ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart19d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein) 88 1e-17
2ERD10_ARATH (P42759) Dehydrin ERD10 (Low-temperature-induced pro... 35 0.082
3COR47_ARATH (P31168) Dehydrin COR47 (Cold-induced COR47 protein) 34 0.24
4ERD14_ARATH (P42763) Dehydrin ERD14 32 0.70
5UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Unco... 32 0.91
6PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A me... 31 2.0
7TAS14_LYCES (P22240) Abscisic acid and environmental stress-indu... 30 2.7
8DHLEA_ARATH (Q96261) Probable dehydrin LEA 30 3.5
9ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44 30 4.5
10DHR21_ORYSA (P12253) Water stress-inducible protein Rab21 30 4.5
11K10_DROME (P13468) DNA-binding protein K10 (Female sterile prote... 29 7.7
12TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) ... 29 7.7
13DHN3_HORVU (P12948) Dehydrin DHN3 (B17) 29 7.7
14COBL6_ARATH (O04500) COBRA-like protein 6 precursor 29 7.7

>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)|
          Length = 262

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 42/47 (89%), Positives = 43/47 (91%)
 Frame = -1

Query: 488 AAEEVSSPDAKEKKGLLGKTMDKLPGYHKTGEEDKAAAPSGEHKPRA 348
           A EEVSSPDAKEKKGLLGK MDKLPGYHKTGEEDKAAA +GEHKP A
Sbjct: 216 APEEVSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAATGEHKPSA 262



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>ERD10_ARATH (P42759) Dehydrin ERD10 (Low-temperature-induced protein LTI45)|
          Length = 260

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 5/37 (13%)
 Frame = -1

Query: 479 EVSSPDA---KEKKGLLGKTMDKLPGYH--KTGEEDK 384
           E ++P A   +EKKG + K  +KLPGYH   TGEE+K
Sbjct: 218 ETATPIADIPEEKKGFMDKIKEKLPGYHAKTTGEEEK 254



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 479 EVSSPDAKEKKGLLGKTMDKLPGYHKTGEEDK 384
           E   P+ +EKKG + K  +KLPG+ K  E+ +
Sbjct: 178 EDHKPEEEEKKGFMDKIKEKLPGHSKKPEDSQ 209



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>COR47_ARATH (P31168) Dehydrin COR47 (Cold-induced COR47 protein)|
          Length = 265

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 16/25 (64%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
 Frame = -1

Query: 458 KEKKGLLGKTMDKLPGYH-KTGEED 387
           +EKKG+L K  +KLPGYH KT EE+
Sbjct: 232 EEKKGILEKIKEKLPGYHAKTTEEE 256



 Score = 33.1 bits (74), Expect = 0.41
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 458 KEKKGLLGKTMDKLPGYHKTGEEDKAAAPS 369
           +EKKGL+ K  +KLPG+H    ED  A  S
Sbjct: 181 EEKKGLVEKIKEKLPGHHDEKAEDSPAVTS 210



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
 Frame = -1

Query: 458 KEKKGLLGKTMDKLPGYH-KTGEED 387
           ++KKGL+ K  +KLPG+H KT E+D
Sbjct: 134 EDKKGLVEKIKEKLPGHHDKTAEDD 158



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>ERD14_ARATH (P42763) Dehydrin ERD14|
          Length = 185

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 16/26 (61%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
 Frame = -1

Query: 455 EKKGLLGKTMDKLPGYH--KTGEEDK 384
           EKKG+L K  +KLPGYH   T EE+K
Sbjct: 156 EKKGILEKIKEKLPGYHPKTTVEEEK 181



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -1

Query: 458 KEKKGLLGKTMDKLPGYHKTGEEDKAAAPSGEHKPRA*SPPCPETH 321
           +EKKG + K  +KLPG HK  E+  A A +    P    PP  E H
Sbjct: 113 EEKKGFMEKLKEKLPG-HKKPEDGSAVAAA----PVVVPPPVEEAH 153



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>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -1

Query: 488  AAEEVSSPDAKEKKGLLGKTMDKLPG--YHKTGEEDKAAAPSGEHKPRA*SPPCPE 327
            AAEEV SP  KEK        +K P     KTG+E K  +P      +  SP  PE
Sbjct: 1423 AAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPE 1478



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>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 142 HPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPS*HGLKLKANTTHA 297
           HP P S P+  P+    H HP P+ +  P  Q  S P   HG +L  +T+++
Sbjct: 213 HPHPHSHPHSHPHP---HPHPHPHQIPHPHPQPHSQP---HGHRLLRSTSNS 258



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>TAS14_LYCES (P22240) Abscisic acid and environmental stress-inducible protein|
           TAS14 (Dehydrin TAS14)
          Length = 130

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
 Frame = -1

Query: 488 AAEEVSSPDAKEKKGLLGKTMDKLPGYHK------TGEEDK 384
           ++ E      + KKGL  K M+K+PG H+      TGEE K
Sbjct: 76  SSSEDDGEGGRRKKGLKEKIMEKMPGQHEGEYGQTTGEEKK 116



 Score = 28.9 bits (63), Expect = 7.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 479 EVSSPDAKEKKGLLGKTMDKLPGYH 405
           E      +EKKG++ K  DK+PG H
Sbjct: 106 EYGQTTGEEKKGMMDKIKDKIPGMH 130



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>DHLEA_ARATH (Q96261) Probable dehydrin LEA|
          Length = 185

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 455 EKKGLLGKTMDKLPGYH 405
           EKKG+L K  DKLPG+H
Sbjct: 164 EKKGILEKIKDKLPGHH 180



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>ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44|
          Length = 258

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = -1

Query: 452 KKGLLGKTMDKLPGYH-KTGEEDK 384
           KKG+L K  +K+PGYH KT  E++
Sbjct: 182 KKGILEKIKEKIPGYHPKTSTEEE 205



 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 482 EEVSSPDAKEKKGLLGKTMDKLPGYHKTGEEDKAAAP 372
           E V+ P+  +KKG + K  +KLPG  K  EE+  A P
Sbjct: 130 EVVTEPE--KKKGFMEKIKEKLPGGGKKVEEETVAPP 164



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>DHR21_ORYSA (P12253) Water stress-inducible protein Rab21|
          Length = 172

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 485 AEEVSSPDAKEKKGLLGKTMDKLPGYH 405
           A   ++ D  EKKG++ K  +KLPG H
Sbjct: 146 AHGTTTTDTGEKKGIMDKIKEKLPGQH 172



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>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)|
          Length = 463

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 130 KLKQHPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPS 258
           K +QHP P+     SP  Q   +HPSPN    P   ++  P S
Sbjct: 126 KQQQHPSPNQQQPPSPNQQ---QHPSPNQQQHPSPNQQQHPNS 165



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>TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 101 TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 214
           T    NN+   L+ +QD+ L Q  A +  ++ +I+HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAIQHLT 242



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>DHN3_HORVU (P12948) Dehydrin DHN3 (B17)|
          Length = 161

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 488 AAEEVSSPDAKEKKGLLGKTMDKLPGYHKTGEEDKAAAPSGEH 360
           ++ E      + KKGL  K  +KLPG H  G++ +     G+H
Sbjct: 64  SSSEDDGMGGRRKKGLKDKIKEKLPGGH--GDQQQTGGTYGQH 104



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>COBL6_ARATH (O04500) COBRA-like protein 6 precursor|
          Length = 454

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 191 SVWVYGLQFGPESGPGCCLSLFAYYYGHFV 102
           +V VY  QF     P CC+SL A+YY + V
Sbjct: 217 AVCVYS-QFRSSPSPKCCVSLSAFYYQNIV 245


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,317,500
Number of Sequences: 219361
Number of extensions: 1475026
Number of successful extensions: 3942
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3939
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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