttctacctctgcctctt 368

             
Query: 435 gc 436
           ||
Sbjct: 369 gc 370

>gb|BT017095.1| Zea mays clone EL01N0361E12.c mRNA sequence
          Length = 863

 Score =  101 bits (51), Expect = 2e-18
 Identities = 69/75 (92%)
 Strand = Plus / Minus

                                                                       
Query: 315 cctagtcattgtgttgaaaaccaggaagaagcgacgcgacgaaccctacaacgaccagct 374
           ||||||||||||| |||||||||||||||||||| || || ||||||||||| |||||||
Sbjct: 443 cctagtcattgtgctgaaaaccaggaagaagcgatgcaacaaaccctacaacaaccagct 384

                          
Query: 375 ggacctctttcaaga 389
           ||| |||||||||||
Sbjct: 383 ggatctctttcaaga 369

>ref|XM_473813.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 837

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                       
Query: 316 ctagtcattgtgttgaaaaccaggaagaagcgacgcgacgaaccctacaacgaccagctg 375
           |||||||||||| ||||| ||||| ||||| || || || ||||||||||| | ||  ||
Sbjct: 837 ctagtcattgtgctgaaagccagggagaagtgatgcaacaaaccctacaacaatcaattg 778

                                                                       
Query: 376 gacctctttcaagatgccgccgagccagctgcgccggtttgcttctccctccgccccttg 435
           ||||||||| |||| ||| || |||||  |||||| |||  ||||||| ||  |  ||||
Sbjct: 777 gacctctttaaagacgcctccaagccaattgcgcctgttcccttctccatcgacttcttg 718

                                                 
Query: 436 ctggttctcatcgcccgctgctgcccctggttcctggt 473
           |||||||||||   | ||||||||||||||||||||||
Sbjct: 717 ctggttctcattagcagctgctgcccctggttcctggt 680

>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
              complete sequence
          Length = 152732

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                          
Query: 316    ctagtcattgtgttgaaaaccaggaagaagcgacgcgacgaaccctacaacgaccagctg 375
              |||||||||||| ||||| ||||| ||||| || || || ||||||||||| | ||  ||
Sbjct: 122615 ctagtcattgtgctgaaagccagggagaagtgatgcaacaaaccctacaacaatcaattg 122556

                                                                          
Query: 376    gacctctttcaagatgccgccgagccagctgcgccggtttgcttctccctccgccccttg 435
              ||||||||| |||| ||| || |||||  |||||| |||  ||||||| ||  |  ||||
Sbjct: 122555 gacctctttaaagacgcctccaagccaattgcgcctgttcccttctccatcgacttcttg 122496

                                                    
Query: 436    ctggttctcatcgcccgctgctgcccctggttcctggt 473
              |||||||||||   | ||||||||||||||||||||||
Sbjct: 122495 ctggttctcattagcagctgctgcccctggttcctggt 122458

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                            
Query: 316      ctagtcattgtgttgaaaaccaggaagaagcgacgcgacgaaccctacaacgaccagctg 375
                |||||||||||| ||||| ||||| ||||| || || || ||||||||||| | ||  ||
Sbjct: 30718884 ctagtcattgtgctgaaagccagggagaagtgatgcaacaaaccctacaacaatcaattg 30718825

                                                                            
Query: 376      gacctctttcaagatgccgccgagccagctgcgccggtttgcttctccctccgccccttg 435
                ||||||||| |||| ||| || |||||  |||||| |||  ||||||| ||  |  ||||
Sbjct: 30718824 gacctctttaaagacgcctccaagccaattgcgcctgttcccttctccatcgacttcttg 30718765

                                                      
Query: 436      ctggttctcatcgcccgctgctgcccctggttcctggt 473
                |||||||||||   | ||||||||||||||||||||||
Sbjct: 30718764 ctggttctcattagcagctgctgcccctggttcctggt 30718727

>dbj|AK072824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134C17, full
           insert sequence
          Length = 1151

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                       
Query: 316 ctagtcattgtgttgaaaaccaggaagaagcgacgcgacgaaccctacaacgaccagctg 375
           |||||||||||| ||||| ||||| ||||| || || || ||||||||||| | ||  ||
Sbjct: 903 ctagtcattgtgctgaaagccagggagaagtgatgcaacaaaccctacaacaatcaattg 844

                                                                       
Query: 376 gacctctttcaagatgccgccgagccagctgcgccggtttgcttctccctccgccccttg 435
           ||||||||| |||| ||| || |||||  |||||| |||  ||||||| ||  |  ||||
Sbjct: 843 gacctctttaaagacgcctccaagccaattgcgcctgttcccttctccatcgacttcttg 784

                                                 
Query: 436 ctggttctcatcgcccgctgctgcccctggttcctggt 473
           |||||||||||   | ||||||||||||||||||||||
Sbjct: 783 ctggttctcattagcagctgctgcccctggttcctggt 746

>gb|AC147447.3| Gallus gallus BAC clone CH261-9P3 from chromosome unknown, complete
             sequence
          Length = 162933

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 110   agatgaaagatcaaagagaatt 131
             ||||||||||||||||||||||
Sbjct: 55914 agatgaaagatcaaagagaatt 55935

>gb|AC025794.9| Mus musculus chromosome 19, clone RP23-62O7, complete sequence
          Length = 242418

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 453    ctgctgcccctggttcctggt 473
              |||||||||||||||||||||
Sbjct: 197409 ctgctgcccctggttcctggt 197389

>ref|XM_763181.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_44_17461_18843)
            partial mRNA
          Length = 1383

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 112  atgaaagatcaaagagaatta 132
            |||||||||||||||||||||
Sbjct: 1004 atgaaagatcaaagagaatta 1024

>gb|AC124099.5| Mus musculus chromosome 3, clone RP24-125L17, complete sequence
          Length = 168471

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     acattttctttgagtgatga 58
              ||||||||||||||||||||
Sbjct: 134214 acattttctttgagtgatga 134195

>gb|BC076361.1| Danio rerio syntaxin1b, mRNA (cDNA clone MGC:92909 IMAGE:7119532),
            complete cds
          Length = 1656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 213  ttatttgaacccactttatatata 236
            ||||||||||||||||| ||||||
Sbjct: 1198 ttatttgaacccactttttatata 1175

>gb|AC005351.1| Homo sapiens chromosome 5, BAC clone 78c6 (LBNL H191), complete
             sequence
          Length = 47812

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   caaagagaattagagcactt 140
             ||||||||||||||||||||
Sbjct: 37792 caaagagaattagagcactt 37811

>gb|AY597770.1| Borrelia hermsii strain SIL variable tick protein (vtp) gene,
           partial cds
          Length = 645

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  tgttcaagaagttcatactt 101
           ||||||||||||||||||||
Sbjct: 171 tgttcaagaagttcatactt 190

>emb|BX009363.1|CNS08FDZ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA15AG12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 855

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  attacttacattttctttga 51
           ||||||||||||||||||||
Sbjct: 201 attacttacattttctttga 220

>gb|AY928180.1| Streptococcus agalactiae strain UCN36 transposon MtnLNU
            transposase-like (insLNU) and LnuC (lnu(C)) genes,
            complete cds
          Length = 1724

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  ctatgtcacaacaaacagtt 277
            ||||||||||||||||||||
Sbjct: 1722 ctatgtcacaacaaacagtt 1703

>gb|AC090049.17| Homo sapiens 12 BAC RP11-587P21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 105977

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   gaaagatcaaagagaattag 133
             ||||||||||||||||||||
Sbjct: 26592 gaaagatcaaagagaattag 26611

>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete
             sequence
          Length = 94884

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    catatcatagaaaaacgaat 33
             ||||||||||||||||||||
Sbjct: 68060 catatcatagaaaaacgaat 68041

>gb|AY701528.1| Campylobacter jejuni plasmid pCG8245, partial sequence
          Length = 25713

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   ctatgtcacaacaaacagtt 277
             ||||||||||||||||||||
Sbjct: 10850 ctatgtcacaacaaacagtt 10831

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      cagatgaaagatcaaagaga 128
                ||||||||||||||||||||
Sbjct: 21111263 cagatgaaagatcaaagaga 21111282

>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    caagatgccgccgagccagc 404
              ||||||||||||||||||||
Sbjct: 247531 caagatgccgccgagccagc 247512

>emb|BX649420.2| Zebrafish DNA sequence from clone CH211-139N7 in linkage group 20,
             complete sequence
          Length = 166858

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   ttatttgaacccactttata 232
             ||||||||||||||||||||
Sbjct: 88205 ttatttgaacccactttata 88224

>emb|BX649243.2| Zebrafish DNA sequence from clone CH211-127E19 in linkage group 20,
             complete sequence
          Length = 166766

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   ttatttgaacccactttata 232
             ||||||||||||||||||||
Sbjct: 78654 ttatttgaacccactttata 78635

>gb|AF183361.1|AF183361 Homo sapiens clone NIGMS NA10888 chromosome 22 paralogous sequence
           variant, genomic sequence
          Length = 428

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 ctgctgcccctggttcctgg 472
           ||||||||||||||||||||
Sbjct: 121 ctgctgcccctggttcctgg 140

>emb|BX072564.4| Zebrafish DNA sequence from clone DKEY-27B23 in linkage group 11,
              complete sequence
          Length = 205057

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    ttatttgaacccactttata 232
              ||||||||||||||||||||
Sbjct: 159223 ttatttgaacccactttata 159242

>gb|AC109281.5| Mus musculus chromosome 3, clone RP24-66E21, complete sequence
          Length = 222162

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    acattttctttgagtgatga 58
             ||||||||||||||||||||
Sbjct: 54005 acattttctttgagtgatga 53986

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      cagatgaaagatcaaagaga 128
                ||||||||||||||||||||
Sbjct: 21037472 cagatgaaagatcaaagaga 21037491

>emb|AL844521.15| Zebrafish DNA sequence from clone DKEY-155O15 in linkage group 19,
              complete sequence
          Length = 213269

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    tgaacccactttatatataa 237
              ||||||||||||||||||||
Sbjct: 153920 tgaacccactttatatataa 153939

>emb|AL713950.4|CNS07YPT Oryza sativa chromosome 12, . BAC OJ1004_F11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103307

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   cagatgaaagatcaaagaga 128
             ||||||||||||||||||||
Sbjct: 27751 cagatgaaagatcaaagaga 27770

>gb|AC145975.3| Gallus gallus BAC clone CH261-4H14 from chromosome unknown, complete
              sequence
          Length = 185379

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 193    aagcatatgcagcacaagtcttat 216
              |||||| |||||||||||||||||
Sbjct: 138003 aagcatctgcagcacaagtcttat 138026


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,528,619
Number of Sequences: 3902068
Number of extensions: 4528619
Number of successful extensions: 98219
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98094
Number of HSP's gapped (non-prelim): 121
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)