ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart19e06 |
|---|---|
| Clone Library Name | barley_pub |
>VATE_SPIOL (Q41396) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 229 Score = 79.3 bits (194), Expect = 2e-15 Identities = 39/50 (78%), Positives = 42/50 (84%) Frame = -3 Query: 393 SHDDKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLLVA 244 SH +HG C GGVVLASRDGKIVFENT+DARLEV FRKKLP+IRK L A Sbjct: 176 SHHKEHGLHCSGGVVLASRDGKIVFENTLDARLEVAFRKKLPQIRKQLFA 225
>VATE_CITUN (Q9MB46) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 230 Score = 76.6 bits (187), Expect = 1e-14 Identities = 37/49 (75%), Positives = 42/49 (85%) Frame = -3 Query: 390 HDDKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLLVA 244 H + HG C GGVV+ASRDGKIV ENT+DARL+VVFRKKLPEIRK LV+ Sbjct: 178 HHNAHGPSCSGGVVVASRDGKIVCENTLDARLDVVFRKKLPEIRKQLVS 226
>VATE_CITLI (Q9SWE7) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (CLVE-1) Length = 230 Score = 76.6 bits (187), Expect = 1e-14 Identities = 37/49 (75%), Positives = 42/49 (85%) Frame = -3 Query: 390 HDDKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLLVA 244 H + HG C GGVV+ASRDGKIV ENT+DARL+VVFRKKLPEIRK LV+ Sbjct: 178 HHNAHGPSCSGGVVVASRDGKIVCENTLDARLDVVFRKKLPEIRKQLVS 226
>VATE_GOSHI (O23948) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 237 Score = 75.5 bits (184), Expect = 3e-14 Identities = 35/47 (74%), Positives = 39/47 (82%) Frame = -3 Query: 390 HDDKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 H + HG C GGVV+ASRDGKIVFENT+DARL+V F KKLPEIRK L Sbjct: 185 HAEAHGPFCSGGVVIASRDGKIVFENTLDARLDVAFNKKLPEIRKWL 231
>VATE_MESCR (Q40272) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 226 Score = 73.9 bits (180), Expect = 8e-14 Identities = 36/47 (76%), Positives = 39/47 (82%) Frame = -3 Query: 384 DKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLLVA 244 D H C GGVV+ASRDGKIVFENT+DARLEV FRKKLP+IRK L A Sbjct: 179 DSHELSCSGGVVMASRDGKIVFENTLDARLEVAFRKKLPQIRKQLFA 225
>VATE_ARATH (Q39258) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 230 Score = 68.2 bits (165), Expect = 5e-12 Identities = 34/46 (73%), Positives = 37/46 (80%) Frame = -3 Query: 387 DDKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 +D HG C GGVVLASRDGKIV ENT+DARL+V FR KLP IRK L Sbjct: 179 NDPHGLHCSGGVVLASRDGKIVCENTLDARLDVAFRMKLPVIRKSL 224
>VATE_DICDI (O00780) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 233 Score = 46.6 bits (109), Expect = 1e-05 Identities = 21/48 (43%), Positives = 33/48 (68%) Frame = -3 Query: 384 DKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLLVAA 241 D +G C GGV+L++ +G+I+ +NT+D+RLE+ F + P IR L A Sbjct: 178 DYNGPTCCGGVILSALEGRIICKNTLDSRLEICFDQLTPVIRTQLYGA 225
>VATE_SCHPO (O13687) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 26 kDa subunit) Length = 227 Score = 43.5 bits (101), Expect = 1e-04 Identities = 22/37 (59%), Positives = 27/37 (72%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 GGVVL GKI +NT+ ARLE+V + LPEIR+LL Sbjct: 180 GGVVLVGLGGKIRVDNTLRARLEIVKEEALPEIRRLL 216
>VATE_MANSE (P31402) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 28 kDa subunit) Length = 226 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 GG+ L + G+I NT+++RLE++ ++ LPEIR L Sbjct: 179 GGIELIAAKGRIKISNTLESRLELIAQQLLPEIRNAL 215
>VATE_HETSC (Q9U1G5) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 226 Score = 35.8 bits (81), Expect = 0.025 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 GGV L ++DGKI +T++ARL+++ K P++R L Sbjct: 179 GGVELLAKDGKIRVSSTLEARLDLIADKITPQVRTAL 215
>VATE_MOUSE (P50518) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 31 kDa subunit) (P31) Length = 228 Score = 34.7 bits (78), Expect = 0.056 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLLVAA 241 GGV + + D KI NT+++RL+++ ++ +PE+R L A Sbjct: 181 GGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGA 220
>VATE_HUMAN (P36543) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 31 kDa subunit) (P31) Length = 226 Score = 34.7 bits (78), Expect = 0.056 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLLVAA 241 GGV + + D KI NT+++RL+++ ++ +PE+R L A Sbjct: 179 GGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGA 218
>VATE_DROME (P54611) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 28 kDa subunit) Length = 226 Score = 34.7 bits (78), Expect = 0.056 Identities = 15/37 (40%), Positives = 27/37 (72%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 GGV L + +G+I NT+++RL+++ ++ +PEIR L Sbjct: 179 GGVELLALNGRIKVPNTLESRLDLISQQLVPEIRNAL 215
>VATE_CANAL (O94072) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 226 Score = 34.7 bits (78), Expect = 0.056 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 2/47 (4%) Frame = -3 Query: 393 SHDDKH--GQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIR 259 S DDK+ + GG+V+ + GKI +NT++ RL+++ + LP IR Sbjct: 166 SIDDKNFLAKDIAGGIVVVNGSGKIEVDNTLEERLKILSEEALPAIR 212
>VATE_BOVIN (P11019) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 31 kDa subunit) (P31) Length = 226 Score = 34.7 bits (78), Expect = 0.056 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLLVAA 241 GGV + + D KI NT+++RL+++ ++ +PE+R L A Sbjct: 179 GGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGA 218
>VATE_NEUCR (Q01278) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 26 kDa subunit) Length = 230 Score = 34.3 bits (77), Expect = 0.074 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 GG+++ +GKI +NT +ARL ++ LP +RK L Sbjct: 183 GGIIIVGGNGKIDIDNTFEARLTLLKDSALPAMRKAL 219
>VATE_YEAST (P22203) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 27 kDa subunit) Length = 232 Score = 33.5 bits (75), Expect = 0.13 Identities = 16/45 (35%), Positives = 28/45 (62%) Frame = -3 Query: 393 SHDDKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIR 259 S+D + + GGVV+++ KI NT++ RL+++ + LP IR Sbjct: 174 SNDYLNKDLVSGGVVVSNASDKIEINNTLEERLKLLSEEALPAIR 218
>VATE_METAC (Q8TIJ4) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 183 Score = 32.7 bits (73), Expect = 0.21 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = -3 Query: 366 CHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 C GGVVL + DG + + T D+ L+ V+ + L +I +L Sbjct: 143 CIGGVVLENEDGTVRLDYTYDSILKNVYERSLKQISDIL 181
>VATE_METKA (Q8TWL9) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 200 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARL 295 GGV+ S+DG ++NTVDARL Sbjct: 161 GGVIAESKDGSEAYDNTVDARL 182
>VATE_ARCFU (O29104) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 188 Score = 31.2 bits (69), Expect = 0.62 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -3 Query: 366 CHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 C GGV+L G I T D + V+ +KL E+ KLL Sbjct: 148 CIGGVILEDPAGDIRLNLTFDELVSQVYEQKLSEVSKLL 186
>MTERF_HUMAN (Q99551) Transcription termination factor, mitochondrial precursor| (mTERF) (Mitochondrial transcription termination factor 1) Length = 399 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +1 Query: 274 FLAEDNFKPCINCILEHNLSISRSQHNTSMANLAV 378 FLAE F I+C++E N+SIS+ N + + ++ Sbjct: 322 FLAEKKFNDKIDCLMEENISISQIIENPRVLDSSI 356
>MTERF_PONPY (Q5R9U8) Transcription termination factor, mitochondrial precursor| (mTERF) (Mitochondrial transcription termination factor 1) Length = 398 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +1 Query: 274 FLAEDNFKPCINCILEHNLSISRSQHNTSMANLAV 378 FLAE F I+C++E N+SIS+ N + + ++ Sbjct: 321 FLAEKKFNDKIDCLMEENISISQIIENPRVLDSSI 355
>VATE_DEIRA (Q9RWH1) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 185 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 GGV + +R GK NT+ RLE V P+I +LL Sbjct: 147 GGVRVVARGGKSGVTNTLSGRLERVKADMAPQISRLL 183
>ATP9B_HUMAN (O43861) Probable phospholipid-transporting ATPase IIB (EC 3.6.3.1)| Length = 1095 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +3 Query: 267 LAISCGRQLQALHQLYSRTQSFHLEKPAQHLHGKSG 374 +A+SC +QL AL L+S + + +KP +H G Sbjct: 227 VAVSCTQQLPALGDLFSISAYVYAQKPQMDIHSFEG 262
>VATE_PYRAB (Q9UXU4) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 199 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLE 292 GGV++ + DG+I +NT +AR+E Sbjct: 160 GGVIVETEDGRIRIDNTFEARME 182
>VATE_PYRHO (O57724) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 198 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLE 292 GGV++ + DG+I +NT +AR+E Sbjct: 160 GGVIVETEDGRIRIDNTFEARME 182
>VATE_PYRFU (Q8U4A9) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 198 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVD---ARLEVVFRKKLPEI 262 GGV++ ++DG + +NT + ARLE R K+ EI Sbjct: 160 GGVIVETKDGNMRVDNTFEARMARLESELRSKIAEI 195
>TIE2_MOUSE (Q02858) Angiopoietin-1 receptor precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor TIE-2) (mTIE2) (Tyrosine-protein kinase receptor TEK) (p140 TEK) (Tunica interna endothelial cell kinase) (HYK) (STK1) (CD202b antigen) Length = 1122 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Frame = -2 Query: 292 SCLPQEIARDPKASCCGI--MRACILVMVQPFLCKMAAGLTPSRCTELCP 149 +C P R K C G ++ + + P+ C A G +C E CP Sbjct: 254 ACEPHTFGRTCKERCSGPEGCKSYVFCLPDPYGCSCATGWRGLQCNEACP 303
>RNPA_THET8 (Q7X5K6) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 163 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -3 Query: 357 GVVLASRDGKIVFENTVDARL-EVVFRKKLPEIRKLLVAA 241 G+V++ + GK V N V RL E++ R LP+ L+VA+ Sbjct: 98 GIVVSKKVGKAVVRNKVKRRLREILRRLHLPQAHLLVVAS 137
>RNPA_THET2 (Q72LI2) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 163 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -3 Query: 357 GVVLASRDGKIVFENTVDARL-EVVFRKKLPEIRKLLVAA 241 G+V++ + GK V N V RL E++ R LP+ L+VA+ Sbjct: 98 GIVVSKKVGKAVVRNKVKRRLREILRRLHLPQAHLLVVAS 137
>HUS2_SCHPO (Q09811) ATP-dependent DNA helicase hus2/rqh1 (EC 3.6.1.-)| Length = 1328 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = +2 Query: 140 SQNRAEFGAPAGGQTSSHFT*KRLYHHQNTSTHYAATRSFRISGNFLRKTTSSLASTVF 316 SQ+ + G+ +++S+ + Y H+ ST Y+ R + S RKT+ S A+T F Sbjct: 1261 SQSLTQTGSVPKRKSTSYTRPSKSYRHKRGSTSYSRKRKYSTSQKDSRKTSKS-ANTSF 1318
>HMDH_SCHMA (P16237) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC| 1.1.1.34) (HMG-CoA reductase) Length = 948 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Frame = +3 Query: 39 SSKQSSCKWFVLGNNNEQIGNVYIRG*NTLNNNVRKTGQS----SVHLLGVKP 185 S+ SC +NN+ I N+Y L++ + T S SVH L VKP Sbjct: 878 STNSHSCSHSTTTDNNDNISNIYDNHNVALSSKIPVTDNSDIRESVHSLHVKP 930
>DPO2_KLULA (P05468) DNA polymerase (EC 2.7.7.7) (Plasmid PGKL-2 protein 2)| Length = 994 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +1 Query: 226 YKHALCRNKKLSDLWQFLAEDNFKPCINCILEH 324 YK+ ++KK D FLA D K C+ +E+ Sbjct: 238 YKNVKSKSKKFKDFTLFLASDTSKNCVQQCVEY 270
>VATE_HALVO (Q48329) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 194 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 Query: 366 CHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEI 262 C GGVV+ + ++ NT D+ L+ V+ L E+ Sbjct: 152 CLGGVVVEGSNSRVRVNNTFDSVLDTVWEDNLKEV 186
>CR001_MOUSE (Q8BWJ4) Protein C18orf1 homolog| Length = 306 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 137 CSQN-RAEFGAPAGGQTSSHFT*KRLYHHQNTSTHYAATRSFR 262 CS N R E P + H+ +HHQ+++TH + F+ Sbjct: 242 CSSNGRMEGPPPTYSEVMGHYPGTSFFHHQHSNTHRGSRPQFQ 284
>RDRP_PVMR (P17965) RNA replication protein (147 kDa protein) (ORF 1 protein)| [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] Length = 1968 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -1 Query: 164 HRTLPGFANIVV*SILPSYVNITYLFIIVAEHK 66 H N ++ S+LPSY+N ++ F+ + E K Sbjct: 72 HPVCKTLENYILYSVLPSYINSSFYFVGIKERK 104
>ATG7_DEBHA (Q6BGV9) Autophagy-related protein 7 (Autophagy-related| E1-like-activating enzyme ATG7) Length = 652 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Frame = +1 Query: 196 YIETVVPSPKYKHALCRNKKLSDLWQFLAEDNFKPCINCI--LEHNLSISRSQHNTSMAN 369 Y ++ + +P YKH +K + D + L + K C+N + LE + + Q +A+ Sbjct: 574 YSQSKLQTPNYKHCSACSKYVIDKFNELGWEFVKNCLNDVTYLEETCGLLKVQQEADLAS 633 Query: 370 LAVL 381 +L Sbjct: 634 SELL 637
>ATKA_STAAC (Q5HEC3) Potassium-transporting ATPase A chain (EC 3.6.3.12)| (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 558 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 13/81 (16%) Frame = -2 Query: 244 GIMRACILVMVQPFLCKMAAGLTPS-----------RCTELCPVLRTLLFKVFYPLM*TL 98 G+M I V++ F+C + G TP +C L ++ +L VF L + Sbjct: 378 GLMNLLIFVLLTVFICSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILILVFSALAFMI 437 Query: 97 PIC--SLLLPSTNHLHELCFE 41 P S+ PS + + ++ +E Sbjct: 438 PGASESITNPSFHGISQVMYE 458
>ATKA1_STAAN (Q7A4G4) Potassium-transporting ATPase A chain 1 (EC 3.6.3.12)| (Potassium-translocating ATPase A chain 1) (ATP phosphohydrolase [potassium-transporting] A chain 1) (Potassium-binding and translocating subunit A 1) Length = 558 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 13/81 (16%) Frame = -2 Query: 244 GIMRACILVMVQPFLCKMAAGLTPS-----------RCTELCPVLRTLLFKVFYPLM*TL 98 G+M I V++ F+C + G TP +C L ++ +L VF L + Sbjct: 378 GLMNLLIFVLLTVFICSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILILVFSALAFMI 437 Query: 97 PIC--SLLLPSTNHLHELCFE 41 P S+ PS + + ++ +E Sbjct: 438 PGASESITNPSFHGISQVMYE 458
>ATKA1_STAAM (Q99SH9) Potassium-transporting ATPase A chain 1 (EC 3.6.3.12)| (Potassium-translocating ATPase A chain 1) (ATP phosphohydrolase [potassium-transporting] A chain 1) (Potassium-binding and translocating subunit A 1) Length = 558 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 13/81 (16%) Frame = -2 Query: 244 GIMRACILVMVQPFLCKMAAGLTPS-----------RCTELCPVLRTLLFKVFYPLM*TL 98 G+M I V++ F+C + G TP +C L ++ +L VF L + Sbjct: 378 GLMNLLIFVLLTVFICSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILILVFSALAFMI 437 Query: 97 PIC--SLLLPSTNHLHELCFE 41 P S+ PS + + ++ +E Sbjct: 438 PGASESITNPSFHGISQVMYE 458
>RNPA_THEBO (Q7X5L6) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 162 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -3 Query: 357 GVVLASRDGKIVFENTVDARL-EVVFRKKLPEIRKLLVAA 241 G+V++ + GK V N V RL E++ R LP+ L+VA+ Sbjct: 97 GIVVSKKVGKAVVRNKVKRRLREILRRLHLPKAHLLVVAS 136
>VATE_PYRKO (Q5JDS0) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 203 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLE 292 GGV++ S DG + +NT +AR+E Sbjct: 165 GGVLVESSDGSVRVDNTFEARIE 187
>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1475 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -3 Query: 363 HGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKLL 250 H G +L +DGK+ NT+ L F +P + K+L Sbjct: 170 HNGTLLTEKDGKLPVRNTMRVPL---FNNPVPSVMKML 204
>TGFR2_RAT (P38438) TGF-beta receptor type-2 precursor (EC 2.7.11.30)| (TGF-beta receptor type II) (TGFR-2) (TGF-beta type II receptor) Length = 567 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 12/98 (12%) Frame = +1 Query: 130 TTMFAKPGRVRCTCWGSNQQPFYIETVVPSPKYKH------------ALCRNKKLSDLWQ 273 T++ KP V W N + +ETV PK+ + + + KK + Sbjct: 74 TSICEKPQEVCVAVWRKNDKNITLETVCHDPKFTYHGFTLEDATSPTCVMKEKKRAGETF 133 Query: 274 FLAEDNFKPCINCILEHNLSISRSQHNTSMANLAVLII 387 F+ N + C + I I ++ TS +L ++II Sbjct: 134 FMCSCNTEECNDYI------IFNEEYTTSSPDLLLVII 165
>EGFR_CHICK (P13387) Epidermal growth factor receptor precursor (EC 2.7.10.1)| (CER) (Fragment) Length = 703 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = -2 Query: 364 PWRC--CAGFSRWKDCVREYS*CKA*SCLPQEIARDPKASCC 245 P+ C C FSR K+CV++ C P+E RD K C Sbjct: 527 PFHCFSCRFFSRQKECVKQ---CNILQGEPREFERDSKCLPC 565
>ATKA_STAAW (Q8NVI1) Potassium-transporting ATPase A chain (EC 3.6.3.12)| (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 558 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 13/81 (16%) Frame = -2 Query: 244 GIMRACILVMVQPFLCKMAAGLTPS-----------RCTELCPVLRTLLFKVFYPLM*TL 98 G+M I V++ F+C + G TP +C L ++ +L VF L + Sbjct: 378 GLMNLLIYVLLTVFICSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILILVFSALAFMI 437 Query: 97 PIC--SLLLPSTNHLHELCFE 41 P S+ PS + + ++ +E Sbjct: 438 PGASESITNPSFHGISQVMYE 458
>ATKA_STAAS (Q6G7N2) Potassium-transporting ATPase A chain (EC 3.6.3.12)| (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 558 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 13/81 (16%) Frame = -2 Query: 244 GIMRACILVMVQPFLCKMAAGLTPS-----------RCTELCPVLRTLLFKVFYPLM*TL 98 G+M I V++ F+C + G TP +C L ++ +L VF L + Sbjct: 378 GLMNLLIYVLLTVFICSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILILVFSALAFMI 437 Query: 97 PIC--SLLLPSTNHLHELCFE 41 P S+ PS + + ++ +E Sbjct: 438 PGASESITNPSFHGISQVMYE 458
>KRA24_HUMAN (Q9BYR9) Keratin-associated protein 2-4 (Keratin-associated protein| 2.4) (High sulfur keratin-associated protein 2.4) Length = 128 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/68 (26%), Positives = 24/68 (35%) Frame = -2 Query: 355 CCAGFSRWKDCVREYS*CKA*SCLPQEIARDPKASCCGIMRACILVMVQPFLCKMAAGLT 176 CC S + C C+ +C P CC C V VQ C+ G Sbjct: 63 CCDPCSLQEGC------CRPITCCPSSCTAVVCRPCCWATTCCQPVSVQSPCCRPPCG-Q 115 Query: 175 PSRCTELC 152 P+ C+ C Sbjct: 116 PTPCSTTC 123
>VATE_DESSY (O06501) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 203 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLE 292 GG+++ S DG + +NT D+R+E Sbjct: 165 GGILVESSDGTVRVDNTFDSRIE 187
>RNPA_OCEIH (Q8EKU0) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 121 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%) Frame = +3 Query: 18 RRCFIYYSSKQSSCKWFVLGNNNEQIGNVYIRG*NTLNNNVRKTGQSSVHLL--GVKPA- 188 R+ IYY K+ C + + + ++IGN +R N +++ + S H L +KPA Sbjct: 26 RQLVIYYREKEDQCHFRIGLSVGKKIGNAVMR------NRIKRCLRQSFHELEPDIKPAY 79 Query: 189 --AILHRN 206 I+ RN Sbjct: 80 DIVIIARN 87
>STLK_DROME (P83098) Putative serine/threonine-protein kinase STE20-like (EC| 2.7.11.1) Length = 346 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 Query: 6 INTIRRCFIYYSSKQSSCKWFVLGNNNEQIGNVYIRG 116 INTI CF+Y + K+ GN + NVY G Sbjct: 67 INTIVSCFLYKQYVYLTYKFMCFGNCEVLLKNVYTSG 103
>VATE_METTH (O27039) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 206 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVFRKKL-PEIRKLL 250 GG V+ + DG I NT++AR+ FRK L E+ ++L Sbjct: 168 GGAVVRTEDGLIEVNNTIEARMS-RFRKALRSEVARVL 204
>TROAP_HUMAN (Q12815) Trophinin-associated protein (Tastin) (Trophinin-assisting| protein) Length = 778 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -2 Query: 175 PSRCTELCPVLRTLLFKVFYPLM*TLPICSL 83 P C++ P +L+F +PL + PICSL Sbjct: 659 PPCCSQWAPATTSLIFSSQHPLCASPPICSL 689
>POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = +3 Query: 183 PAAILHRNGCTITKIQARIMPQQEAFGSLAISCGRQLQALHQLYSRTQSFHLEKPAQHLH 362 P A+L+R G + I + I P + G Q +A++ + ++HL P+ HL+ Sbjct: 849 PRAVLYR-GEGVDMISSAIQPLTKVDSITTFGFGHQNKAVYVAGYKICNYHLATPSDHLN 907 Query: 363 GKS 371 S Sbjct: 908 AIS 910
>RNPA_THESC (Q7X5K8) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 162 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -3 Query: 357 GVVLASRDGKIVFENTVDARL-EVVFRKKLPEIRKLLVAA 241 G+V++ + GK V N + RL E++ R LP+ L++A+ Sbjct: 97 GIVVSKKVGKAVVRNRIKRRLREILRRLHLPKAHLLVIAS 136
>ATKA1_STAAR (Q6GEZ6) Potassium-transporting ATPase A chain 1 (EC 3.6.3.12)| (Potassium-translocating ATPase A chain 1) (ATP phosphohydrolase [potassium-transporting] A chain 1) (Potassium-binding and translocating subunit A 1) Length = 558 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 13/81 (16%) Frame = -2 Query: 244 GIMRACILVMVQPFLCKMAAGLTPS-----------RCTELCPVLRTLLFKVFYPLM*TL 98 G+M I V++ F+C + G TP +C L ++ +L VF L + Sbjct: 378 GLMNLLIYVLLTLFICSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILILVFSALAFMI 437 Query: 97 PIC--SLLLPSTNHLHELCFE 41 P S+ PS + + ++ +E Sbjct: 438 PGASESITNPSFHGISQVMYE 458
>VATE_THEVO (Q97CQ3) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 185 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -3 Query: 363 HGGVVLASRDGKIVFENTVDARLEVVFRK 277 +GG++ +SRDGK+ + V + +E V K Sbjct: 146 YGGILASSRDGKVELDLRVSSIMEEVLEK 174
>ATP9B_MOUSE (P98195) Probable phospholipid-transporting ATPase IIB (EC 3.6.3.1)| Length = 1095 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +3 Query: 267 LAISCGRQLQALHQLYSRTQSFHLEKPAQHLHGKSG 374 +A+SC ++L AL L+S + + +KP +H G Sbjct: 227 VAVSCTQRLPALGDLFSISAYVYAQKPQLDIHSFEG 262
>Y1002_METJA (Q58408) Hypothetical protein MJ1002| Length = 309 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -3 Query: 360 GGVVLASRDGKIVFENTVDARLEVVF 283 GG+V +DGKIVFE D R ++F Sbjct: 284 GGIVRVFKDGKIVFE--TDPRANILF 307
>O10V1_HUMAN (Q8NGI7) Olfactory receptor 10V1| Length = 309 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/32 (40%), Positives = 22/32 (68%) Frame = -1 Query: 170 QVHRTLPGFANIVV*SILPSYVNITYLFIIVA 75 +VH+T + +V SI S ++I+Y+FI+VA Sbjct: 194 RVHKTALYIISFIVLSIPLSLISISYVFIVVA 225
>Y234_MYCPN (P75537) Hypothetical protein MPN234 (G07_orf417)| Length = 417 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = -1 Query: 347 WLLEMERLCSRIQLMQGLKLSSARNCQRSESFLL 246 WL + + + +++L+Q LK S RN R+ +FL+ Sbjct: 170 WLKQGKDVTKKVELIQALKSSFFRNQNRTFNFLI 203
>SYE_RHIME (P15189) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 485 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -1 Query: 383 ISTARFAMEVLCWLLEMERLCSRIQLMQGLKLSSAR 276 +S FA VL W ++ ER L +GLKLS R Sbjct: 332 LSEEEFAARVLAWAMDNER------LKEGLKLSQTR 361
>PAX4_RAT (O88436) Paired box protein Pax-4| Length = 349 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 21/78 (26%) Frame = -2 Query: 226 ILVMVQPFLCKMAAGLTPSRCT----------------ELCPVLRTLLFKVFYPLM*TLP 95 +L + P C++ G P RC+ L PV + + +P + T P Sbjct: 270 VLEQLNPSFCQLCWGAVPDRCSSDTTSQACLQPYWECHSLLPVASSSYMEFAWPCLTTHP 329 Query: 94 ICSLL-----LPSTNHLH 56 + L+ PST +LH Sbjct: 330 VHHLIGGPGQAPSTYYLH 347
>Y5204_STRCO (Q9FCI4) UPF0182 protein SCO5204| Length = 1000 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -3 Query: 351 VLASRDGKIVFENTVDARLEVVFRKKLPE 265 VL S G FENT+DA L VF + E Sbjct: 857 VLVSYGGNTAFENTLDAALNKVFGAQAAE 885
>LGAT1_MOUSE (Q91YX5) Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 (EC| 2.3.1.-) Length = 370 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = +1 Query: 193 FYIETVVPSPK-YKHALCRNKKLSDLWQFLAE 285 FY P P+ K A+CR LS++W FL + Sbjct: 317 FYKTGAFPPPQGQKEAVCREMTLSNMWIFLIQ 348 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,276,746 Number of Sequences: 219361 Number of extensions: 1336960 Number of successful extensions: 3818 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 3724 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3818 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
