Clone Name | rbart19g06 |
---|---|
Clone Library Name | barley_pub |
>Y2912_DESPS (Q6AJ39) UPF0316 protein DP2912| Length = 318 Score = 30.0 bits (66), Expect = 3.8 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +1 Query: 340 FEYRSVSLVSGMFMSRQIPMSVETRRMIPVIHARLSLTRYIAAIEA 477 FE S+ + +F+SR + +S T R I ++H R ++ ++ EA Sbjct: 37 FEPASLLYAAMVFLSRVVDVSFGTLRTISIVHGRTTMAFWLGFFEA 82
>HST6_CANAL (P53706) ATP-dependent permease HST6 (STE6 homolog)| Length = 1323 Score = 29.6 bits (65), Expect = 5.0 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 2 ISKWRIYSDTGFLLQQYSTIFDDINKITL 88 + KWRI T F+ +Y I DD N I L Sbjct: 554 VKKWRIGKTTIFITHEYKNILDDENVIIL 582
>KKCC2_MOUSE (Q8C078) Calcium/calmodulin-dependent protein kinase kinase 2 (EC| 2.7.11.17) (Calcium/calmodulin-dependent protein kinase kinase beta) (CaM-kinase kinase beta) (CaM-KK beta) (CaMKK beta) Length = 588 Score = 29.3 bits (64), Expect = 6.5 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +3 Query: 132 HTGSVSIQFSMNDPHSNNMFMLHR-VNSKPRLSVPTVKP 245 H V + ++DP+ ++++M+ VN P + VPT+KP Sbjct: 245 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 283
>KKCC2_HUMAN (Q96RR4) Calcium/calmodulin-dependent protein kinase kinase 2 (EC| 2.7.11.17) (Calcium/calmodulin-dependent protein kinase kinase beta) (CaM-kinase kinase beta) (CaM-KK beta) (CaMKK beta) Length = 588 Score = 29.3 bits (64), Expect = 6.5 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +3 Query: 132 HTGSVSIQFSMNDPHSNNMFMLHR-VNSKPRLSVPTVKP 245 H V + ++DP+ ++++M+ VN P + VPT+KP Sbjct: 245 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 283
>CLD13_MOUSE (Q9Z0S4) Claudin-13| Length = 211 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = -2 Query: 446 LSLAWITGIILLVSTLIGICLLMNMPLTRD 357 LSLAW + ++LL+ GI L +N+P+ RD Sbjct: 163 LSLAWTSSLLLLLG---GILLCVNIPVCRD 189
>KKCC2_RAT (O88831) Calcium/calmodulin-dependent protein kinase kinase 2 (EC| 2.7.11.17) (Calcium/calmodulin-dependent protein kinase kinase beta) (CaM-kinase kinase beta) (CaM-KK beta) (CaMKK beta) Length = 587 Score = 29.3 bits (64), Expect = 6.5 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +3 Query: 132 HTGSVSIQFSMNDPHSNNMFMLHR-VNSKPRLSVPTVKP 245 H V + ++DP+ ++++M+ VN P + VPT+KP Sbjct: 244 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 282
>AT10A_MOUSE (O54827) Probable phospholipid-transporting ATPase VA (EC 3.6.3.1)| (P-locus fat-associated ATPase) Length = 1508 Score = 29.3 bits (64), Expect = 6.5 Identities = 17/65 (26%), Positives = 27/65 (41%) Frame = +1 Query: 94 DYFYLFTEKQEKPIQAVSVYSSQ*MIHIATICLCYTG*TASPDSASLLLNPRVQRKNPSM 273 D F QE P+ +S S + +C T SPD + R + K+P Sbjct: 549 DRFLAIARHQEHPLAHLSPELSDVFDFFIALTICNTVVVTSPDQPRQKVRVRFELKSPVK 608 Query: 274 TVKNF 288 T+++F Sbjct: 609 TIEDF 613
>US30_HCMVA (P09706) Hypothetical protein HHRF5| Length = 349 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 4/40 (10%) Frame = -2 Query: 497 ASRTNATASIAAIYLV----RLSLAWITGIILLVSTLIGI 390 A+RT++T S+ + ++V L++ W TGI+LL +G+ Sbjct: 209 ATRTSSTYSVLSAFVVWIGSGLNIIWWTGIVLLAVDALGL 248
>EXG_KLULA (Q12628) Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)| (Exo-1,3-beta-glucanase) Length = 429 Score = 28.9 bits (63), Expect = 8.5 Identities = 10/31 (32%), Positives = 19/31 (61%) Frame = -2 Query: 422 IILLVSTLIGICLLMNMPLTRDTLLYSNVKI 330 ++ L+S L+ +CL +PL++ Y N K+ Sbjct: 6 VVSLISLLVSVCLAQPLPLSKRYFEYENYKV 36
>FA5_PIG (Q9GLP1) Coagulation factor V precursor (Activated protein C| cofactor) [Contains: Coagulation factor V heavy chain; Coagulation factor V light chain] Length = 2258 Score = 28.9 bits (63), Expect = 8.5 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 8/77 (10%) Frame = +3 Query: 15 EFIQILAFCYNNTVQSSMILTKLHST*LFL------FIYGKAREAHTGSVSIQFSMNDPH 176 E I L FC+++TVQ + H L + FIYGK E ++ Sbjct: 594 ESIPTLGFCFDDTVQWHFCSVRTHDNILTIHFTGHSFIYGKRHEDTLTLFPMRGESVTVT 653 Query: 177 SNNM--FMLHRVNSKPR 221 +N+ +ML +NS PR Sbjct: 654 MDNVGTWMLTTMNSNPR 670 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,820,310 Number of Sequences: 219361 Number of extensions: 1390053 Number of successful extensions: 3265 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3265 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)