ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart19g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 42 4e-04
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 41 7e-04
3CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 32 0.42
4CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 30 1.6
5CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 30 1.6
6RL3_UREPA (Q9PQR0) 50S ribosomal protein L3 29 2.7
7CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 29 2.7
8CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 29 3.6
9XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 29 3.6
10XKR6_TETNG (Q49LS8) XK-related protein 6 28 8.0
11HPUB_NEIMC (P96949) Hemoglobin-haptoglobin utilization protein B... 28 8.0
12HPUB_NEIMA (Q9JWA2) Hemoglobin-haptoglobin utilization protein B... 28 8.0

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = -3

Query: 269 VVQKAANYGGVMVWERYEAKRTNYSS 192
           V QK  NYGG+M+W+RY  K+TNYSS
Sbjct: 273 VAQKKDNYGGIMLWDRYFDKQTNYSS 298



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -3

Query: 266 VQKAANYGGVMVWERYEAKRTNYSSYAIQWA 174
           VQKA NYGG+M+W+R+  K+T Y      WA
Sbjct: 274 VQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 269 VVQKAANYGGVMVWERYEAKRTNYSS 192
           V++++  YGGVM+W +Y   ++ YSS
Sbjct: 270 VIKRSPKYGGVMLWSKYYDDQSGYSS 295



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 266 VQKAANYGGVMVWERYEAKRTNYSS 192
           ++K+  YGGVM+W ++   +  YSS
Sbjct: 269 IKKSPKYGGVMLWSKFYDDKNGYSS 293



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -3

Query: 266 VQKAANYGGVMVWERYEAKRTNYSS 192
           ++ +  YGGVM+W+R+   ++ YS+
Sbjct: 263 IKTSPKYGGVMIWDRFNDAQSGYSN 287



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>RL3_UREPA (Q9PQR0) 50S ribosomal protein L3|
          Length = 233

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +2

Query: 5   SQTSTEGSRFIIGYKAHNFTLGILIHWKGSKHMHMHMQYTDGYNKSTRGRSERRRV 172
           +Q  T+G  F    K HNF++G + H  G  H ++      G     RG S+ +RV
Sbjct: 106 AQAYTKGHGFTGSIKRHNFSMGPMGHGAGYPHRYV------GSIAKGRGGSQAQRV 155



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 266 VQKAANYGGVMVWERYEAKRTNYSSYAI 183
           ++ ++ YGGVM+W+R+   ++ YS   I
Sbjct: 268 IKGSSKYGGVMLWDRFNDGQSGYSGAII 295



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 266 VQKAANYGGVMVWERYEAKRTNYSS 192
           ++K+  YGGVM+W ++   +  YSS
Sbjct: 272 LKKSRKYGGVMLWSKFWDDKNGYSS 296



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 266 VQKAANYGGVMVWERYEAKRTNYS 195
           V+   NYGG+ +++RY  K+ NY+
Sbjct: 264 VRSLPNYGGLAIYDRYFDKKANYT 287



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>XKR6_TETNG (Q49LS8) XK-related protein 6|
          Length = 578

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 119 YTDGYNKSTRGRSERRRVKPIGWRNCCNLSAW 214
           YT G   S  G S RR    +    CC LS W
Sbjct: 143 YTGGGLGSVEGLSSRRAAASLQRDKCCRLSVW 174



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>HPUB_NEIMC (P96949) Hemoglobin-haptoglobin utilization protein B precursor|
          Length = 810

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 47  KAH-NFTLGILIHWKGSKHMHMHMQYTDGYNKST 145
           +AH  F+ G    W+ +KH+H+  +Y+ G+   T
Sbjct: 506 RAHAGFSYGTGFDWRFTKHLHLLAKYSTGFRAPT 539



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>HPUB_NEIMA (Q9JWA2) Hemoglobin-haptoglobin utilization protein B precursor|
          Length = 810

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 47  KAH-NFTLGILIHWKGSKHMHMHMQYTDGYNKST 145
           +AH  F+ G    W+ +KH+H+  +Y+ G+   T
Sbjct: 506 RAHAGFSYGTGFDWRFTKHLHLLAKYSTGFRAPT 539


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,578,273
Number of Sequences: 219361
Number of extensions: 771960
Number of successful extensions: 2165
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2163
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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