Clone Name | rbart19h08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y1453_METKA (Q8TVD9) UPF0218 protein MK1453 | 30 | 2.3 | 2 | HM14_CAEEL (P20271) Homeobox protein ceh-14 | 29 | 6.8 |
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>Y1453_METKA (Q8TVD9) UPF0218 protein MK1453| Length = 191 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 456 VPVAGYVAEAMKQDIAAGYVSLLVKIDGRVKWKVGSWVSG 337 +P G VA + Q + + LL + G +WK SW+SG Sbjct: 143 LPGEGMVAARVTQHLKDSVLRLLTRFRGYDEWKSRSWISG 182
>HM14_CAEEL (P20271) Homeobox protein ceh-14| Length = 351 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 338 PETQLPTFHLTRPSILTSSDTYPAAMS 418 P T P H+T PS+LT++ + P ++S Sbjct: 303 PSTDPPPMHMTTPSVLTTNFSTPLSLS 329 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,833,109 Number of Sequences: 219361 Number of extensions: 656784 Number of successful extensions: 1665 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1629 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1665 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)