Clone Name | rbart19h12 |
---|---|
Clone Library Name | barley_pub |
>CNGT1_ARATH (Q9FI99) Cytokinin-N-glucosyltransferase 1 (EC 2.4.1.-)| Length = 464 Score = 33.5 bits (75), Expect = 0.30 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 6/86 (6%) Frame = -1 Query: 476 DQQINSRFMGAVWGSGLDMK---DVCXXXXXXXXXXXXXXXXELRRSAQALAQQVRRDIA 306 DQ +N+RF+ VW G+ ++ + E+R + L +VRR + Sbjct: 379 DQFVNARFISEVWRVGIHLEGRIERREIERAVIRLMVESKGEEIRGRIKVLRDEVRRSVK 438 Query: 305 QGGSSAKEFKRLV---GFIIELSIST 237 QGGSS + LV IIE + T Sbjct: 439 QGGSSYRSLDELVDRISIIIEPLVPT 464
>CNGT2_ARATH (Q9FIA0) Cytokinin-N-glucosyltransferase 2 (EC 2.4.1.-)| Length = 450 Score = 33.1 bits (74), Expect = 0.39 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%) Frame = -1 Query: 476 DQQINSRFMGAVWGSGLDMK---DVCXXXXXXXXXXXXXXXXELRRSAQALAQQVRRDIA 306 DQ +NSRF+ +W G+ ++ + ++R + L +V + + Sbjct: 372 DQMLNSRFVSDIWKIGIHLEGRIEKKEIEKAVRVLMEESEGNKIRERMKVLKDEVEKSVK 431 Query: 305 QGGSSAKEFKRLVGFIIEL 249 QGGSS + + L I+ L Sbjct: 432 QGGSSFQSIETLANHILLL 450
>NDF1_XENLA (Q91616) Neurogenic differentiation factor 1 (NeuroD1)| Length = 352 Score = 31.6 bits (70), Expect = 1.1 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = +3 Query: 309 DVPSHLLRQCLSRSP*LDGLH----GLPHHPFHDGPLAHVFHVQPRAPDGAHEPTVD 467 D+ SH+ Q S S L G GLP P+ +HVFHV+P + A EP D Sbjct: 203 DIQSHM--QTASSSFPLQGYPYQSPGLPSPPYGTMDSSHVFHVKPHSYGAALEPFFD 257
>FPG_PHOPR (Q6LVN0) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 268 Score = 30.4 bits (67), Expect = 2.5 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = -1 Query: 311 IAQGGSSAKEFKRLVG----FIIELSISTRGSTPSP--DKE*GPAGIGTLLSMLLCESCQ 150 I QGG++ K+FK G F EL + +G P P D IG S + C CQ Sbjct: 209 IEQGGTTLKDFKNADGKPGYFAQELQVYGKGGKPCPRCDNPLSEMKIGQRAS-VFCSECQ 267 Query: 149 K 147 K Sbjct: 268 K 268
>CZOG_SORBI (Q6JAH0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215)| Length = 466 Score = 30.0 bits (66), Expect = 3.3 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -1 Query: 356 LRRSAQALAQQVRRDIAQGGSSAKEFKRLVGFI 258 +R+ A+ L + VR +A GG+S K+ +G+I Sbjct: 432 VRQRAKELGEAVRASVADGGNSRKDLDDFIGYI 464
>CZOG1_MAIZE (Q93XP7) Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215)| (cisZOG1) Length = 467 Score = 30.0 bits (66), Expect = 3.3 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -1 Query: 356 LRRSAQALAQQVRRDIAQGGSSAKEFKRLVGFI 258 +R+ A+ L + VR +A GG+S K+ +G+I Sbjct: 433 VRQRAKELGEAVRASVADGGNSRKDLDDFIGYI 465
>CZOG2_MAIZE (Q8RXA5) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215)| (cisZOG2) Length = 463 Score = 30.0 bits (66), Expect = 3.3 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -1 Query: 356 LRRSAQALAQQVRRDIAQGGSSAKEFKRLVGFI 258 +R+ A+ L + VR +A GG+S K+ +G+I Sbjct: 429 VRQRAKELGEAVRASVADGGNSRKDLDDFIGYI 461
>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor| Length = 3063 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/36 (50%), Positives = 19/36 (52%) Frame = -2 Query: 457 GSWAPSGARGWT*KTCARGPSWNGW*GRPWSPSS*G 350 G P G RG+T K A GP G GRP SP S G Sbjct: 2833 GPMGPPGDRGFTGKDSAMGP--RGPPGRPGSPGSPG 2866
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 28.9 bits (63), Expect = 7.3 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +3 Query: 363 GLHGLPHHPFHDGPLAHVFHVQPRAPDGAHEP 458 G G+P P DGPL H H P GA P Sbjct: 668 GNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGP 699
>CRIM1_MOUSE (Q9JLL0) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)| (Fragment) Length = 1028 Score = 28.9 bits (63), Expect = 7.3 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +1 Query: 52 KHRSELSRCNVVSHGFSSNKC-HFKLALSCPSAFWQDSHSNIDNK---VPMPAGPYSLSG 219 KH ++ RC KC + CP F QDSH + K VP AGP LSG Sbjct: 547 KHGCDICRCK---------KCPELPCSKICPLGFQQDSHGCLICKCREVPPSAGPPVLSG 597
>FPG_MANSM (Q65R59) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 269 Score = 28.5 bits (62), Expect = 9.6 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 12/77 (15%) Frame = -1 Query: 341 QALAQQVRRDIAQGGSSAKEFKRLVG----FIIELSISTRGSTPSPDKE*GPAGIGTLLS 174 + + Q+++R I QGG++ K+F + G F EL I + P P+ GT + Sbjct: 199 EKIKQELKRAIEQGGTTLKDFLQPDGRPGYFAQELQIYGKKGAPCPN-------CGTKIE 251 Query: 173 MLL--------CESCQK 147 L+ C CQK Sbjct: 252 SLVVAQRNSYFCPKCQK 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,976,113 Number of Sequences: 219361 Number of extensions: 1195721 Number of successful extensions: 3487 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3483 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)