Clone Name | rbart19d10 |
---|---|
Clone Library Name | barley_pub |
>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)| Length = 262 Score = 88.2 bits (217), Expect = 1e-17 Identities = 42/47 (89%), Positives = 43/47 (91%) Frame = -1 Query: 488 AAEEVSSPDAKEKKGLLGKTMDKLPGYHKTGEEDKAAAPSGEHKPRA 348 A EEVSSPDAKEKKGLLGK MDKLPGYHKTGEEDKAAA +GEHKP A Sbjct: 216 APEEVSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAATGEHKPSA 262
>ERD10_ARATH (P42759) Dehydrin ERD10 (Low-temperature-induced protein LTI45)| Length = 260 Score = 35.4 bits (80), Expect = 0.082 Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 5/37 (13%) Frame = -1 Query: 479 EVSSPDA---KEKKGLLGKTMDKLPGYH--KTGEEDK 384 E ++P A +EKKG + K +KLPGYH TGEE+K Sbjct: 218 ETATPIADIPEEKKGFMDKIKEKLPGYHAKTTGEEEK 254 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -1 Query: 479 EVSSPDAKEKKGLLGKTMDKLPGYHKTGEEDK 384 E P+ +EKKG + K +KLPG+ K E+ + Sbjct: 178 EDHKPEEEEKKGFMDKIKEKLPGHSKKPEDSQ 209
>COR47_ARATH (P31168) Dehydrin COR47 (Cold-induced COR47 protein)| Length = 265 Score = 33.9 bits (76), Expect = 0.24 Identities = 16/25 (64%), Positives = 20/25 (80%), Gaps = 1/25 (4%) Frame = -1 Query: 458 KEKKGLLGKTMDKLPGYH-KTGEED 387 +EKKG+L K +KLPGYH KT EE+ Sbjct: 232 EEKKGILEKIKEKLPGYHAKTTEEE 256 Score = 33.1 bits (74), Expect = 0.41 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -1 Query: 458 KEKKGLLGKTMDKLPGYHKTGEEDKAAAPS 369 +EKKGL+ K +KLPG+H ED A S Sbjct: 181 EEKKGLVEKIKEKLPGHHDEKAEDSPAVTS 210 Score = 31.6 bits (70), Expect = 1.2 Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%) Frame = -1 Query: 458 KEKKGLLGKTMDKLPGYH-KTGEED 387 ++KKGL+ K +KLPG+H KT E+D Sbjct: 134 EDKKGLVEKIKEKLPGHHDKTAEDD 158
>ERD14_ARATH (P42763) Dehydrin ERD14| Length = 185 Score = 32.3 bits (72), Expect = 0.70 Identities = 16/26 (61%), Positives = 19/26 (73%), Gaps = 2/26 (7%) Frame = -1 Query: 455 EKKGLLGKTMDKLPGYH--KTGEEDK 384 EKKG+L K +KLPGYH T EE+K Sbjct: 156 EKKGILEKIKEKLPGYHPKTTVEEEK 181 Score = 31.6 bits (70), Expect = 1.2 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -1 Query: 458 KEKKGLLGKTMDKLPGYHKTGEEDKAAAPSGEHKPRA*SPPCPETH 321 +EKKG + K +KLPG HK E+ A A + P PP E H Sbjct: 113 EEKKGFMEKLKEKLPG-HKKPEDGSAVAAA----PVVVPPPVEEAH 153
>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein| 89) Length = 8081 Score = 32.0 bits (71), Expect = 0.91 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = -1 Query: 488 AAEEVSSPDAKEKKGLLGKTMDKLPG--YHKTGEEDKAAAPSGEHKPRA*SPPCPE 327 AAEEV SP KEK +K P KTG+E K +P + SP PE Sbjct: 1423 AAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPE 1478
>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell| death-associated gene 51 protein) (Apoptosis-associated nuclear protein) (Proline- and histidine-rich protein) (Proline- and glutamine-rich protein) (PQ-rich protein) Length = 259 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 142 HPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPS*HGLKLKANTTHA 297 HP P S P+ P+ H HP P+ + P Q S P HG +L +T+++ Sbjct: 213 HPHPHSHPHSHPHP---HPHPHPHQIPHPHPQPHSQP---HGHRLLRSTSNS 258
>TAS14_LYCES (P22240) Abscisic acid and environmental stress-inducible protein| TAS14 (Dehydrin TAS14) Length = 130 Score = 30.4 bits (67), Expect = 2.7 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%) Frame = -1 Query: 488 AAEEVSSPDAKEKKGLLGKTMDKLPGYHK------TGEEDK 384 ++ E + KKGL K M+K+PG H+ TGEE K Sbjct: 76 SSSEDDGEGGRRKKGLKEKIMEKMPGQHEGEYGQTTGEEKK 116 Score = 28.9 bits (63), Expect = 7.7 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 479 EVSSPDAKEKKGLLGKTMDKLPGYH 405 E +EKKG++ K DK+PG H Sbjct: 106 EYGQTTGEEKKGMMDKIKDKIPGMH 130
>DHLEA_ARATH (Q96261) Probable dehydrin LEA| Length = 185 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -1 Query: 455 EKKGLLGKTMDKLPGYH 405 EKKG+L K DKLPG+H Sbjct: 164 EKKGILEKIKDKLPGHH 180
>ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44| Length = 258 Score = 29.6 bits (65), Expect = 4.5 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Frame = -1 Query: 452 KKGLLGKTMDKLPGYH-KTGEEDK 384 KKG+L K +K+PGYH KT E++ Sbjct: 182 KKGILEKIKEKIPGYHPKTSTEEE 205 Score = 29.6 bits (65), Expect = 4.5 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -1 Query: 482 EEVSSPDAKEKKGLLGKTMDKLPGYHKTGEEDKAAAP 372 E V+ P+ +KKG + K +KLPG K EE+ A P Sbjct: 130 EVVTEPE--KKKGFMEKIKEKLPGGGKKVEEETVAPP 164
>DHR21_ORYSA (P12253) Water stress-inducible protein Rab21| Length = 172 Score = 29.6 bits (65), Expect = 4.5 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -1 Query: 485 AEEVSSPDAKEKKGLLGKTMDKLPGYH 405 A ++ D EKKG++ K +KLPG H Sbjct: 146 AHGTTTTDTGEKKGIMDKIKEKLPGQH 172
>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)| Length = 463 Score = 28.9 bits (63), Expect = 7.7 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +1 Query: 130 KLKQHPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPS 258 K +QHP P+ SP Q +HPSPN P ++ P S Sbjct: 126 KQQQHPSPNQQQPPSPNQQ---QHPSPNQQQHPSPNQQQHPNS 165
>TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 303 Score = 28.9 bits (63), Expect = 7.7 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +2 Query: 101 TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 214 T NN+ L+ +QD+ L Q A + ++ +I+HLT Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAIQHLT 242
>DHN3_HORVU (P12948) Dehydrin DHN3 (B17)| Length = 161 Score = 28.9 bits (63), Expect = 7.7 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -1 Query: 488 AAEEVSSPDAKEKKGLLGKTMDKLPGYHKTGEEDKAAAPSGEH 360 ++ E + KKGL K +KLPG H G++ + G+H Sbjct: 64 SSSEDDGMGGRRKKGLKDKIKEKLPGGH--GDQQQTGGTYGQH 104
>COBL6_ARATH (O04500) COBRA-like protein 6 precursor| Length = 454 Score = 28.9 bits (63), Expect = 7.7 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -1 Query: 191 SVWVYGLQFGPESGPGCCLSLFAYYYGHFV 102 +V VY QF P CC+SL A+YY + V Sbjct: 217 AVCVYS-QFRSSPSPKCCVSLSAFYYQNIV 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,317,500 Number of Sequences: 219361 Number of extensions: 1475026 Number of successful extensions: 3942 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3769 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3939 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)