Clone Name | rbart19g12 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 42.0 bits (97), Expect = 4e-04 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = -3 Query: 269 VVQKAANYGGVMVWERYEAKRTNYSS 192 V QK NYGG+M+W+RY K+TNYSS Sbjct: 273 VAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 41.2 bits (95), Expect = 7e-04 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = -3 Query: 266 VQKAANYGGVMVWERYEAKRTNYSSYAIQWA 174 VQKA NYGG+M+W+R+ K+T Y WA Sbjct: 274 VQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 32.0 bits (71), Expect = 0.42 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -3 Query: 269 VVQKAANYGGVMVWERYEAKRTNYSS 192 V++++ YGGVM+W +Y ++ YSS Sbjct: 270 VIKRSPKYGGVMLWSKYYDDQSGYSS 295
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 30.0 bits (66), Expect = 1.6 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = -3 Query: 266 VQKAANYGGVMVWERYEAKRTNYSS 192 ++K+ YGGVM+W ++ + YSS Sbjct: 269 IKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 30.0 bits (66), Expect = 1.6 Identities = 9/25 (36%), Positives = 18/25 (72%) Frame = -3 Query: 266 VQKAANYGGVMVWERYEAKRTNYSS 192 ++ + YGGVM+W+R+ ++ YS+ Sbjct: 263 IKTSPKYGGVMIWDRFNDAQSGYSN 287
>RL3_UREPA (Q9PQR0) 50S ribosomal protein L3| Length = 233 Score = 29.3 bits (64), Expect = 2.7 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +2 Query: 5 SQTSTEGSRFIIGYKAHNFTLGILIHWKGSKHMHMHMQYTDGYNKSTRGRSERRRV 172 +Q T+G F K HNF++G + H G H ++ G RG S+ +RV Sbjct: 106 AQAYTKGHGFTGSIKRHNFSMGPMGHGAGYPHRYV------GSIAKGRGGSQAQRV 155
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 29.3 bits (64), Expect = 2.7 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = -3 Query: 266 VQKAANYGGVMVWERYEAKRTNYSSYAI 183 ++ ++ YGGVM+W+R+ ++ YS I Sbjct: 268 IKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = -3 Query: 266 VQKAANYGGVMVWERYEAKRTNYSS 192 ++K+ YGGVM+W ++ + YSS Sbjct: 272 LKKSRKYGGVMLWSKFWDDKNGYSS 296
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 266 VQKAANYGGVMVWERYEAKRTNYS 195 V+ NYGG+ +++RY K+ NY+ Sbjct: 264 VRSLPNYGGLAIYDRYFDKKANYT 287
>XKR6_TETNG (Q49LS8) XK-related protein 6| Length = 578 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = +2 Query: 119 YTDGYNKSTRGRSERRRVKPIGWRNCCNLSAW 214 YT G S G S RR + CC LS W Sbjct: 143 YTGGGLGSVEGLSSRRAAASLQRDKCCRLSVW 174
>HPUB_NEIMC (P96949) Hemoglobin-haptoglobin utilization protein B precursor| Length = 810 Score = 27.7 bits (60), Expect = 8.0 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +2 Query: 47 KAH-NFTLGILIHWKGSKHMHMHMQYTDGYNKST 145 +AH F+ G W+ +KH+H+ +Y+ G+ T Sbjct: 506 RAHAGFSYGTGFDWRFTKHLHLLAKYSTGFRAPT 539
>HPUB_NEIMA (Q9JWA2) Hemoglobin-haptoglobin utilization protein B precursor| Length = 810 Score = 27.7 bits (60), Expect = 8.0 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +2 Query: 47 KAH-NFTLGILIHWKGSKHMHMHMQYTDGYNKST 145 +AH F+ G W+ +KH+H+ +Y+ G+ T Sbjct: 506 RAHAGFSYGTGFDWRFTKHLHLLAKYSTGFRAPT 539 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,578,273 Number of Sequences: 219361 Number of extensions: 771960 Number of successful extensions: 2165 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2090 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2163 length of database: 80,573,946 effective HSP length: 65 effective length of database: 66,315,481 effective search space used: 1591571544 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)