ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart19h08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107482.1| Zea mays PCO119066 mRNA sequence Length = 1052 Score = 204 bits (103), Expect = 2e-49 Identities = 151/167 (90%) Strand = Plus / Minus Query: 296 gcggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccg 355 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 729 gcggagagcacggcggggcagctgacgaagaggtggtagctgccggagacccagctgccg 670 Query: 356 accttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatg 415 ||||||||||||||||||||||| | ||||||| |||||| ||| | || ||||||| | Sbjct: 669 accttccacttgacgcggccgtccaccttgacctgcagcgcgacgaagcccgcggcgacg 610 Query: 416 tcctgcttcatggcctcggcgacgtatccggcgacgggcacggactc 462 |||||||||||||| ||||||||||| |||| |||||||||||||| Sbjct: 609 tcctgcttcatggcgtcggcgacgtaggcggcaacgggcacggactc 563
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Plus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 19974362 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 19974421 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 19974422 cttccacttgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 19974481 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 19974482 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 19974532 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 19974238 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 19974286
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Plus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 151963 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 152022 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 152023 cttccacttgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 152082 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 152083 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 152133 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 151839 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 151887
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Plus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 78483 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 78542 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 78543 cttccacttgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 78602 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 78603 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 78653 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 78359 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 78407
>dbj|AK109402.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G02, full insert sequence Length = 1071 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 683 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 624 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 623 cttccacttgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 564 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 563 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 513 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 807 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 759
>dbj|AK109400.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D03, full insert sequence Length = 1051 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 662 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 603 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 602 cttccacttgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 543 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 542 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 492 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 786 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 738
>dbj|AK104564.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D10, full insert sequence Length = 906 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 630 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 571 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 570 cttccacttgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 511 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 510 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 460 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 754 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 706
>dbj|AK065946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049G21, full insert sequence Length = 1007 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 631 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 572 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 571 cttccacttgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 512 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 511 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 461 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 755 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 707
>dbj|AK061396.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E05, full insert sequence Length = 1051 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 662 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 603 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 602 cttccacttgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 543 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 542 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 492 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 786 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 738
>dbj|AK060001.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G10, full insert sequence Length = 940 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 659 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 600 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 599 cttccacttgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 540 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 539 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 489 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 783 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 735
>dbj|AK104600.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G02, full insert sequence Length = 988 Score = 180 bits (91), Expect = 3e-42 Identities = 151/171 (88%) Strand = Plus / Minus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 662 ggcgagcatggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgac 603 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||| ||||||||||||||| ||| ||| |||||| |||||||||||||||| ||| Sbjct: 602 cttccacctgacgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtc 543 Query: 418 ctgcttcatggcctcggcgacgtatccggcgacgggcacggactccccgga 468 |||| | | || ||||||||| | || || ||||| |||||||| ||||| Sbjct: 542 ctgcctgagcgcgtcggcgacgaagcccgccacggggacggactcgccgga 492 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 201 cgacggtgcaccctgtcggctgcgtgaatttcagtgacgcgacggcgcc 249 ||||| |||||||||||||||||||||| | || |||||||||||||| Sbjct: 786 cgacgctgcaccctgtcggctgcgtgaacctgagcgacgcgacggcgcc 738
>ref|XM_472430.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 141 bits (71), Expect = 2e-30 Identities = 119/135 (88%) Strand = Plus / Minus Query: 295 ggcggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctccc 354 ||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 543 ggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgcc 484 Query: 355 gaccttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgat 414 |||||||||||||||||||||||| | |||||| ||||| |||||| || || ||||| Sbjct: 483 gaccttccacttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgat 424 Query: 415 gtcctgcttcatggc 429 ||||||| ||||||| Sbjct: 423 gtcctgcctcatggc 409
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 141 bits (71), Expect = 2e-30 Identities = 119/135 (88%) Strand = Plus / Plus Query: 295 ggcggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctccc 354 ||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 23102 ggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgcc 23161 Query: 355 gaccttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgat 414 |||||||||||||||||||||||| | |||||| ||||| |||||| || || ||||| Sbjct: 23162 gaccttccacttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgat 23221 Query: 415 gtcctgcttcatggc 429 ||||||| ||||||| Sbjct: 23222 gtcctgcctcatggc 23236
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 141 bits (71), Expect = 2e-30 Identities = 119/135 (88%) Strand = Plus / Plus Query: 295 ggcggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctccc 354 ||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 99396 ggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgcc 99455 Query: 355 gaccttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgat 414 |||||||||||||||||||||||| | |||||| ||||| |||||| || || ||||| Sbjct: 99456 gaccttccacttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgat 99515 Query: 415 gtcctgcttcatggc 429 ||||||| ||||||| Sbjct: 99516 gtcctgcctcatggc 99530
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 141 bits (71), Expect = 2e-30 Identities = 119/135 (88%) Strand = Plus / Plus Query: 295 ggcggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctccc 354 ||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 20588768 ggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgcc 20588827 Query: 355 gaccttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgat 414 |||||||||||||||||||||||| | |||||| ||||| |||||| || || ||||| Sbjct: 20588828 gaccttccacttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgat 20588887 Query: 415 gtcctgcttcatggc 429 ||||||| ||||||| Sbjct: 20588888 gtcctgcctcatggc 20588902 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 307 ggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttcca 363 |||||||||| ||||| |||||||||| |||||||| |||| | ||||||||||| Sbjct: 35046593 ggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 35046649
>dbj|AK068271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013139L19, full insert sequence Length = 1055 Score = 141 bits (71), Expect = 2e-30 Identities = 119/135 (88%) Strand = Plus / Minus Query: 295 ggcggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctccc 354 ||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 671 ggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgcc 612 Query: 355 gaccttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgat 414 |||||||||||||||||||||||| | |||||| ||||| |||||| || || ||||| Sbjct: 611 gaccttccacttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgat 552 Query: 415 gtcctgcttcatggc 429 ||||||| ||||||| Sbjct: 551 gtcctgcctcatggc 537
>gb|AY108115.1| Zea mays PCO094434 mRNA sequence Length = 1184 Score = 127 bits (64), Expect = 3e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 298 ggcgagcatggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgac 357 |||||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||| Sbjct: 751 ggcgagcagcgcggggcagttgacgaagaggtggtagctgcccgagacccagctgccgac 692 Query: 358 cttccacttgacgcggccgtcgatcttgaccagcagcgacacgtacccggcggcgatgtc 417 ||||||||||||||||||||| | | |||| | ||| |||||| || || ||||||| Sbjct: 691 cttccacttgacgcggccgtccaccctgacgtggagcagcacgtatcccgcctcgatgtc 632 Query: 418 ctgcttcatggc 429 |||||||||||| Sbjct: 631 ctgcttcatggc 620
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 5239 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 5180 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 5179 cggccgtcgatcttgacc 5162
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 1366 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 1425 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 1426 cggccgtcgatcttgacc 1443
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 2979160 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2979219 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 2979220 cggccgtcgatcttgacc 2979237
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 2721559 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2721618 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 2721619 cggccgtcgatcttgacc 2721636
>dbj|AK119781.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F02, full insert sequence Length = 990 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 711 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 652 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 651 cggccgtcgatcttgacc 634
>dbj|AK106091.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B08, full insert sequence Length = 1020 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 655 cggccgtcgatcttgacc 638
>dbj|AK104479.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F10, full insert sequence Length = 994 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 655 cggccgtcgatcttgacc 638
>dbj|AK104466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C09, full insert sequence Length = 1020 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 655 cggccgtcgatcttgacc 638
>dbj|AK104372.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E09, full insert sequence Length = 994 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 655 cggccgtcgatcttgacc 638
>dbj|AK104217.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C11, full insert sequence Length = 1020 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 655 cggccgtcgatcttgacc 638
>dbj|AK104185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D07, full insert sequence Length = 1021 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 618 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 559 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 558 cggccgtcgatcttgacc 541
>dbj|AK070481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048L05, full insert sequence Length = 1056 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 742 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 683 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 682 cggccgtcgatcttgacc 665
>dbj|AK070326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I16, full insert sequence Length = 1026 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 716 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 657 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 656 cggccgtcgatcttgacc 639
>dbj|AK061582.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H12, full insert sequence Length = 1034 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 631 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 572 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 571 cggccgtcgatcttgacc 554
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 2730590 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2730649 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 2730650 cggccgtcgatcttgacc 2730667
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 2979104 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2979163 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 2979164 cggccgtcgatcttgacc 2979181
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 311 gggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttccacttgacg 370 |||||| ||||||||||||||||| |||||||| |||||| |||||||||||| |||| Sbjct: 36942 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 36883 Query: 371 cggccgtcgatcttgacc 388 |||||||||||||||||| Sbjct: 36882 cggccgtcgatcttgacc 36865
>ref|XM_474420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 307 ggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttcca 363 |||||||||| ||||| |||||||||| |||||||| |||| | ||||||||||| Sbjct: 558 ggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 502
>dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J15, full insert sequence Length = 1420 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 307 ggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttcca 363 |||||||||| ||||| |||||||||| |||||||| |||| | ||||||||||| Sbjct: 971 ggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 915
>dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D16, full insert sequence Length = 1024 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 307 ggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttcca 363 |||||||||| ||||| |||||||||| |||||||| |||| | ||||||||||| Sbjct: 594 ggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 538
>dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B04, full insert sequence Length = 1027 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 307 ggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttcca 363 |||||||||| ||||| |||||||||| |||||||| |||| | ||||||||||| Sbjct: 597 ggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 541
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 307 ggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttcca 363 |||||||||| ||||| |||||||||| |||||||| |||| | ||||||||||| Sbjct: 1261 ggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 1317
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 307 ggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttcca 363 |||||||||| ||||| |||||||||| |||||||| |||| | ||||||||||| Sbjct: 78261 ggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 78317
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 307 ggcggggcagctgacgaagaggtggtagctgccggagacccagctcccgaccttcca 363 |||||||||| ||||| |||||||||| |||||||| |||| | ||||||||||| Sbjct: 105640 ggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 105696
>emb|AL445216.6| Human DNA sequence from clone RP11-204N9 on chromosome 13 Contains the 3' end of the PCDH17 gene for protocadherin 17 (PCH68 PCDH68), complete sequence Length = 99292 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 75 attactacaatatataaatagaaa 98 |||||||||||||||||||||||| Sbjct: 28983 attactacaatatataaatagaaa 29006
>gb|AC002981.1|AC002981 Homo sapiens Xp22 BAC GS279A12 (Genome Systems) complete sequence Length = 153568 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 409 ggcgatgtcctgcttcatggcct 431 ||||||||||||||||||||||| Sbjct: 26308 ggcgatgtcctgcttcatggcct 26330
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 gcggccgtcgatcttgaccagc 391 |||||||||||||||||||||| Sbjct: 3547909 gcggccgtcgatcttgaccagc 3547930 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 cgtacccggcggcgatgtcct 419 ||||||||||||||||||||| Sbjct: 2045261 cgtacccggcggcgatgtcct 2045241
>gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete sequence Length = 251762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tattactacaatatataaata 94 ||||||||||||||||||||| Sbjct: 178547 tattactacaatatataaata 178567
>gb|AF131866.2| Mus musculus chromosome X clone CT7-271B7 map qA7.1, complete sequence Length = 110310 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 caatatataaatagaaattgt 102 ||||||||||||||||||||| Sbjct: 61404 caatatataaatagaaattgt 61384
>gb|AF143772.2| Mycobacterium avium strain 2151 glycopeptidolipid biosynthesis and daunorubicin resistance gene clusters and insertion sequences IS1601, IS1245 and IS1348, complete sequence Length = 71286 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 gccgtcgatcttgaccagcag 393 ||||||||||||||||||||| Sbjct: 44166 gccgtcgatcttgaccagcag 44146
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 cgacggcgcccccggtgccgt 260 ||||||||||||||||||||| Sbjct: 243387 cgacggcgcccccggtgccgt 243407
>gb|AF448741.1| Calumma oshaughnessyi NADH dehydrogenase subunit 1 (ND1) gene, partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met genes, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; and cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial genes for mitochondrial products Length = 1757 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 acaacttatattactacaata 86 ||||||||||||||||||||| Sbjct: 1174 acaacttatattactacaata 1194
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccaccggggccggcggcgag 303 ||||||||||||||||||||| Sbjct: 2668303 gccaccggggccggcggcgag 2668283
>gb|AE005052.1| Halobacterium sp. NRC-1 section 83 of 170 of the complete genome Length = 10031 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 agcggcatgccaccggggccg 295 ||||||||||||||||||||| Sbjct: 9252 agcggcatgccaccggggccg 9232
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 gccgtcgatcttgaccagcag 393 ||||||||||||||||||||| Sbjct: 1309384 gccgtcgatcttgaccagcag 1309364
>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete sequence Length = 193219 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 caatatataaatagaaattgt 102 ||||||||||||||||||||| Sbjct: 81419 caatatataaatagaaattgt 81399
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 390 gcagcgacacgtacccggcggcgatgtcctgc 421 |||||||||||| |||||||||||| ||||| Sbjct: 3406205 gcagcgacacgtcgccggcggcgatggcctgc 3406174
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cccggcggcgatgtcctgct 422 |||||||||||||||||||| Sbjct: 1250514 cccggcggcgatgtcctgct 1250495
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 tcagtgacgcgacggcgccc 250 |||||||||||||||||||| Sbjct: 540838 tcagtgacgcgacggcgccc 540857
>gb|AC121924.3| Mus musculus BAC clone RP24-198P16 from chromosome 2, complete sequence Length = 177062 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 aatatataaatagaaattgtttag 106 |||||||||||| ||||||||||| Sbjct: 135793 aatatataaatacaaattgtttag 135770
>gb|AC151816.17| Medicago truncatula clone mth2-85j22, complete sequence Length = 91918 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ttatattactacaatatata 90 |||||||||||||||||||| Sbjct: 75083 ttatattactacaatatata 75064
>emb|AL590068.7| Human DNA sequence from clone RP11-253D19 on chromosome 10 Contains two novel genes, complete sequence Length = 71780 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ttatattactacaatatataaata 94 ||||||||||| |||||||||||| Sbjct: 58654 ttatattactataatatataaata 58677
>emb|BX294145.1| Pirellula sp. strain 1 complete genome; segment 13/24 Length = 300350 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 cccgagcggcatgccaccggggcc 294 ||||||| |||||||||||||||| Sbjct: 12556 cccgagcagcatgccaccggggcc 12533
>emb|AL031543.1|SPCC74 S.pombe chromosome III cosmid c74 Length = 35637 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 gagacatacaaaaattaaga 58 |||||||||||||||||||| Sbjct: 12729 gagacatacaaaaattaaga 12748
>gb|AC157645.8| Medicago truncatula clone mth2-70l21, complete sequence Length = 118562 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ttatattactacaatatata 90 |||||||||||||||||||| Sbjct: 22920 ttatattactacaatatata 22901
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 cggccgtcgatcttgaccag 390 |||||||||||||||||||| Sbjct: 402368 cggccgtcgatcttgaccag 402349
>dbj|AK087549.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130318F19 product:unclassifiable, full insert sequence Length = 3675 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 aatatataaatagaaattgtttag 106 |||||||||||| ||||||||||| Sbjct: 1819 aatatataaatacaaattgtttag 1842
>gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, complete sequence Length = 179974 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 agacatacaaaaattaagag 59 |||||||||||||||||||| Sbjct: 101491 agacatacaaaaattaagag 101510
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 cgtatccggcgacgggcacg 457 |||||||||||||||||||| Sbjct: 2389619 cgtatccggcgacgggcacg 2389638
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gatgtcctgcttcatggcct 431 |||||||||||||||||||| Sbjct: 8869124 gatgtcctgcttcatggcct 8869143
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 cggcatgccaccggggccggcggc 300 ||||||||||||| |||||||||| Sbjct: 6082923 cggcatgccaccgaggccggcggc 6082946
>gb|AC154698.2| Mus musculus BAC clone RP23-137A20 from 14, complete sequence Length = 197874 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 aatatataaatagaaattgt 102 |||||||||||||||||||| Sbjct: 132326 aatatataaatagaaattgt 132307
>emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 in linkage group 7, complete sequence Length = 192578 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 caatatataaatagaaattg 101 |||||||||||||||||||| Sbjct: 146143 caatatataaatagaaattg 146162
>emb|BX005071.4| Zebrafish DNA sequence from clone CH211-139O14 in linkage group 7, complete sequence Length = 174225 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 caatatataaatagaaattg 101 |||||||||||||||||||| Sbjct: 93788 caatatataaatagaaattg 93769
>emb|BX511234.7| Zebrafish DNA sequence from clone DKEY-96I8 in linkage group 10, complete sequence Length = 112069 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttatattactacaatatata 90 |||||||||||||||||||| Sbjct: 7623 ttatattactacaatatata 7642
>gb|AF076221.1|AF076221 Myxococcus xanthus SasN (sasN) gene, complete cds; and unknown genes Length = 4205 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 ggccggcggcgagcatggcg 310 |||||||||||||||||||| Sbjct: 2279 ggccggcggcgagcatggcg 2260
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cccggcggcgatgtcctgct 422 |||||||||||||||||||| Sbjct: 2577001 cccggcggcgatgtcctgct 2577020
>emb|AL929249.15| Mouse DNA sequence from clone RP23-273G23 on chromosome 2, complete sequence Length = 194209 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 aatatataaatagaaattgtttag 106 |||||||||||| ||||||||||| Sbjct: 92866 aatatataaatacaaattgtttag 92889
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aacgagacatacaaaaatta 55 |||||||||||||||||||| Sbjct: 1757224 aacgagacatacaaaaatta 1757243 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,116,307 Number of Sequences: 3902068 Number of extensions: 4116307 Number of successful extensions: 78905 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77831 Number of HSP's gapped (non-prelim): 1074 length of query: 468 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 446 effective length of database: 17,147,199,772 effective search space: 7647651098312 effective search space used: 7647651098312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
