>CATS_RAT (Q02765) Cathepsin S precursor (EC 3.4.22.27)|
          Length = 330

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 37  YLVITNADYSAKFIYRGKDESSTRPSSNHTTPCFKYISKAFPDQ 168
           Y++ T+ D  A + Y+  DE       N    C +YI   F D+
Sbjct: 190 YIIDTSIDSEASYPYKAMDEKCLYDPKNRAATCSRYIELPFGDE 233

>VGLG_CHAV (P13180) Spike glycoprotein precursor|
          Length = 524

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +1

Query: 127 TPCFKYISKAFPDQTKF-WKPTRR 195
           TP + Y+S AFP+ TK  WKP  +
Sbjct: 17  TPLYSYLSIAFPENTKLDWKPVTK 40

>NGF_BOVIN (P13600) Beta-nerve growth factor precursor (Beta-NGF) (Fragment)|
          Length = 231

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 59  TIVPNLYIEERMRAPRDRAATTPHPALNTSQRLSLTKPSSGSLHEEFR 202
           T+ P L+ + R+R+PR   +T P P    +Q L      + S +   R
Sbjct: 61  TVDPKLFKKRRLRSPRVLFSTQPPPVAADTQDLDFEAGGASSFNRTHR 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,018,920
Number of Sequences: 219361
Number of extensions: 474350
Number of successful extensions: 1207
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)