>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:|
           Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin
           2 low-kDa subunit]
          Length = 433

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
 Frame = -3

Query: 445 AKVAAVAPFELCYDSSKLSPTLSGYSVPQVDVMLE--GGTNFTVVGGNSMAQVNSGTACF 272
           A+V +VAPF LC++S+K++      + P VD++++   G  + + G + M Q   G  C 
Sbjct: 323 AQVKSVAPFGLCFNSNKIN------AYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCL 376

Query: 271 AFVQSGSTGATPAVVIGGFQMENKLVVLDNDKKTLSF-TPYLPARGFSCSN-FNFTRA 104
             V +G       V +G  Q+E KL+V D  +  + F T  L + G  C + FNF  A
Sbjct: 377 G-VMNGGMQPRAEVTLGTRQLEEKLMVFDLARSRVGFSTSSLHSHGVKCGDLFNFANA 433

>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic|
           7S globulin high-kDa subunit; Basic 7S globulin low-kDa
           subunit]
          Length = 427

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
 Frame = -3

Query: 445 AKVAAVAPFELCYDSSKLSPTLSGYSVPQVDVMLE--GGTNFTVVGGNSMAQVNSGTACF 272
           A+V +VAPF LC++S+K++      + P VD++++   G  + + G + M Q   G  C 
Sbjct: 317 AQVKSVAPFGLCFNSNKIN------AYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCL 370

Query: 271 AFVQSGSTGATPAVVIGGFQMENKLVVLDNDKKTLSF-TPYLPARGFSCSN-FNFTRA 104
             V +G       + +G  Q+E  LVV D  +  + F T  L + G  C++ FNF  A
Sbjct: 371 G-VMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADLFNFANA 427

>RGA_DROME (Q94547) Regulator of gene activity (Protein regena)|
          Length = 585

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
 Frame = -3

Query: 382 LSGYSVPQVDVMLEG------GTNFTVVGGNSMAQVNSGTACFAFVQSGSTGATPAVVIG 221
           L G   P   +++ G      G+N  VVGGN +  V SG    A    G  G++    +G
Sbjct: 254 LDGTEKPMNSIVVSGSASGSSGSNVGVVGGNGLGAVGSGIGGLAVGGGGGAGSSGGGGVG 313

Query: 220 G 218
           G
Sbjct: 314 G 314

>SYH_HAEIN (P43823) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 422

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
 Frame = -3

Query: 310 NSMAQVNSGTACFAFVQSGSTGATPAVVIGGFQMENKLVVLDN-----DKKTL 167
           N+M   +SG     F ++  +GAT A+VIG  +++NK VV+ +     D++TL
Sbjct: 357 NTMLHCSSGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTL 409

>PRM2_RAT (P11248) Protamine-2 (Protamine-P2) (Sperm histone P2)|
          Length = 104

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = +2

Query: 317 HHREVRPALQHHVHLRHGVARQRRRQLGRVVAQLERRHRRDLR 445
           HHR  R    H +H R    R+RRR   R      RRHRR  R
Sbjct: 48  HHRHRRCKRLHRIHKRRRSCRRRRRHSCR----HRRRHRRGCR 86

>PCBD_PROMT (Q46JW9) Divinyl chlorophyll a/b light-harvesting protein pcbD|
          Length = 370

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -3

Query: 358 VDVMLEGGTNFTVVGGNSMAQVNSGTACFAFVQSGSTGATPAVVIGGFQMENK 200
           +D+ +     F  +G +S+  V  G A  AF +   TGAT  +V G  Q ENK
Sbjct: 180 LDLTMIWNRQFDFIGIDSLEDVMGGHAFLAFAEL--TGATIHMVAGSTQWENK 230

>SYH_HAEI8 (Q4QNH3) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 423

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = -3

Query: 310 NSMAQVNSGTACFAFVQSGSTGATPAVVIGGFQMENKLVVLDN-----DKKTL 167
           N+M   + G     F ++  +GAT A+VIG  +++NK VV+ +     D++TL
Sbjct: 358 NTMLHCSGGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTL 410

>KREM2_MOUSE (Q8K1S7) Kremen protein 2 precursor (Kringle-containing protein|
           marking the eye and the nose) (Kringle domain-containing
           transmembrane protein 2) (Dickkopf receptor 2)
          Length = 461

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -3

Query: 412 CYDSSKLSPTLSGYSVPQVDVMLEGGTNFTVVGGNSMAQVNSGTACFAFVQSGSTGATPA 233
           C+  S   P LSG S     + ++    F  + G  +A V +G ACF   +S      PA
Sbjct: 126 CFVDSGAPPALSGPSGTSTKLTVQVCLRFCRMKGYQLAGVEAGYACFCGSESDLARGRPA 185

>RNPA_PROMI (P22835) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP|
           protein) (RNase P protein) (Protein C5)
          Length = 119

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 320 HREVRPALQHHVHLRHGVARQRRRQLGRVVAQLERRHRR 436
           H+   PA+   V +R GVA     QL  V+ +L RRH R
Sbjct: 76  HQHQLPAMDFVVLVRKGVAELDNHQLTEVLGKLWRRHCR 114

>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)|
          Length = 1518

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +2

Query: 299 RHGVSPHHREVRPALQHHVHLRHGVARQRRRQLGRVVAQLERRHRRDLRA 448
           RH +SPHH++  P LQHH   +    +Q+++Q      Q ++ H++  +A
Sbjct: 541 RH-LSPHHQQQSPLLQHHQQQQQ--QQQQQQQHLHQQQQQQQHHQQQPQA 587

>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +2

Query: 314 PHHREVRPALQHHVHLRHGVARQRRRQLGRVVAQLERRHRRDLRA 448
           PH R+ R    HH H R    R R R+     A  + R RR  RA
Sbjct: 324 PHSRKRRDTGAHHRHWRRRRRRVRHREGALPAAHPDDRRRRRRRA 368

>MDH_THETE (Q704B2) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 308

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 265 VQSGSTGATPAVVIGGFQMENKLVVLD 185
           V SG  GAT A ++G   ++NK+V++D
Sbjct: 5   VGSGRVGATTAAMLGVLGVDNKIVLID 31

>SP1_MOUSE (O89090) Transcription factor Sp1|
          Length = 784

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 319 VGGNSMAQVNSGTACFAFVQSGSTGATPAVVIGGFQ 212
           VGGN+    N G A F+  +S STG++ +   GG Q
Sbjct: 21  VGGNNGGSGNGGGAAFSQTRSSSTGSSSSSGGGGGQ 56

>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)|
          Length = 644

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 293 HLRHGVSPHHREVRPALQHHVHLRHGVARQRRRQ 394
           H +H     H       QHH+HL H  A+Q+  Q
Sbjct: 26  HQQHAQQQQHHLHMQQAQHHLHLSHQQAQQQHMQ 59

>SP1_RAT (Q01714) Transcription factor Sp1|
          Length = 786

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 319 VGGNSMAQVNSGTACFAFVQSGSTGATPAVVIGGFQ 212
           VGGN+    N G A F+  +S STG++ +   GG Q
Sbjct: 20  VGGNNGGSGNGGGAAFSQTRSSSTGSSSSSGGGGGQ 55

>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 296 LRHGVSPHHREVRPALQHHVHLRHGVARQRRRQ 394
           L H +S HH    PAL HH  L+H  + Q++ Q
Sbjct: 22  LHHHLSHHHH---PALHHHPVLQHHYSLQQQHQ 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,949,020
Number of Sequences: 219361
Number of extensions: 975970
Number of successful extensions: 3550
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3541
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)