Clone Information

BLAST Search Result

Clone Name	rbart19d11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	A115_TOBAC (P40691) Auxin-induced protein PCNT115	121	1e-27
2	YAKC_SCHPO (Q09923) Aldo-keto reductase yakc [NADP+] (EC 1.1.1.-)	73	4e-13
3	IN22_MAIZE (P49249) IN2-2 protein	66	5e-11
4	YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)	52	6e-07
5	PLR1_SCHPO (O14295) Pyridoxal reductase (EC 1.1.1.65) (PL reduct...	52	8e-07
6	YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)	52	1e-06
7	AAD14_YEAST (P42884) Putative aryl-alcohol dehydrogenase AAD14 (...	49	5e-06
8	STCV_EMENI (Q00727) Putative sterigmatocystin biosynthesis dehyd...	49	8e-06
9	AAD4_YEAST (Q07747) Probable aryl-alcohol dehydrogenase AAD4 (EC...	47	2e-05
10	YDJG_ECOLI (P77256) Hypothetical oxidoreductase ydjG (EC 1.-.-.-)	46	4e-05
11	YDBC_ECOLI (P25906) Putative oxidoreductase ydbC (EC 1.-.-.-)	46	5e-05
12	AAD16_YEAST (P43546) Putative aryl-alcohol dehydrogenase AAD16 (...	46	5e-05
13	AAD10_YEAST (P47182) Putative aryl-alcohol dehydrogenase AAD10 (...	45	1e-04
14	YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ	38	0.011
15	AAD_PHACH (Q01752) Aryl-alcohol dehydrogenase [NADP+] (EC 1.1.1....	37	0.025
16	YGHZ_ECOLI (Q46851) Hypothetical protein yghZ	37	0.033
17	AAD3_YEAST (P25612) Putative aryl-alcohol dehydrogenase AAD3 (EC...	37	0.033
18	IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protei...	37	0.033
19	Y2320_MYCBO (P63485) Hypothetical protein Mb2320	37	0.033
20	Y2298_MYCTU (P63484) Hypothetical protein Rv2298/MT2355	37	0.033
21	KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subuni...	35	0.095
22	KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subu...	34	0.16
23	KCAB3_MOUSE (P97382) Voltage-gated potassium channel beta-3 subu...	34	0.21
24	KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subuni...	33	0.28
25	KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subu...	33	0.28
26	KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subu...	32	0.62
27	KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subu...	32	0.62
28	ALDR_HORVU (P23901) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyd...	32	0.62
29	KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subu...	32	0.81
30	MTFA_PSEF5 (Q4KFD4) Putative RNA 2'-O-ribose methyltransferase m...	32	1.1
31	KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subuni...	32	1.1
32	KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subu...	32	1.1
33	KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subu...	32	1.1
34	KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subu...	32	1.1
35	KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subu...	32	1.1
36	KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subu...	32	1.1
37	KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subu...	31	1.4
38	KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subu...	31	1.8
39	NDRG4_XENTR (Q6DIX1) Protein NDRG4	30	3.1
40	EX7L_AGRT5 (Q8UIM4) Probable exodeoxyribonuclease VII large subu...	30	3.1
41	NDR4A_XENLA (Q640Z1) Protein NDRG4-A	30	3.1
42	NDR4B_XENLA (Q6DJD3) Protein NDRG4-B	30	4.0
43	TRPD_COREF (Q8FLJ8) Anthranilate phosphoribosyltransferase (EC 2...	29	5.2
44	GLXK_HAEIN (P44507) Glycerate kinase (EC 2.7.1.31)	29	6.8
45	MTFA_PSEU2 (Q4ZQY7) Putative RNA 2'-O-ribose methyltransferase m...	28	8.9
46	GIDA_XYLFT (Q87DB3) tRNA uridine 5-carboxymethylaminomethyl modi...	28	8.9
47	GIDA_XYLFA (Q9PBN4) tRNA uridine 5-carboxymethylaminomethyl modi...	28	8.9
48	KCAB_ORYSA (Q40648) Probable voltage-gated potassium channel bet...	28	8.9
49	SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1	28	8.9
50	YDG7_SCHPO (Q10494) Probable oxidoreductase C26F1.07 in chromoso...	28	8.9

>A115_TOBAC (P40691) Auxin-induced protein PCNT115|
          Length = 307

 Score =  121 bits (303), Expect = 1e-27
 Identities = 52/77 (67%), Positives = 66/77 (85%)
 Frame = -3

Query: 464 PKLMDTVRDDDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDV 285
           PKL++ + ++D+RK LPRFQ ENL+ N  ++ER+ EMA RKGCT SQLALAWVHH+G DV
Sbjct: 226 PKLLEDMSNEDYRKYLPRFQAENLENNKNLYERICEMAVRKGCTPSQLALAWVHHQGNDV 285

Query: 284 CPIPGTTKVENLNQNVR 234
           CPIPGTTK+ENLNQN++
Sbjct: 286 CPIPGTTKIENLNQNMK 302

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>YAKC_SCHPO (Q09923) Aldo-keto reductase yakc [NADP+] (EC 1.1.1.-)|
          Length = 340

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 37/104 (35%), Positives = 56/104 (53%)
 Frame = -3

Query: 461 KLMDTVRDDDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVC 282
           K  D   + DFR+  PR+Q EN  KN  +  ++ ++A     T  QL+LAW+  +G D+ 
Sbjct: 220 KSPDDFPEGDFRRKAPRYQKENFYKNLELVTKIEKIATANNITPGQLSLAWLLAQGDDIL 279

Query: 281 PIPGTTKVENLNQNVRAMSVQLMVEEMAELESYAAMDAVQGDRY 150
           PIPGT +V+ L +N  A+ V+L    + E+        V G RY
Sbjct: 280 PIPGTKRVKYLEENFGALKVKLSDATVKEIREACDNAEVIGARY 323

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>IN22_MAIZE (P49249) IN2-2 protein|
          Length = 306

 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 27/73 (36%), Positives = 41/73 (56%)
 Frame = -2

Query: 432 FPQEPPKISTRELEEERRYIRACERDGGEEGLHVVAARASLGSPPGNRCVPHTWHDQS*E 253
           F +  P+     L++  +      RDG  E +H + AR  LGSPP  R +PHTWH+++ +
Sbjct: 232 FRKHMPRFQPENLDKNAQIFERVRRDGSTERMHAITARVGLGSPPRKRRLPHTWHNKNRQ 291

Query: 252 FEPERESDVCAAH 214
            +PER   VC A+
Sbjct: 292 LQPERGGTVCEAY 304



 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 461 KLMDTVRDDDFRKNLPRFQPENLKKNAAIFERV 363
           KL+D++ + DFRK++PRFQPENL KNA IFERV
Sbjct: 222 KLVDSLSEQDFRKHMPRFQPENLDKNAQIFERV 254

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>YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)|
          Length = 324

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/84 (35%), Positives = 51/84 (60%)
 Frame = -3

Query: 437 DDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKV 258
           D+  KNL +   EN   +A I ER++ ++   G T +Q+ALAW+  +     PI GT++ 
Sbjct: 233 DEVGKNLYKESDEN---DAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSRE 289

Query: 257 ENLNQNVRAMSVQLMVEEMAELES 186
           E L++ + A+ + L  E++AELE+
Sbjct: 290 EQLDELLNAVDITLKPEQIAELET 313

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>PLR1_SCHPO (O14295) Pyridoxal reductase (EC 1.1.1.65) (PL reductase) (PL-red)|
          Length = 333

 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
 Frame = -3

Query: 458 LMDTVRDDDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTD-VC 282
           L +  +   F + L RF P+   KN    + V ++A + G T  + +L ++   G   V 
Sbjct: 220 LKEFAKSFPFLEYLDRFSPDVFAKNLPFLQAVEQLAKKFGMTMPEFSLLFIMASGNGLVI 279

Query: 281 PIPGTTKVENLNQNVRAMSVQLMVEEMAELESYAAMDAVQGDRYHSTFLNT 129
           PIPG+T V     N+ A++  L  E+  E +   +   + G RY+     T
Sbjct: 280 PIPGSTSVSRTKSNLNALNKSLSPEQFKEAKEVLSKYPIYGLRYNEQLAGT 330

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>YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)|
          Length = 310

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 25/79 (31%), Positives = 44/79 (55%)
 Frame = -3

Query: 437 DDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKV 258
           DDFRK+ P+FQ E    N    +++  +A  K   ++ +ALAW+  R      IPG  + 
Sbjct: 224 DDFRKDKPQFQGETFIHNLKKVDKLKAVAEEKQADTAHVALAWLLTRPAIDAIIPGAKRP 283

Query: 257 ENLNQNVRAMSVQLMVEEM 201
           E L  N++ ++++L  +E+
Sbjct: 284 EQLQDNLKTLNIELTEDEV 302

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>AAD14_YEAST (P42884) Putative aryl-alcohol dehydrogenase AAD14 (EC 1.1.1.-)|
          Length = 376

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -3

Query: 404 PENLKKNAAIFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAM 228
           PE  +    I E ++++A   G  S + +A+A+V  +  +V P+ G  K+E+L QN+ A+
Sbjct: 266 PEQTELEVKISEALTKIAEEHGTESVTAIAIAYVRSKAKNVFPLIGGRKIEHLKQNIEAL 325

Query: 227 SVQLMVEEMAELESYAAMD 171
           S++L  E++  LES    D
Sbjct: 326 SIKLTPEQIEYLESIVPFD 344

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>STCV_EMENI (Q00727) Putative sterigmatocystin biosynthesis dehydrogenase stcV|
           (EC 1.1.1.-)
          Length = 387

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 25/89 (28%), Positives = 49/89 (55%)
 Frame = -3

Query: 437 DDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKV 258
           ++F++   R      +K+  +  +++E+  RKG  ++ +ALA++ H+   V P+ G   V
Sbjct: 244 EEFQQEGTRNMGPQEEKHRLMGAKLTEVGERKGVAAAAIALAYLLHKSPYVFPVIGCRTV 303

Query: 257 ENLNQNVRAMSVQLMVEEMAELESYAAMD 171
           E L  N+ ++ V+L  EE+ E+E     D
Sbjct: 304 EQLEANITSLGVELSDEEIYEIEDTIPFD 332

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>AAD4_YEAST (Q07747) Probable aryl-alcohol dehydrogenase AAD4 (EC 1.1.1.-)|
          Length = 329

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -3

Query: 389 KNAAIFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLM 213
           K   I E ++++A   G  S + +A+A+V  +  +V P+ G  K+E+L QN+ A+S++L 
Sbjct: 225 KEVKISEALAKVAEEHGTESVTAIAIAYVRSKAKNVFPLVGGRKIEHLKQNIEALSIKLT 284

Query: 212 VEEMAELESYAAMD 171
            E++  LES    D
Sbjct: 285 PEQIEYLESIIPFD 298

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>YDJG_ECOLI (P77256) Hypothetical oxidoreductase ydjG (EC 1.-.-.-)|
          Length = 326

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
 Frame = -3

Query: 428 RKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENL 249
           R N   FQ EN+ K   + E+   + AR  CT   LALAW+  +   +  + G T  E +
Sbjct: 239 RANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQV 298

Query: 248 NQNVRAMSVQL------MVEEMAE 195
            +NV A+++ L      ++ EMAE
Sbjct: 299 RENVAALNINLSDADATLMREMAE 322

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>YDBC_ECOLI (P25906) Putative oxidoreductase ydbC (EC 1.-.-.-)|
          Length = 286

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 22/59 (37%), Positives = 37/59 (62%)
 Frame = -3

Query: 365 VSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLMVEEMAELE 189
           +S++AA  G T  Q+ALAW+  R  ++  IPGT+ V +L +N+ A  + L  E ++ L+
Sbjct: 223 LSDVAASLGATPMQVALAWLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLD 281

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>AAD16_YEAST (P43546) Putative aryl-alcohol dehydrogenase AAD16 (EC 1.1.1.-)|
          Length = 152

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -3

Query: 377 IFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLMVEEM 201
           I E ++++A   G  S + +A+A+V  +  +V P+ G  K+E+L QN+ A+S++L  E++
Sbjct: 52  ISEALAKVAEEHGTESVTAIAIAYVRSKAKNVFPLVGGRKIEHLKQNIEALSIKLTPEQI 111

Query: 200 AELESYAAMD 171
             LES    D
Sbjct: 112 KYLESIIPFD 121

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>AAD10_YEAST (P47182) Putative aryl-alcohol dehydrogenase AAD10 (EC 1.1.1.-)|
          Length = 288

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -3

Query: 401 ENLKKNAAIFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMS 225
           E       I E + ++A   G  S + +A+A+V  +   V P+ G  K+E+L QN+ A+S
Sbjct: 179 EQTDMEVKISEALLKVAEEHGTESVTAIAIAYVRSKAKHVFPLVGGRKIEHLKQNIEALS 238

Query: 224 VQLMVEEMAELESYAAMD 171
           ++L  E++  LES    D
Sbjct: 239 IKLTPEQIKYLESIVPFD 256

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>YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ|
          Length = 346

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 18/64 (28%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 365 VSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAM-SVQLMVEEMAELE 189
           ++EMA ++G + +Q+AL+W+         + G ++ E L +NV+A+ ++    EE+A+++
Sbjct: 270 LNEMAQQRGQSMAQMALSWLLKDERVTSVLVGASRAEQLEENVQALNNLTFSTEELAQID 329

Query: 188 SYAA 177
            + A
Sbjct: 330 QHIA 333

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>AAD_PHACH (Q01752) Aryl-alcohol dehydrogenase [NADP+] (EC 1.1.1.91) (AAD)|
          Length = 385

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 23/67 (34%), Positives = 37/67 (55%)
 Frame = -3

Query: 401 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 222
           E  +K +   E+V+E    K  TS  +A+A++  +   V PI G  KVE+L  N+ A+ +
Sbjct: 274 ETERKVSKALEKVAEEIGAKSITS--VAIAYLMQKFPYVFPIVGGRKVEHLYANLEALDI 331

Query: 221 QLMVEEM 201
            L  E+M
Sbjct: 332 SLSPEQM 338

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>YGHZ_ECOLI (Q46851) Hypothetical protein yghZ|
          Length = 346

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 17/64 (26%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 365 VSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAM-SVQLMVEEMAELE 189
           ++EMA ++G + +Q+AL+W+         + G ++ E L +NV+A+ ++    +E+A+++
Sbjct: 270 LNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQID 329

Query: 188 SYAA 177
            + A
Sbjct: 330 QHIA 333

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>AAD3_YEAST (P25612) Putative aryl-alcohol dehydrogenase AAD3 (EC 1.1.1.-)|
          Length = 363

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -3

Query: 377 IFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLMVEEM 201
           I E ++++A   G  S + +A+A+V  +  +  P     K+E+L +N++A+S+ L  + +
Sbjct: 272 ISEALAKIAEEHGTESVTAIAIAYVRSKAKNFFPSVEGGKIEDLKENIKALSIDLTPDNI 331

Query: 200 AELESYAAMD 171
             LES    D
Sbjct: 332 KYLESIVPFD 341

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>IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protein 147)|
           (VEG147) (AKR11A)
          Length = 310

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 21/91 (23%), Positives = 39/91 (42%)
 Frame = -3

Query: 449 TVRDDDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPG 270
           T  + D R     F+ E  K+N     +++ +A +       + LAW   R      IPG
Sbjct: 220 TFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPG 279

Query: 269 TTKVENLNQNVRAMSVQLMVEEMAELESYAA 177
             + + L  N++   V L  E+++ ++   A
Sbjct: 280 AKRADQLIDNIKTADVTLSQEDISFIDKLFA 310

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>Y2320_MYCBO (P63485) Hypothetical protein Mb2320|
          Length = 323

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 24/79 (30%), Positives = 36/79 (45%)
 Frame = -3

Query: 416 PRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNV 237
           P F  ENL++   +   +  +A       +Q+ALAW+      V  IPG + VE L  NV
Sbjct: 223 PLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISL-PGVVAIPGASSVEQLEFNV 281

Query: 236 RAMSVQLMVEEMAELESYA 180
            A  ++L  +    L   A
Sbjct: 282 AAADIELSAQSRDALTDAA 300

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>Y2298_MYCTU (P63484) Hypothetical protein Rv2298/MT2355|
          Length = 323

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 24/79 (30%), Positives = 36/79 (45%)
 Frame = -3

Query: 416 PRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNV 237
           P F  ENL++   +   +  +A       +Q+ALAW+      V  IPG + VE L  NV
Sbjct: 223 PLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISL-PGVVAIPGASSVEQLEFNV 281

Query: 236 RAMSVQLMVEEMAELESYA 180
            A  ++L  +    L   A
Sbjct: 282 AAADIELSAQSRDALTDAA 300

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>KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3) (RCK beta3)
          Length = 404

 Score = 35.0 bits (79), Expect = 0.095
 Identities = 24/90 (26%), Positives = 44/90 (48%)
 Frame = -3

Query: 413 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 234
           + Q E+ KK  A    +  +A + GCT +QLA+AW          + G +  E L +++ 
Sbjct: 317 KVQSEDGKKQQARVTDLLPIAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLG 376

Query: 233 AMSVQLMVEEMAELESYAAMDAVQGDRYHS 144
           ++ V   +     +E    +DA+ G++ HS
Sbjct: 377 SLQVLGQLTPQTVME----IDALLGNKSHS 402

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>KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 404

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 24/90 (26%), Positives = 43/90 (47%)
 Frame = -3

Query: 413 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 234
           + Q E+ KK  A    +  +A + GCT +QLA+AW          + G +  E L +++ 
Sbjct: 317 KVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLIEHLG 376

Query: 233 AMSVQLMVEEMAELESYAAMDAVQGDRYHS 144
           A+ V   +     +E    +D + G++ HS
Sbjct: 377 ALQVLSQLTPQTVME----IDGLLGNKPHS 402

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>KCAB3_MOUSE (P97382) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 249

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 24/90 (26%), Positives = 41/90 (45%)
 Frame = -3

Query: 413 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 234
           + Q E  KK  A    +   A + GCT  QLA+AW          + G +  E L +++ 
Sbjct: 162 KVQSEEGKKQQARVMDLLPTARQLGCTVGQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLG 221

Query: 233 AMSVQLMVEEMAELESYAAMDAVQGDRYHS 144
           ++ V   +     +E    +DA+ G++ HS
Sbjct: 222 SLQVLSQLTPQTVVE----IDALLGNKSHS 247

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>KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 401 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 222
           E  ++  A  + +  +A R GCT  QLA+AW          + G +  E L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQV 339

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>KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2) (Neuroimmune protein
           F5)
          Length = 367

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 401 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 222
           E  ++  A  + +  +A R GCT  QLA+AW          + G +  E L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQV 339

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>KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2) (HKvbeta2)
          Length = 367

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -3

Query: 401 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 222
           E  ++  A  + +  +A R GCT  QLA+AW          + G +  + L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQV 339

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>KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -3

Query: 401 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 222
           E  ++  A  + +  +A R GCT  QLA+AW          + G +  + L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASSADQLMENIGAIQV 339

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>ALDR_HORVU (P23901) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde reductase)|
          Length = 320

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = -3

Query: 392 KKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLM 213
           +KN A    V ++A +   T  Q+ + W   RGT V  IP ++K E + +N++    ++ 
Sbjct: 221 EKNLAHDPVVEKVANKLNKTPGQVLIKWALQRGTSV--IPKSSKDERIKENIQVFGWEIP 278

Query: 212 VEEMAEL 192
            E+   L
Sbjct: 279 EEDFKVL 285

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>KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -3

Query: 401 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 222
           E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ A+ V
Sbjct: 314 EEGRKQQTKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSNPEQLIENLGAIQV 373

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>MTFA_PSEF5 (Q4KFD4) Putative RNA 2'-O-ribose methyltransferase mtfA (EC|
           2.1.1.-)
          Length = 357

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -2

Query: 441 RRRFPQEPPKISTRELEEERRYIRACERDGGEEGLHVVAARASLGSPPG 295
           R +FP+E P  ST +LEE   +     RD  +E LH       LG+ PG
Sbjct: 172 RLKFPREAPSRSTLKLEEAWHHF--IPRDQWDERLHGDMTGVDLGAAPG 218

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>KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -3

Query: 413 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 234
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 310 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 369

Query: 233 AMSV 222
           A+ V
Sbjct: 370 AIQV 373

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>KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -3

Query: 413 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 234
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 328 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 387

Query: 233 AMSV 222
           A+ V
Sbjct: 388 AIQV 391

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>KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -3

Query: 413 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 234
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 310 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 369

Query: 233 AMSV 222
           A+ V
Sbjct: 370 AIQV 373

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>KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -3

Query: 413 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 234
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 328 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 387

Query: 233 AMSV 222
           A+ V
Sbjct: 388 AIQV 391

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>KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -3

Query: 413 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 234
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 310 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 369

Query: 233 AMSV 222
           A+ V
Sbjct: 370 AIQV 373

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>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 408

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -3

Query: 413 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 234
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 317 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 376

Query: 233 AMSV 222
           A+ V
Sbjct: 377 AIQV 380

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>KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -3

Query: 401 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 222
           E  ++  A  +    +A R GCT  QLA+AW          + G +  + L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKEFQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLLENIGAIQV 339

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>KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 401

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -3

Query: 392 KKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 222
           KK  +  + +  +A R  CT +QLA+AW          + G + +E L +N+ A+ V
Sbjct: 317 KKQHSKVKELHPIADRLNCTVTQLAIAWCLRSEGVSSVLLGVSNIEQLLENLGAIQV 373

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>NDRG4_XENTR (Q6DIX1) Protein NDRG4|
          Length = 405

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = -2

Query: 435 RFPQEPPKISTR--ELEEERRYIRACERDGGEEG-------LHVVAARASLGSPPGNRCV 283
           RFP+E P +  +  E+E    ++ A + D  E         LHVV      G+P GNR  
Sbjct: 28  RFPEEKPLLRGQDTEMESADTFLSAADTDWKEHDIETPYGMLHVVIR----GTPKGNRPA 83

Query: 282 PHTWHD 265
             T+HD
Sbjct: 84  ILTYHD 89

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>EX7L_AGRT5 (Q8UIM4) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 532

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 38  DTKHQHSDRFP*YPVKWLSRMRGEGS 115
           D  H+ SDRFP + V W  +++GEGS
Sbjct: 162 DILHRISDRFPVHVVVWPVKVQGEGS 187

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>NDR4A_XENLA (Q640Z1) Protein NDRG4-A|
          Length = 390

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = -2

Query: 435 RFPQEPPKISTR--ELEEERRYIRACERDGGEEG-------LHVVAARASLGSPPGNRCV 283
           RFP+E P +  +  E+E    ++ A + D  E         LHVV      G+P GNR  
Sbjct: 28  RFPEEKPLLRGQDTEMESADTFLSAADTDWKEHDIETPYGMLHVVIR----GTPKGNRPA 83

Query: 282 PHTWHD 265
             T+HD
Sbjct: 84  ILTYHD 89

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>NDR4B_XENLA (Q6DJD3) Protein NDRG4-B|
          Length = 367

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = -2

Query: 435 RFPQEPPKISTR--ELEEERRYIRACERDGGEEG-------LHVVAARASLGSPPGNRCV 283
           RFP+E P +  +  E+E    ++ A + D  E         LHVV      G+P GNR  
Sbjct: 5   RFPEEKPLLRGQDTEMESADTFMSAADTDWKEHDIETPYGMLHVVIR----GTPKGNRPA 60

Query: 282 PHTWHD 265
             T+HD
Sbjct: 61  ILTYHD 66

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>TRPD_COREF (Q8FLJ8) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 342

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -3

Query: 308 VHHRGTDVCPIPGTTKVENLNQNVRAMSVQLMVEEMAELESYAAMDAVQGD 156
           VH  GTD   + GTT+V  L  +   +S ++  EE+  +E     D V GD
Sbjct: 222 VHGAGTDEIAVHGTTQVWELKADGEIISYEITPEELG-VERCDLTDLVGGD 271

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>GLXK_HAEIN (P44507) Glycerate kinase (EC 2.7.1.31)|
          Length = 378

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 84  SGFPG*EGRGLGVLPGVEERAVVPIALDRIH 176
           +G  G  G GL +LP V+ +A + I LDR+H
Sbjct: 247 AGAAGGMGGGLLLLPSVQLKAGIQIVLDRLH 277

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>MTFA_PSEU2 (Q4ZQY7) Putative RNA 2'-O-ribose methyltransferase mtfA (EC|
           2.1.1.-)
          Length = 357

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 441 RRRFPQEPPKISTRELEEERRYIRACERDGGEEGLHVVAARASLGSPPG 295
           R +FP+E P  ST +LEE   +     RD  +E L        LG+ PG
Sbjct: 172 RLKFPREAPSRSTLKLEEAWHHF--IPRDQWDERLSGDMTSVDLGAAPG 218

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>GIDA_XYLFT (Q87DB3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
 Frame = -1

Query: 184 TPPWMRSKAIGTTARSSTPGRTPRPL-------PSHPGKPLNWISR 68
           TPP +  + +  TA    PG  PRP         SHP +   WI++
Sbjct: 202 TPPRIDGRTLNYTAMQEQPGDAPRPTMSFIGNSASHPPQVSCWITQ 247

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>GIDA_XYLFA (Q9PBN4) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
 Frame = -1

Query: 184 TPPWMRSKAIGTTARSSTPGRTPRPL-------PSHPGKPLNWISR 68
           TPP +  + +  TA    PG  PRP         SHP +   WI++
Sbjct: 202 TPPRIDGRTLNYTAMQEQPGDAPRPTMSFIGNSASHPPQVSCWITQ 247

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>KCAB_ORYSA (Q40648) Probable voltage-gated potassium channel beta subunit|
           (K(+) channel beta subunit)
          Length = 328

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 356 MAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 222
           +A+  G + +QLA+AW          I G TK   + +N++A+ V
Sbjct: 257 IASELGVSLAQLAIAWCASNPNVSSVITGATKENQIVENMKALDV 301

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>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1|
          Length = 881

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
 Frame = -2

Query: 399 ELEEERRYIRACERDGGEEGL---HVVAARASLGSPPGNRCVPHTWHDQS*EFEPERESD 229
           E EE+    +      GE+G      +A  A LG PPG R    T  +   E + E E D
Sbjct: 624 EEEEDEEEAQGSGESDGEDGAWQGSQLARGARLGQPPGVRSGGSTDSEDEEEEDEEEEED 683

Query: 228 V----CAAHG 211
                CAA G
Sbjct: 684 EEGIGCAARG 693

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>YDG7_SCHPO (Q10494) Probable oxidoreductase C26F1.07 in chromosome I (EC|
           1.-.-.-)
          Length = 321

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -3

Query: 371 ERVSEMAARKG--CTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLMVEEMA 198
           E + ++A  KG   T + +A++W   RGT V  IP +   + +  N +   + L  E+M 
Sbjct: 236 ETIQKIAKSKGEGVTGATIAVSWAITRGTSV--IPKSVNEQRIKSNFK--YIPLTKEDMD 291

Query: 197 ELES 186
           E+ S
Sbjct: 292 EINS 295


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,385,162
Number of Sequences: 219361
Number of extensions: 1309047
Number of successful extensions: 4642
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 4305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4640
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result