ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart19e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Z33632.1|HVATPAX H.vulgare (Gerbel) mRNA for adenosine triph... 767 0.0
2gb|U84269.1|HVU84269 Hordeum vulgare vacuolar proton-translocati... 767 0.0
3gb|U84268.1|HVU84268 Hordeum vulgare vacuolar proton-translocati... 670 0.0
4gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E... 607 e-170
5gb|DQ272489.1| Triticum aestivum vacuolar proton ATPase subunit ... 307 1e-80
6ref|NM_192458.1| Oryza sativa (japonica cultivar-group), predic... 151 2e-33
7dbj|AK071200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
8gb|AY104382.1| Zea mays PCO079851 mRNA sequence 139 8e-30
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
10dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
11gb|BT018259.1| Zea mays clone EL01T0202A06.c mRNA sequence 80 6e-12
12emb|X96785.1|SOVHATP S.oleracea mRNA for vacuolar H(+)-ATPase 62 1e-06
13gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete se... 56 9e-05
14emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c1... 56 9e-05
15gb|AY220098.1| Phaseolus acutifolius vacuolar ATPase subunit E m... 54 4e-04
16gb|AF165939.1|AF165939 Citrus limon vacuolar V-H+ATPase subunit ... 52 0.001
17dbj|AB037106.1| Citrus unshiu Cit-VATP E-1 mRNA for vacuolar H+-... 52 0.001
18gb|AF282970.1|AF282970 Lycopersicon esculentum putative vacuolar... 50 0.005
19ref|NM_117185.3| Arabidopsis thaliana TUF (TUFF) AT4G11150 (TUF)... 48 0.022
20gb|AF499722.1| Thellungiella halophila vacuolar ATPase subunit E... 48 0.022
21gb|DQ124070.1| Coffea arabica clone MN-SSH4-F11 mRNA sequence 48 0.022
22emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, ... 48 0.022
23emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BA... 48 0.022
24gb|AY081632.1| Arabidopsis thaliana similar to vacuolar ATPases ... 48 0.022
25gb|AY065119.1| Arabidopsis thaliana similar to vacuolar ATPases ... 48 0.022
26emb|BX827529.1|CNS0A2RF Arabidopsis thaliana Full-length cDNA Co... 48 0.022
27emb|BX826893.1|CNS0A2D0 Arabidopsis thaliana Full-length cDNA Co... 48 0.022
28emb|X92118.1|MCVATPASE M.crystallinum mRNA for vacuolar proton A... 48 0.022
29emb|X92117.1|ATVATPASE A.thaliana mRNA for vacuolar proton ATPas... 48 0.022
30gb|AY106923.1| Zea mays PCO133385 mRNA sequence 48 0.022
31gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3 48 0.022
32gb|AF009338.1|AF009338 Gossypium hirsutum vacuolar H+-ATPase sub... 48 0.022
33ref|NM_105094.1| Arabidopsis thaliana VHA-E3; hydrogen-transport... 42 1.3
34ref|NM_188514.1| Oryza sativa (japonica cultivar-group), Ozsa818... 42 1.3
35gb|BT013542.1| Lycopersicon esculentum clone 132262F, mRNA sequence 42 1.3
36dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
37emb|AJ538752.1|NTA538752 Nicotiana tabacum cDNA-AFLP-fragment BC... 42 1.3
38dbj|AK072778.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
39gb|AC148868.3| Pan troglodytes BAC clone CH251-126E24 from Y, co... 40 5.3
40gb|AY338875.1| Genista tenera isolate BG11 CYCLOIDEA-like group ... 40 5.3
41gb|AC146578.2| Pan troglodytes BAC clone CH251-86G3 from Y, comp... 40 5.3
42gb|AC144459.8| Medicago truncatula clone mth2-23o13, complete se... 40 5.3
43gb|AY061695.1| Russula nigricans 217RUF24 18S ribosomal RNA gene... 40 5.3
44emb|AL139093.11| Human DNA sequence from clone RP11-440J4 on chr... 40 5.3
45emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chr... 40 5.3
46emb|AJ400587.1|ACO400587 Aphidius colemani partial mitochondrial... 40 5.3
47gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.3
48gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 5.3
49gb|AC149094.4| Pan troglodytes BAC clone CH251-268E10 from chrom... 40 5.3
50gb|AC148874.4| Pan troglodytes BAC clone CH251-429C12 from chrom... 40 5.3
51gb|AC156943.1| Pan troglodytes BAC clone CH251-607J5 from chromo... 40 5.3
52gb|BT004242.1| Arabidopsis thaliana clone RAFL15-22-H20 (R20661) 40 5.3
53dbj|AB076987.1| Cytisus racemosus CrCYC2 gene, partial cds 40 5.3
54emb|AM113962.1| Russula nigricans 18S rRNA gene (partial), ITS1,... 40 5.3
55gb|AC159650.5| Pan troglodytes BAC clone CH251-379D1 from chromo... 40 5.3
56emb|CT033765.2| Medicago truncatula chromosome 5 clone mth2-105d... 40 5.3 
>emb|Z33632.1|HVATPAX H.vulgare (Gerbel) mRNA for adenosine triphosphatase
          Length = 1034

 Score =  767 bits (387), Expect = 0.0
 Identities = 393/395 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    agttcataaacacaatccgacggtgctttatttattattcctcaaagcaaagttcgtgca 60
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1016 agttcataaacacaatccgacggtgctttatttattattcctcagagcaaagttcgtgca 957

                                                                        
Query: 61   aatggtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagagggtaga 120
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  aatagtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagagggtaga 897

                                                                        
Query: 121  atactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896  atactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtca 837

                                                                        
Query: 181  aaccagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcatta 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  aaccagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcatta 777

                                                                        
Query: 241  tgccgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagcct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  tgccgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagcct 717

                                                                        
Query: 301  tgcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  tgcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcc 657

                                               
Query: 361  atggcaaatctggccgtgcttatcatcatggctcg 395
            |||||||||||||||||||||||||||||||||||
Sbjct: 656  atggcaaatctggccgtgcttatcatcatggctcg 622
to top
>gb|U84269.1|HVU84269 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp)
            mRNA, complete cds
          Length = 1057

 Score =  767 bits (387), Expect = 0.0
 Identities = 393/395 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    agttcataaacacaatccgacggtgctttatttattattcctcaaagcaaagttcgtgca 60
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1056 agttcataaacacaatccgacggtgctttatttattattcctcagagcaaagttcgtgca 997

                                                                        
Query: 61   aatggtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagagggtaga 120
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996  aatagtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagagggtaga 937

                                                                        
Query: 121  atactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936  atactttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtca 877

                                                                        
Query: 181  aaccagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcatta 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876  aaccagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcatta 817

                                                                        
Query: 241  tgccgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagcct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816  tgccgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagcct 757

                                                                        
Query: 301  tgcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756  tgcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcc 697

                                               
Query: 361  atggcaaatctggccgtgcttatcatcatggctcg 395
            |||||||||||||||||||||||||||||||||||
Sbjct: 696  atggcaaatctggccgtgcttatcatcatggctcg 662
to top
>gb|U84268.1|HVU84268 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp)
            mRNA, complete cds
          Length = 1012

 Score =  670 bits (338), Expect = 0.0
 Identities = 347/350 (99%)
 Strand = Plus / Minus

                                                                        
Query: 46   agcaaagttcgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 105
            |||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 agcaaagttcctgcagatagtttgtgctcggcaacaataatgaacaaataggtaatgttt 952

                                                                        
Query: 106  acataagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgc 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951  acataagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgc 892

                                                                        
Query: 166  acctgctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaa 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891  acctgctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaa 832

                                                                        
Query: 226  tacaagcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaa 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831  tacaagcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaa 772

                                                                        
Query: 286  gacaacttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagc 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771  gacaacttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagc 712

                                                              
Query: 346  cagcacaacacctccatggcaaatctggccgtgcttatcatcatggctcg 395
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711  cagcacaacacctccatggcaaatctggccgtgcttatcatcatggctcg 662
to top
>gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E (VATE) mRNA,
            complete cds
          Length = 1970

 Score =  607 bits (306), Expect = e-170
 Identities = 370/390 (94%), Gaps = 1/390 (0%)
 Strand = Plus / Minus

                                                                        
Query: 7    taaacacaatccgacggtgctttatttattattcctcaaagcaaagttcgtgcaaatggt 66
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 1060 taaacacaatccgacggtgctttatttattattcctcagagcaaagttcgtgcaaatagt 1001

                                                                        
Query: 67   ttgtgctcggcaacaataatgaacaaataggtaatgtttacataagagggtagaatactt 126
            ||||||||||| || |||||||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 1000 ttgtgctcggcgacgataatgaacaaataggtagtgtttacataagaggatggaatactt 941

                                                                        
Query: 127  taaacaa-caatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtcaaacca 185
            ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 940  taaacaatcaatgttcgcaaaaccgggcggagttcgttgcacctgctgggggtcaaacca 881

                                                                        
Query: 186  gcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcattatgccg 245
            ||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||||||
Sbjct: 880  gcagccattttacatagaaacagctgtaccatcaccaaaatacaagtgcgcattatgccg 821

                                                                        
Query: 246  caacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcat 305
            ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 820  caacaagaagcttccggatctctggcaatttcttgcggaaaacaacttcaagccttgcat 761

                                                                        
Query: 306  caactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatggc 365
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760  caactgtattctcaaacacaatctttccatctcgagaagccagcacaacacctccatggc 701

                                          
Query: 366  aaatctggccgtgcttatcatcatggctcg 395
            ||||||||||||||| |||  |||||||||
Sbjct: 700  aaatctggccgtgctcatcgccatggctcg 671
to top
>gb|DQ272489.1| Triticum aestivum vacuolar proton ATPase subunit E mRNA, complete
           cds
          Length = 742

 Score =  307 bits (155), Expect = 1e-80
 Identities = 176/183 (96%)
 Strand = Plus / Minus

                                                                       
Query: 213 accatcaccaaaatacaagcacgcattatgccgcaacaagaagctttcggatctctggca 272
           |||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 742 accatcaccaaaatacaagtgcgcattatgccgcaacaagaagcttccggatctctggca 683

                                                                       
Query: 273 atttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatctttc 332
           ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 682 atttcttgcggaaaacaacttcaagccttgcatcaactgtattctcaaacacaatctttc 623

                                                                       
Query: 333 catctcgagaagccagcacaacacctccatggcaaatctggccgtgcttatcatcatggc 392
           |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 622 catctcgagaagccagcacaacacctccatggcaaatctggccgtgctcatcaccatggc 563

              
Query: 393 tcg 395
           |||
Sbjct: 562 tcg 560
to top
>ref|NM_192458.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 693

 Score =  151 bits (76), Expect = 2e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                       
Query: 250 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 309
           ||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||| 
Sbjct: 672 aagaagcttccggatctccggtaatttcttgcggaagacaacttccagcctggcatcaag 613

                                                               
Query: 310 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
           ||| |||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgtgttctcacacacaatctttccatctcgagaagccagcacaacacctcca 561
to top
>dbj|AK071200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086K07, full
           insert sequence
          Length = 1134

 Score =  151 bits (76), Expect = 2e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                       
Query: 250 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 309
           ||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||| 
Sbjct: 872 aagaagcttccggatctccggtaatttcttgcggaagacaacttccagcctggcatcaag 813

                                                               
Query: 310 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
           ||| |||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tgtgttctcacacacaatctttccatctcgagaagccagcacaacacctcca 761



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 55   cgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 105
            ||||| ||| ||| ||||||||| | ||||||||||||||||||| |||||
Sbjct: 1073 cgtgcgaatagttggtgctcggcgataataatgaacaaataggtagtgttt 1023
to top
>gb|AY104382.1| Zea mays PCO079851 mRNA sequence
          Length = 1233

 Score =  139 bits (70), Expect = 8e-30
 Identities = 112/126 (88%)
 Strand = Plus / Minus

                                                                       
Query: 250 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 309
           ||||||||| |||||||||||||||||||||||||| |||||||| || ||||| |||| 
Sbjct: 862 aagaagcttccggatctctggcaatttcttgcggaaaacaacttctagtcttgcgtcaag 803

                                                                       
Query: 310 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatggcaaat 369
           |||| |||| ||||||||||||||||||||||||||||  |||| |||||||  ||||| 
Sbjct: 802 tgtactctcaaacacaatctttccatctcgagaagccaatacaatacctccagagcaaaa 743

                 
Query: 370 ctggcc 375
           ||||||
Sbjct: 742 ctggcc 737



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 72   ctcggcaacaataatgaacaaataggta 99
            |||||| |||||||||||| ||||||||
Sbjct: 1044 ctcggcgacaataatgaaccaataggta 1017
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                            
Query: 272      aatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatcttt 331
                ||||||||||||||||||||||| ||||| ||||||| ||| |||||  |||||||||||
Sbjct: 26809280 aatttcttgcggaagacaacttccagcctggcatcaagtgtgttctcacacacaatcttt 26809221

                                              
Query: 332      ccatctcgagaagccagcacaacacctcca 361
                ||||||||||||||||||||||||||||||
Sbjct: 26809220 ccatctcgagaagccagcacaacacctcca 26809191



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 55       cgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 105
                ||||| ||| ||| ||||||||| | ||||||||||||||||||| |||||
Sbjct: 26809716 cgtgcgaatagttggtgctcggcgataataatgaacaaataggtagtgttt 26809666



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 326     atctttccatctcgagaagccagcacaac 354
               |||||||||||||| ||||| ||||||||
Sbjct: 6699280 atctttccatctcgggaagctagcacaac 6699308
to top
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0684E06
          Length = 147004

 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                         
Query: 272   aatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatcttt 331
             ||||||||||||||||||||||| ||||| ||||||| ||| |||||  |||||||||||
Sbjct: 44929 aatttcttgcggaagacaacttccagcctggcatcaagtgtgttctcacacacaatcttt 44870

                                           
Query: 332   ccatctcgagaagccagcacaacacctcca 361
             ||||||||||||||||||||||||||||||
Sbjct: 44869 ccatctcgagaagccagcacaacacctcca 44840



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 55    cgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 105
             ||||| ||| ||| ||||||||| | ||||||||||||||||||| |||||
Sbjct: 45365 cgtgcgaatagttggtgctcggcgataataatgaacaaataggtagtgttt 45315
to top
>gb|BT018259.1| Zea mays clone EL01T0202A06.c mRNA sequence
          Length = 684

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 94/112 (83%)
 Strand = Plus / Minus

                                                                       
Query: 250 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 309
           ||||||||| |||||||||||||||||||||||||| |||||||| ||  | ||  ||| 
Sbjct: 539 aagaagcttccggatctctggcaatttcttgcggaaaacaacttccagtttggcgccaag 480

                                                               
Query: 310 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
            | | |||| ||| ||||||||||||||| ||||||||  |||| |||||||
Sbjct: 479 agcactctcaaacgcaatctttccatctctagaagccaagacaatacctcca 428
to top
>emb|X96785.1|SOVHATP S.oleracea mRNA for vacuolar H(+)-ATPase
          Length = 1030

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 299 cttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacct 358
           ||||||||||  || ||||| |||||||| || ||||||||||||||||| || ||||||
Sbjct: 713 cttgcatcaagagtgttctcaaacacaattttgccatctcgagaagccagaacgacacct 654

              
Query: 359 cca 361
           |||
Sbjct: 653 cca 651
to top
>gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete sequence
          Length = 124828

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 302  gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
            ||||||| |||||| || |||||||||||||||||  |||||||||  || |||||||||
Sbjct: 2080 gcatcaagtgtattttcaaacacaatctttccatcatgagaagccaataccacacctcca 2021
to top
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE
          Length = 136068

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 302   gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
             ||||||| |||||| || |||||||||||||||||  |||||||||  || |||||||||
Sbjct: 21066 gcatcaagtgtattttcaaacacaatctttccatcatgagaagccaataccacacctcca 21125
to top
>gb|AY220098.1| Phaseolus acutifolius vacuolar ATPase subunit E mRNA, partial cds
          Length = 931

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 321 acacaatctttccatctcgagaagccagcac 351
           |||||||||||||||| ||||||||||||||
Sbjct: 584 acacaatctttccatcacgagaagccagcac 554
to top
>gb|AF165939.1|AF165939 Citrus limon vacuolar V-H+ATPase subunit E mRNA, complete cds
          Length = 1057

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 86/106 (81%)
 Strand = Plus / Minus

                                                                       
Query: 255 gctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtat 314
           |||| |||||||| || | ||| || ||||| ||||| || | || ||||||||  ||||
Sbjct: 789 gcttccggatctcaggaagttttttacggaacacaacatccaaccgtgcatcaagggtat 730

                                                         
Query: 315 tctcgaacacaatctttccatctcgagaagccagcacaacacctcc 360
           ||||  | || ||||| |||||||||||||||| ||| ||||||||
Sbjct: 729 tctcacatactatcttcccatctcgagaagccaccacgacacctcc 684
to top
>dbj|AB037106.1| Citrus unshiu Cit-VATP E-1 mRNA for vacuolar H+-ATPase E subunit-1,
           complete cds
          Length = 990

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 86/106 (81%)
 Strand = Plus / Minus

                                                                       
Query: 255 gctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtat 314
           |||| |||||||| || | ||| || ||||| ||||| || | || ||||||||  ||||
Sbjct: 727 gcttccggatctcaggaagttttttacggaacacaacatccaaccgtgcatcaagggtat 668

                                                         
Query: 315 tctcgaacacaatctttccatctcgagaagccagcacaacacctcc 360
           ||||  | || ||||| |||||||||||||||| ||| ||||||||
Sbjct: 667 tctcacatactatcttcccatctcgagaagccaccacgacacctcc 622
to top
>gb|AF282970.1|AF282970 Lycopersicon esculentum putative vacuolar proton ATPase subunit E
           mRNA, partial cds
          Length = 844

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                       
Query: 260 cggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcg 319
           ||||||||||| | |||||| ||||| |||||||| |  || |||||||  || || || 
Sbjct: 685 cggatctctggtagtttcttacggaacacaacttccaatctggcatcaagagtgttttca 626

                                                    
Query: 320 aacacaatctttccatctcgagaagccagcacaacacctcc 360
            ||||||| || |||||||||||||||| ||| || |||||
Sbjct: 625 cacacaattttcccatctcgagaagccaacaccactcctcc 585
to top
>ref|NM_117185.3| Arabidopsis thaliana TUF (TUFF) AT4G11150 (TUF) mRNA, complete cds
          Length = 1057

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 302 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
           ||||||| ||| |||||| |||| || || ||||| |||||||| | |||||||||||||
Sbjct: 749 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 690
to top
>gb|AF499722.1| Thellungiella halophila vacuolar ATPase subunit E-like protein
           mRNA, complete cds
          Length = 1023

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 314 ttctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
           |||||| ||||||| || ||||| |||||||| | |||||||||||||
Sbjct: 690 ttctcgcacacaattttcccatcacgagaagctaacacaacacctcca 643
to top
>gb|DQ124070.1| Coffea arabica clone MN-SSH4-F11 mRNA sequence
          Length = 499

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                       
Query: 260 cggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcg 319
           ||||||||||| | ||| | |||||| ||||| || | ||| ||||| | ||| || || 
Sbjct: 46  cggatctctggaagtttttggcggaacacaacatccaacctagcatcgagtgtgttttca 105

                                       
Query: 320 aacacaatctttccatctcgagaagcca 347
            ||||||| |||||||||||||||||||
Sbjct: 106 cacacaatttttccatctcgagaagcca 133
to top
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31
          Length = 198301

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 302   gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
             ||||||| ||| |||||| |||| || || ||||| |||||||| | |||||||||||||
Sbjct: 45750 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 45691
to top
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project)
          Length = 108598

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 302   gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
             ||||||| ||| |||||| |||| || || ||||| |||||||| | |||||||||||||
Sbjct: 73283 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 73224
to top
>gb|AY081632.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA,
           complete cds
          Length = 876

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 302 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
           ||||||| ||| |||||| |||| || || ||||| |||||||| | |||||||||||||
Sbjct: 620 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 561
to top
>gb|AY065119.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA,
           complete cds
          Length = 1033

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 302 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
           ||||||| ||| |||||| |||| || || ||||| |||||||| | |||||||||||||
Sbjct: 749 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 690
to top
>emb|BX827529.1|CNS0A2RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS6ZG09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 770

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 302 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
           ||||||| ||| |||||| |||| || || ||||| |||||||| | |||||||||||||
Sbjct: 471 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 412
to top
>emb|BX826893.1|CNS0A2D0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB73ZB05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1010

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 302 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
           ||||||| ||| |||||| |||| || || ||||| |||||||| | |||||||||||||
Sbjct: 709 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 650
to top
>emb|X92118.1|MCVATPASE M.crystallinum mRNA for vacuolar proton ATPase subunit E
          Length = 1070

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 314 ttctcgaacacaatctttccatctcgagaagccagcacaacacc 357
           ||||| ||||||||||| ||||||| ||||||||  ||||||||
Sbjct: 680 ttctcaaacacaatcttgccatctctagaagccataacaacacc 637
to top
>emb|X92117.1|ATVATPASE A.thaliana mRNA for vacuolar proton ATPase subunit E
          Length = 949

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 302 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
           ||||||| ||| |||||| |||| || || ||||| |||||||| | |||||||||||||
Sbjct: 726 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 667
to top
>gb|AY106923.1| Zea mays PCO133385 mRNA sequence
          Length = 1211

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 323 acaatctttccatctcgagaagccagcacaac 354
           ||||||||||||||||| ||||| ||||||||
Sbjct: 805 acaatctttccatctcgggaagctagcacaac 774
to top
>gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3
          Length = 74406

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                         
Query: 302   gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 361
             ||||||| ||| |||||| |||| || || ||||| |||||||| | |||||||||||||
Sbjct: 20072 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 20131
to top
>gb|AF009338.1|AF009338 Gossypium hirsutum vacuolar H+-ATPase subunit E mRNA, complete cds
          Length = 989

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 311 gtattctcgaacacaatctttccatctcgaga 342
           |||||||| |||||||| ||||||||||||||
Sbjct: 655 gtattctcaaacacaatttttccatctcgaga 624
to top
>ref|NM_105094.1| Arabidopsis thaliana VHA-E3; hydrogen-transporting ATP synthase,
           rotational mechanism / hydrogen-transporting ATPase,
           rotational mechanism AT1G64200 (VHA-E3) mRNA, complete
           cds
          Length = 714

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 256 ctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaa 308
           ||||||||||||||| | ||| ||||||||| |||| || | ||| |||||||
Sbjct: 684 ctttcggatctctggaagtttattgcggaaggcaacctccaacctcgcatcaa 632
to top
>ref|NM_188514.1| Oryza sativa (japonica cultivar-group), Ozsa8183 predicted mRNA
          Length = 693

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 326 atctttccatctcgagaagccagcacaac 354
           |||||||||||||| ||||| ||||||||
Sbjct: 596 atctttccatctcgggaagctagcacaac 568
to top
>gb|BT013542.1| Lycopersicon esculentum clone 132262F, mRNA sequence
          Length = 936

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 321 acacaatctttccatctcgagaagccagcacaacacctcca 361
           ||||||| || ||||||||||||||||| || || ||||||
Sbjct: 686 acacaattttcccatctcgagaagccagtaccactcctcca 646
to top
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0443E05
          Length = 176935

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 326   atctttccatctcgagaagccagcacaac 354
             |||||||||||||| ||||| ||||||||
Sbjct: 51432 atctttccatctcgggaagctagcacaac 51460
to top
>emb|AJ538752.1|NTA538752 Nicotiana tabacum cDNA-AFLP-fragment BC43-M1-018
          Length = 354

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                       
Query: 263 atctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaac 322
           ||||| |||| ||| || ||||| |||||||| |  || ||||||| ||| |||||  | 
Sbjct: 73  atctcgggcagttttttacggaacacaacttccaatctggcatcaagtgtgttctcacaa 132

                                    
Query: 323 acaatctttccatctcgagaagcca 347
           ||||| || ||||||||||||||||
Sbjct: 133 acaattttcccatctcgagaagcca 157
to top
>dbj|AK072778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139P14, full
           insert sequence
          Length = 1162

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 326 atctttccatctcgagaagccagcacaac 354
           |||||||||||||| ||||| ||||||||
Sbjct: 720 atctttccatctcgggaagctagcacaac 692
to top
>gb|AC148868.3| Pan troglodytes BAC clone CH251-126E24 from Y, complete sequence
          Length = 170533

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   gaacacaatctttccatctc 338
             ||||||||||||||||||||
Sbjct: 59200 gaacacaatctttccatctc 59181
to top
>gb|AY338875.1| Genista tenera isolate BG11 CYCLOIDEA-like group 1B protein gene,
           partial cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  caataatgaacaaataggta 99
           ||||||||||||||||||||
Sbjct: 599 caataatgaacaaataggta 618
to top
>gb|AC146578.2| Pan troglodytes BAC clone CH251-86G3 from Y, complete sequence
          Length = 188850

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   gaacacaatctttccatctc 338
             ||||||||||||||||||||
Sbjct: 21831 gaacacaatctttccatctc 21812
to top
>gb|AC144459.8| Medicago truncatula clone mth2-23o13, complete sequence
          Length = 114098

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   ttaaacaacaatgttcgcaa 145
             ||||||||||||||||||||
Sbjct: 79709 ttaaacaacaatgttcgcaa 79690
to top
>gb|AY061695.1| Russula nigricans 217RUF24 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence; and 28S large subunit ribosomal RNA gene,
           partial sequence
          Length = 693

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 aagccagcacaacacctcca 361
           ||||||||||||||||||||
Sbjct: 483 aagccagcacaacacctcca 464
to top
>emb|AL139093.11| Human DNA sequence from clone RP11-440J4 on chromosome 6 Contains a
             serine palmitoyltransferase long chain base subunit 1
             (SPTLC1) pseudogene, complete sequence
          Length = 131995

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 108   ataagagggtagaatactttaaacaaca 135
             |||||||| ||||| |||||||||||||
Sbjct: 39388 ataagaggatagaaaactttaaacaaca 39361
to top
>emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chromosome 9p21.2-23
             Contains the 3' end of a novel gene (FLJ20276), the 5' end
             of the SH3GL2 gene for SH3-domain GRB2-like 2 (CNSA2,
             SH3P4, EEN-B1, SH3D2A), a poly(A)-binding protein
             pseudogene and a CpG Island, complete sequence
          Length = 154621

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 315   tctcgaacacaatctttccatctc 338
             |||||| |||||||||||||||||
Sbjct: 19861 tctcgagcacaatctttccatctc 19884
to top
>emb|AJ400587.1|ACO400587 Aphidius colemani partial mitochondrial ATPase 6 gene for ATPase
          6 subunit
          Length = 624

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 tttatttattattcctcaaa 46
          ||||||||||||||||||||
Sbjct: 21 tttatttattattcctcaaa 40
to top
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
               sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 216     atcaccaaaatacaagcacg 235
               ||||||||||||||||||||
Sbjct: 1522379 atcaccaaaatacaagcacg 1522398
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 319      gaacacaatctttccatctc 338
                ||||||||||||||||||||
Sbjct: 13153408 gaacacaatctttccatctc 13153389



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 319     gaacacaatctttccatctc 338
               ||||||||||||||||||||
Sbjct: 4746066 gaacacaatctttccatctc 4746085



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 319     gaacacaatctttccatctc 338
               ||||||||||||||||||||
Sbjct: 1090748 gaacacaatctttccatctc 1090767
to top
>gb|AC149094.4| Pan troglodytes BAC clone CH251-268E10 from chromosome y, complete
              sequence
          Length = 175247

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    gaacacaatctttccatctc 338
              ||||||||||||||||||||
Sbjct: 116026 gaacacaatctttccatctc 116045
to top
>gb|AC148874.4| Pan troglodytes BAC clone CH251-429C12 from chromosome y, complete
             sequence
          Length = 168193

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   gaacacaatctttccatctc 338
             ||||||||||||||||||||
Sbjct: 19880 gaacacaatctttccatctc 19899
to top
>gb|AC156943.1| Pan troglodytes BAC clone CH251-607J5 from chromosome y, complete
             sequence
          Length = 193730

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   gaacacaatctttccatctc 338
             ||||||||||||||||||||
Sbjct: 11954 gaacacaatctttccatctc 11935
to top
>gb|BT004242.1| Arabidopsis thaliana clone RAFL15-22-H20 (R20661)
          Length = 1896

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 caatctttccatctcgagaa 343
           ||||||||||||||||||||
Sbjct: 755 caatctttccatctcgagaa 774
to top
>dbj|AB076987.1| Cytisus racemosus CrCYC2 gene, partial cds
          Length = 453

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  caataatgaacaaataggta 99
           ||||||||||||||||||||
Sbjct: 270 caataatgaacaaataggta 289
to top
>emb|AM113962.1| Russula nigricans 18S rRNA gene (partial), ITS1, 5.8S rRNA gene,
           ITS2 and 25S rRNA gene (partial), specimen voucher
           MC01-511
          Length = 629

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 aagccagcacaacacctcca 361
           ||||||||||||||||||||
Sbjct: 453 aagccagcacaacacctcca 434
to top
>gb|AC159650.5| Pan troglodytes BAC clone CH251-379D1 from chromosome y, complete
              sequence
          Length = 214370

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    gaacacaatctttccatctc 338
              ||||||||||||||||||||
Sbjct: 148386 gaacacaatctttccatctc 148367
to top
>emb|CT033765.2| Medicago truncatula chromosome 5 clone mth2-105d20, COMPLETE SEQUENCE
          Length = 131814

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    tttatttattattcctcaaagcaa 50
             ||||| ||||||||||||||||||
Sbjct: 92018 tttatatattattcctcaaagcaa 91995


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,812,585
Number of Sequences: 3902068
Number of extensions: 3812585
Number of successful extensions: 67575
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67413
Number of HSP's gapped (non-prelim): 160
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top