ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart20a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC ... 45 1e-04
2GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (E... 45 1e-04
3K1267_MOUSE (Q80TG1) Protein KIAA1267 31 2.1
4GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.... 30 4.6
5GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC... 30 4.6
6GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.... 29 6.0
7GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.... 29 6.0
8GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.... 29 7.8

>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)|
           (Protein bronze-2)
          Length = 236

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = -1

Query: 492 LAPTEAARAEKVDXXXXXXXXXXXXXXXXLDGGRRPLFGGDSI-GFLDLAVGCNMFWMEA 316
           LAPT  ARA+  +                 +G R    GGD+  G LDLA+GC +  + A
Sbjct: 119 LAPTPGARAQAAEDTRAALSLLEEAFKDRSNG-RAFFSGGDAAPGLLDLALGCFLPALRA 177

Query: 315 LRRMFGVTFLDAGRTPLL 262
             R+ G++ +DA  TPLL
Sbjct: 178 CERLHGLSLIDASATPLL 195



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>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28|
           kDa cold-induced protein)
          Length = 236

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = -1

Query: 390 RPLFGGDSIGFLDLAVGCNMFWMEALRRMFGVTFLDAGRTPLL 262
           +P FGGD +GF+D+ +G  + W  A+ ++ G   +D  RTP L
Sbjct: 154 KPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPAL 196



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>K1267_MOUSE (Q80TG1) Protein KIAA1267|
          Length = 1036

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +3

Query: 27  SHQVLLHVPKHTSDSRLISTMSTTTWESTGPMQVAASSWQAGRRR 161
           S+    H P H+   R +ST S T+  ++   QVAAS+ Q  RRR
Sbjct: 741 SYLTATHHPPHSPLVRQLSTSSDTSTPTSSGSQVAASTSQPVRRR 785



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>GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PCNT103)
          Length = 223

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 390 RPLFGGDSIGFLDLAVGCNMFWMEALRRMFGVTFLDAGRTP 268
           +  F GD  GF D+A     FW+      +GV  + + + P
Sbjct: 139 KKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFP 179



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>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)|
           (Auxin-regulated protein parC)
          Length = 221

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -1

Query: 396 GRRPLFGGDSIGFLDLAV 343
           G RP FGG+S GF+D+A+
Sbjct: 142 GDRPYFGGESFGFVDIAL 159



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>GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PGNT1/PCNT110)
          Length = 223

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 390 RPLFGGDSIGFLDLAVGCNMFWMEALRRMFGVTFLDAGRTP 268
           +  F GD  GF D+A     FW+       GV  + + + P
Sbjct: 139 KKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFP 179



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>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat|
           shock protein 26A) (G2-4)
          Length = 225

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -1

Query: 390 RPLFGGDSIGFLDLAVGCNMFWMEALRRMFGVTFLDAGRTPLL 262
           +  FGG+  G +D+A     FW+   + + G+    + + P+L
Sbjct: 145 KKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPIL 187



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>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PCNT107)
          Length = 221

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 396 GRRPLFGGDSIGFLDLAVGCNMFWMEA 316
           G +P FGG+S GF+D+A+     W  A
Sbjct: 142 GDKPYFGGESFGFVDIALIGYYSWFYA 168


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,460,153
Number of Sequences: 219361
Number of extensions: 897197
Number of successful extensions: 3326
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3323
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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